RNA–Protein interactions for RNA: ENSMUST00000021594.4

Tdp1-201, Transcript of Tyrosyl-DNA phosphodiesterase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tdp1, Length 2,019 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1-201ENSMUST00000021594 Uhrf1bp1B2KF50 1429 aa13.13□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Ppp1r9bQ6R891 817 aaKnown RBP13.12□□□□□ -0.31
Tdp1-201ENSMUST00000021594 PtprmP28828 1452 aa13.12□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Hsp90ab1P11499 724 aaKnown RBP13.12□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Ttc21aQ8C0S4 1314 aa13.11□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Cdk19Q8BWD8 501 aa13.11□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Qser1A2BIE1 1698 aa13.11□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Ccdc171E9Q1U1 1324 aa13.11□□□□□ -0.31
Tdp1-201ENSMUST00000021594 CastP51125 788 aa13.1□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Utp14aQ640M1 767 aaKnown RBP13.1□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Polr3glQ8R0C0 218 aa13.1□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Atp2b2Q9R0K7 1198 aa13.1□□□□□ -0.31
Tdp1-201ENSMUST00000021594 Trim28Q62318 834 aa13.08□□□□□ -0.31
Tdp1-201ENSMUST00000021594 NktrP30415 1453 aa13.08□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Ankrd50F7BE84 1390 aa13.08□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Q9D9H8 365 aa13.08□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Swt1Q9DBQ9 907 aa13.08□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Cep170bQ80U49 1574 aa13.07□□□□□ -0.32
Tdp1-201ENSMUST00000021594 NinlQ6ZQ12 1394 aa13.07□□□□□ -0.32
Tdp1-201ENSMUST00000021594 4930567H17RikQ3V0K5 233 aa13.07□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Eif2s2Q99L45 331 aaKnown RBP13.07□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Naip7Q9JIB3 1402 aa13.07□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Zranb1Q7M760 708 aa13.06□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Usp32F8VPZ3 1604 aa13.06□□□□□ -0.32
Tdp1-201ENSMUST00000021594 DaxxO35613 739 aa13.06□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Phlpp2Q8BXA7 1320 aa13.06□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Arhgef28P97433 1693 aa13.06□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Trim26Q99PN3 545 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Cul9Q80TT8 1865 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Pik3r4Q8VD65 1358 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Rbm25B2RY56 838 aaKnown RBP13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Map7O88735 730 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Q4VA45 678 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Htatsf1Q8BGC0 757 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Pdlim2Q8R1G6 349 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Slc12a5Q91V14 1138 aa13.05□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Ppp1r15aP17564 657 aa13.04□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Tbc1d32Q3URV1 1296 aa13.04□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Chmp4bQ9D8B3 224 aaKnown RBP13.04□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Atp7bQ64446 1462 aa13.03□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Afap1Q80YS6 731 aa13.03□□□□□ -0.32
Tdp1-201ENSMUST00000021594 KarsQ99MN1 595 aaKnown RBP13.03□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Rabep1O35551 862 aa13.03□□□□□ -0.32
Tdp1-201ENSMUST00000021594 G3bp1P97855 465 aaKnown RBP13.03□□□□□ -0.32
Tdp1-201ENSMUST00000021594 Sptbn5F6UCX4 1208 aa13.02□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Ccdc60Q8C4J0 545 aa13.02□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Itsn1Q9Z0R4 1714 aa13.02□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Map3k19E9Q3S4 1311 aa13.01□□□□□ -0.33
Tdp1-201ENSMUST00000021594 PalmQ9Z0P4 383 aa13.01□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Hoxb7P09024 217 aa13□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Abca14E9Q8F8 1683 aa13□□□□□ -0.33
Tdp1-201ENSMUST00000021594 4933416C03RikQ3V063 378 aa13□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Wwc1Q5SXA9 1104 aa13□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Maco1Q7TQE6 664 aaKnown RBP13□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Idi2Q8BFZ6 227 aa13□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Armcx1Q9CX83 456 aa13□□□□□ -0.33
Tdp1-201ENSMUST00000021594 SkilQ60665 675 aa12.99□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Ppp1r3fQ9JIG4 799 aa12.99□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Kif13aQ9EQW7 1749 aa12.98□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Gnai1B2RSH2 354 aa12.98□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Irx3P81067 507 aa12.98□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Aldh1l1Q8R0Y6 902 aa12.98□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Gnai3Q9DC51 354 aa12.98□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Ppp1r18Q8BQ30 594 aa12.98□□□□□ -0.33
Tdp1-201ENSMUST00000021594 NpatQ8BMA5 1420 aa12.97□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Vamp4O70480 141 aa12.97□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Cavin2Q63918 418 aaKnown RBP12.97□□□□□ -0.33
Tdp1-201ENSMUST00000021594 KnstrnQ9D9Z1 312 aaKnown RBP12.97□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Zc3h13E9Q784 1729 aaKnown RBP12.97□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Dip2aQ8BWT5 1523 aa12.97□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Plekhm2Q80TQ5 1018 aa12.96□□□□□ -0.33
Tdp1-201ENSMUST00000021594 PplQ9R269 1755 aa12.96□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Nwd1A6H603 1563 aa12.96□□□□□ -0.33
Tdp1-201ENSMUST00000021594 Tnpo1Q8BFY9 898 aaKnown RBP12.96□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Cluap1Q8R3P7 413 aa12.96□□□□□ -0.34
Tdp1-201ENSMUST00000021594 PtpruB1AUH1 1446 aa12.96□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Sos1Q62245 1319 aa12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Cetn4Q8K4K1 168 aa12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Kif18aQ91WD7 886 aa12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Cdc37l1Q9CZP7 335 aa12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 MvpQ9EQK5 861 aa12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 AU019823E9PUQ3 292 aa12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Brd1E9PZ26 1189 aaKnown RBP12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Q3UPC7 1272 aa12.95□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Sirt1Q923E4 737 aa12.94□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Psme1P97371 249 aa12.93□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Gm6268A2A3U9 297 aa12.93□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Ankrd44B2RXR6 993 aa12.92□□□□□ -0.34
Tdp1-201ENSMUST00000021594 CatipB9EKE5 520 aa12.92□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Zfp777B9EKF4 885 aa12.92□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Birc3O08863 600 aa12.92□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Rsph6aQ8CDR2 708 aa12.92□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Pnmal2G3X9N3 661 aa12.91□□□□□ -0.34
Tdp1-201ENSMUST00000021594 LifrP42703 1092 aa12.91□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Znf330Q922H9 316 aa12.91□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Ercc6l2Q9JIM3 1537 aa12.91□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Gtf3c3Q3TMP1 882 aa12.91□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Tmco5bQ80X59 307 aa12.91□□□□□ -0.34
Tdp1-201ENSMUST00000021594 Znf335A2A5K6 1337 aa12.91□□□□□ -0.34
Tdp1-201ENSMUST00000021594 RictorQ6QI06 1708 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 71.5 ms