RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 PaskQ8CEE6 1383 aa20.52■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 Ttc21aQ8C0S4 1314 aa20.5■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 Ptch1Q61115 1434 aa20.5■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 U2af1Q9D883 239 aaKnown RBP20.5■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 Arid3cA6PWV5 409 aa20.49■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 Apaf1O88879 1249 aa20.48■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 Dusp27Q148W8 1138 aa20.48■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 CastP51125 788 aa20.47■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 Ccdc171E9Q1U1 1324 aa20.46■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 KarsQ99MN1 595 aaKnown RBP20.46■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 4933402E13RikQ9D4D2 429 aa20.46■□□□□ 0.87
Ttc39b-202ENSMUST00000048274 Atp7bQ64446 1462 aa20.45■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Arhgef28P97433 1693 aa20.45■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Ankrd50F7BE84 1390 aa20.45■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Cavin4A2AMM0 362 aa20.44■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 FanciQ8K368 1330 aa20.43■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Plekhg1F6S200 1446 aa20.43■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Fchsd2Q3USJ8 740 aa20.43■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Ahdc1Q6PAL7 1594 aaKnown RBP20.43■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Qser1A2BIE1 1698 aa20.43■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Pik3r4Q8VD65 1358 aa20.43■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Map7O88735 730 aa20.42■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Prrc2bQ7TPM1 1486 aaKnown RBP20.42■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Tnpo1Q8BFY9 898 aaKnown RBP20.41■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Antxr1Q9CZ52 562 aa20.41■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 NktrP30415 1453 aa20.41■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Cul9Q80TT8 1865 aa20.39■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Prdm10Q3UTQ7 1184 aa20.39■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Ipo4Q8VI75 1082 aa20.39■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 Exosc9Q9JHI7 438 aaKnown RBP20.39■□□□□ 0.86
Ttc39b-202ENSMUST00000048274 PtprmP28828 1452 aa20.39■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Gm6268A2A3U9 297 aa20.39■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Polr3glQ8R0C0 218 aa20.38■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Naip7Q9JIB3 1402 aa20.38■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Cep170bQ80U49 1574 aa20.37■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Plcd4Q8K3R3 807 aa20.37■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 PplQ9R269 1755 aa20.36■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Trim28Q62318 834 aa20.36■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Kif2cQ922S8 721 aa20.36■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Wwc1Q5SXA9 1104 aa20.35■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Ppp1r3fQ9JIG4 799 aa20.35■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Abca14E9Q8F8 1683 aa20.35■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Gsto1O09131 240 aa20.34■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Ncapd2Q8K2Z4 1392 aa20.34■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 AU019823E9PUQ3 292 aa20.34■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Plppr3Q7TPB0 716 aa20.34■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Armcx1Q9CX83 456 aa20.34■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Pnmal2G3X9N3 661 aa20.33■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 SkilQ60665 675 aa20.33■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Maco1Q7TQE6 664 aaKnown RBP20.33■□□□□ 0.85
Ttc39b-202ENSMUST00000048274 Rbm25B2RY56 838 aaKnown RBP20.32■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Q4VA45 678 aa20.32■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Swt1Q9DBQ9 907 aa20.32■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 NinlQ6ZQ12 1394 aa20.32■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Brd1E9PZ26 1189 aaKnown RBP20.32■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 G3bp1P97855 465 aaKnown RBP20.3■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Kif18aQ91WD7 886 aa20.3■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Chmp4bQ9D8B3 224 aaKnown RBP20.3■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Terf2O35144 541 aa20.3■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Ccdc60Q8C4J0 545 aa20.29■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Trim26Q99PN3 545 aa20.29■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Itsn1Q9Z0R4 1714 aa20.28■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Cyb5rlB1AS42 316 aa20.28■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Dnajc5gQ8C632 165 aa20.28■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Cetn4Q8K4K1 168 aa20.28■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 KnstrnQ9D9Z1 312 aaKnown RBP20.28■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Gm10093D3YYI8 482 aa20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Hdac1O09106 482 aaKnown RBP20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Fgd1P52734 960 aa20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Spef2Q8C9J3 1734 aa20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Catsper2A2ARP9 588 aa20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Shq1Q7TMX5 569 aa20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Rsph4aQ8BYM7 716 aa20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Cluap1Q8R3P7 413 aa20.27■□□□□ 0.84
Ttc39b-202ENSMUST00000048274 Nwd1A6H603 1563 aa20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Mfap1aC0HKD8 439 aaKnown RBP20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Mfap1bC0HKD9 439 aaKnown RBP20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Kif20aP97329 887 aa20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Aldh1l1Q8R0Y6 902 aa20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Slc12a5Q91V14 1138 aa20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Brwd3A2AHJ4 1799 aa20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Kif13aQ9EQW7 1749 aa20.26■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Cdk19Q8BWD8 501 aa20.25■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Stk26Q99JT2 416 aa20.25■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Phf14Q9D4H9 881 aa20.25■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Yeats2Q3TUF7 1407 aa20.25■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Kif1aP33173 1695 aa20.25■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 LifrP42703 1092 aa20.25■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 MlecQ6ZQI3 291 aaKnown RBP20.25■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Ppp1r15aP17564 657 aa20.24■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Cavin2Q63918 418 aaKnown RBP20.24■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Synj2Q9D2G5 1434 aa20.23■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 MvpQ9EQK5 861 aa20.23■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Nsd3Q6P2L6 1439 aa20.23■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Q3UPC7 1272 aa20.23■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Isy1Q69ZQ2 285 aaKnown RBP20.23■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Plekhm2Q80TQ5 1018 aa20.23■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Zc3h13E9Q784 1729 aaKnown RBP20.22■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 AU015836B2RUM3 263 aa20.22■□□□□ 0.83
Ttc39b-202ENSMUST00000048274 Ankrd44B2RXR6 993 aa20.22■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 29.1 ms