RNA–Protein interactions for RNA: ENSMUST00000057767.4

Upk1b-201, Transcript of Uroplakin-1b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk1b, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1b-201ENSMUST00000057767 Gm35339A0A140LHH9 1649 aa20.09■□□□□ 0.81
Upk1b-201ENSMUST00000057767 NischQ80TM9 1593 aa19.86■□□□□ 0.77
Upk1b-201ENSMUST00000057767 Abcc9P70170 1546 aa19.31■□□□□ 0.68
Upk1b-201ENSMUST00000057767 Abcc8B2RUS7 1588 aa19.2■□□□□ 0.66
Upk1b-201ENSMUST00000057767 Rtl1Q7M732 1744 aa18.72■□□□□ 0.59
Upk1b-201ENSMUST00000057767 ScribQ80U72 1612 aa18.51■□□□□ 0.55
Upk1b-201ENSMUST00000057767 Rhox8Q6VSS7 320 aa18.35■□□□□ 0.53
Upk1b-201ENSMUST00000057767 Ccdc180J3QNE4 1664 aa18.28■□□□□ 0.52
Upk1b-201ENSMUST00000057767 Kdm5dQ62240 1548 aa17.89■□□□□ 0.45
Upk1b-201ENSMUST00000057767 NacadQ5SWP3 1504 aa17.85■□□□□ 0.45
Upk1b-201ENSMUST00000057767 Zcchc6Q5BLK4 1491 aaKnown RBP17.73■□□□□ 0.43
Upk1b-201ENSMUST00000057767 Dcaf1Q80TR8 1506 aa17.65■□□□□ 0.42
Upk1b-201ENSMUST00000057767 Sycp2Q9CUU3 1500 aa17.52■□□□□ 0.4
Upk1b-201ENSMUST00000057767 Rpgrip1Q9EPQ2 1331 aa17.5■□□□□ 0.39
Upk1b-201ENSMUST00000057767 Rb1cc1Q9ESK9 1588 aa17.42■□□□□ 0.38
Upk1b-201ENSMUST00000057767 BicraF8VPZ9 1578 aa17.31■□□□□ 0.36
Upk1b-201ENSMUST00000057767 Baz1aO88379 1555 aa17.24■□□□□ 0.35
Upk1b-201ENSMUST00000057767 HrcG5E8J6 738 aa17.2■□□□□ 0.34
Upk1b-201ENSMUST00000057767 Acin1Q9JIX8 1338 aaKnown RBP17.05■□□□□ 0.32
Upk1b-201ENSMUST00000057767 Ube2uB1AUC4 352 aa17■□□□□ 0.31
Upk1b-201ENSMUST00000057767 Crybg2B7ZCC2 1516 aa16.95■□□□□ 0.3
Upk1b-201ENSMUST00000057767 Ccdc136Q3TVA9 1136 aa16.93■□□□□ 0.3
Upk1b-201ENSMUST00000057767 Smarca2Q6DIC0 1577 aa16.86■□□□□ 0.29
Upk1b-201ENSMUST00000057767 Dnajc5bQ9CQ94 199 aa16.74■□□□□ 0.27
Upk1b-201ENSMUST00000057767 Pds5bQ4VA53 1446 aaKnown RBP16.72■□□□□ 0.27
Upk1b-201ENSMUST00000057767 Trim41Q5NCC3 630 aa16.72■□□□□ 0.27
Upk1b-201ENSMUST00000057767 Cep164Q5DU05 1446 aa16.7■□□□□ 0.26
Upk1b-201ENSMUST00000057767 Ehmt2Q9Z148 1263 aaKnown RBP16.67■□□□□ 0.26
Upk1b-201ENSMUST00000057767 Thoc2B1AZI6 1594 aaKnown RBP16.61■□□□□ 0.25
Upk1b-201ENSMUST00000057767 Atad2bE9Q166 1460 aaKnown RBP16.6■□□□□ 0.25
Upk1b-201ENSMUST00000057767 Cecr2E9Q2Z1 1453 aa16.55■□□□□ 0.24
Upk1b-201ENSMUST00000057767 Smarca4Q3TKT4 1613 aaKnown RBP16.51■□□□□ 0.23
Upk1b-201ENSMUST00000057767 Brd4Q9ESU6 1400 aaKnown RBP16.43■□□□□ 0.22
Upk1b-201ENSMUST00000057767 Iqgap2Q3UQ44 1575 aa16.42■□□□□ 0.22
Upk1b-201ENSMUST00000057767 Ercc6F8VPZ5 1481 aa16.37■□□□□ 0.21
Upk1b-201ENSMUST00000057767 Cc2d2aQ8CFW7 1633 aa16.34■□□□□ 0.21
Upk1b-201ENSMUST00000057767 Pcgf6Q99NA9 353 aa16.33■□□□□ 0.21
Upk1b-201ENSMUST00000057767 Rsf1E9PWW9 1441 aaKnown RBP16.32■□□□□ 0.2
Upk1b-201ENSMUST00000057767 Golga3P55937 1487 aa16.29■□□□□ 0.2
Upk1b-201ENSMUST00000057767 Wdr62Q3U3T8 1523 aa16.28■□□□□ 0.2
Upk1b-201ENSMUST00000057767 Frmpd1A2AKB4 1549 aa16.26■□□□□ 0.19
Upk1b-201ENSMUST00000057767 Synj1Q8CHC4 1574 aa16.26■□□□□ 0.19
Upk1b-201ENSMUST00000057767 Cngb1E1AZ71 1325 aa16.25■□□□□ 0.19
Upk1b-201ENSMUST00000057767 Fam135aQ6NS59 1506 aa16.24■□□□□ 0.19
Upk1b-201ENSMUST00000057767 Chic1Q8CBW7 227 aa16.18■□□□□ 0.18
Upk1b-201ENSMUST00000057767 Top2bQ64511 1612 aa16.18■□□□□ 0.18
Upk1b-201ENSMUST00000057767 Ccdc88bQ4QRL3 1481 aa16.17■□□□□ 0.18
Upk1b-201ENSMUST00000057767 CftrP26361 1476 aa16.16■□□□□ 0.18
Upk1b-201ENSMUST00000057767 Cttnbp2B9EJA2 1648 aa16.14■□□□□ 0.17
Upk1b-201ENSMUST00000057767 Phldb1Q6PDH0 1371 aaKnown RBP16.1■□□□□ 0.17
Upk1b-201ENSMUST00000057767 Gab3Q8BSM5 595 aa16.08■□□□□ 0.17
Upk1b-201ENSMUST00000057767 Unc13aQ4KUS2 1712 aa16.04■□□□□ 0.16
Upk1b-201ENSMUST00000057767 NefmP08553 848 aa16.03■□□□□ 0.16
Upk1b-201ENSMUST00000057767 Supt5hO55201 1082 aaKnown RBP16.01■□□□□ 0.15
Upk1b-201ENSMUST00000057767 Baz1bQ9Z277 1479 aa15.96■□□□□ 0.15
Upk1b-201ENSMUST00000057767 Esf1Q3V1V3 845 aaKnown RBP15.95■□□□□ 0.14
Upk1b-201ENSMUST00000057767 Ubl4bQ9CQ84 188 aa15.93■□□□□ 0.14
Upk1b-201ENSMUST00000057767 Mier1Q5UAK0 511 aa15.88■□□□□ 0.13
Upk1b-201ENSMUST00000057767 Fmn1Q05860 1466 aa15.87■□□□□ 0.13
Upk1b-201ENSMUST00000057767 Rapgef2Q8CHG7 1496 aa15.86■□□□□ 0.13
Upk1b-201ENSMUST00000057767 Top2aQ01320 1528 aaKnown RBP15.84■□□□□ 0.13
Upk1b-201ENSMUST00000057767 Mrc2Q64449 1479 aa15.84■□□□□ 0.13
Upk1b-201ENSMUST00000057767 Zeb1Q64318 1117 aa15.8■□□□□ 0.12
Upk1b-201ENSMUST00000057767 Cep162Q6ZQ06 1403 aa15.69■□□□□ 0.1
Upk1b-201ENSMUST00000057767 Kif15Q6P9L6 1387 aa15.67■□□□□ 0.1
Upk1b-201ENSMUST00000057767 Cux2P70298 1426 aa15.66■□□□□ 0.1
Upk1b-201ENSMUST00000057767 Lamc3Q9R0B6 1581 aa15.65■□□□□ 0.1
Upk1b-201ENSMUST00000057767 Eif4g1Q6NZJ6 1600 aaKnown RBP15.65■□□□□ 0.1
Upk1b-201ENSMUST00000057767 Neurod1Q60867 357 aa15.63■□□□□ 0.09
Upk1b-201ENSMUST00000057767 TnnQ80Z71 1560 aa15.6■□□□□ 0.09
Upk1b-201ENSMUST00000057767 Sall2Q9QX96 1004 aa15.59■□□□□ 0.09
Upk1b-201ENSMUST00000057767 Las1lA2BE28 776 aaKnown RBP15.58■□□□□ 0.08
Upk1b-201ENSMUST00000057767 UbtfP25976 765 aaKnown RBP15.58■□□□□ 0.08
Upk1b-201ENSMUST00000057767 Kif21aQ9QXL2 1672 aa15.54■□□□□ 0.08
Upk1b-201ENSMUST00000057767 Lrriq1Q0P5X1 1673 aa15.51■□□□□ 0.07
Upk1b-201ENSMUST00000057767 Myt1lP97500 1187 aa15.48■□□□□ 0.07
Upk1b-201ENSMUST00000057767 Npm2Q80W85 207 aa15.48■□□□□ 0.07
Upk1b-201ENSMUST00000057767 Clip1Q922J3 1391 aa15.45■□□□□ 0.06
Upk1b-201ENSMUST00000057767 Npm1Q61937 292 aaKnown RBP15.43■□□□□ 0.06
Upk1b-201ENSMUST00000057767 ClspnQ80YR7 1315 aa15.43■□□□□ 0.06
Upk1b-201ENSMUST00000057767 Wdr66E9Q743 1299 aa15.42■□□□□ 0.06
Upk1b-201ENSMUST00000057767 Ncapd3Q6ZQK0 1506 aa15.41■□□□□ 0.06
Upk1b-201ENSMUST00000057767 Anks4bQ8K3X6 423 aa15.39■□□□□ 0.05
Upk1b-201ENSMUST00000057767 Camsap1A2AHC3 1581 aa15.39■□□□□ 0.05
Upk1b-201ENSMUST00000057767 NrkQ9R0G8 1455 aa15.39■□□□□ 0.05
Upk1b-201ENSMUST00000057767 Ccdc18Q640L5 1455 aa15.38■□□□□ 0.05
Upk1b-201ENSMUST00000057767 Arhgap35Q91YM2 1499 aa15.38■□□□□ 0.05
Upk1b-201ENSMUST00000057767 TonslQ6NZL6 1363 aa15.37■□□□□ 0.05
Upk1b-201ENSMUST00000057767 Il27Q8K3I6 234 aa15.36■□□□□ 0.05
Upk1b-201ENSMUST00000057767 Aebp2Q9Z248 504 aaKnown RBP15.35■□□□□ 0.05
Upk1b-201ENSMUST00000057767 Dhx29Q6PGC1 1365 aaKnown RBP15.34■□□□□ 0.05
Upk1b-201ENSMUST00000057767 Map3k1P53349 1493 aa15.32■□□□□ 0.04
Upk1b-201ENSMUST00000057767 LrpprcQ6PB66 1392 aaKnown RBP15.31■□□□□ 0.04
Upk1b-201ENSMUST00000057767 Eea1Q8BL66 1411 aa15.31■□□□□ 0.04
Upk1b-201ENSMUST00000057767 Plekhg3Q4VAC9 1341 aa15.3■□□□□ 0.04
Upk1b-201ENSMUST00000057767 Urb2E9Q7L1 1524 aaKnown RBP15.3■□□□□ 0.04
Upk1b-201ENSMUST00000057767 DiexfQ8BTT6 772 aaKnown RBP15.3■□□□□ 0.04
Upk1b-201ENSMUST00000057767 Shroom4Q1W617 1475 aa15.29■□□□□ 0.04
Upk1b-201ENSMUST00000057767 Arhgef5E9Q7D5 1581 aa15.29■□□□□ 0.04
Upk1b-201ENSMUST00000057767 Plb1Q3TTY0 1478 aa15.28■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 158.7 ms