RNA–Protein interactions for RNA: YPR042C

PUF2, Transcript of PUF family mRNA-binding protein, yeastyeast

Gene PUF2, Length 3,228 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF2YPR042C NOC3Q07896 663 aaPredicted RBP5.57□□□□□ -1.52
PUF2YPR042C HXK1P04806 485 aaKnown RBP5.57□□□□□ -1.52
PUF2YPR042C UTR2P32623 467 aa5.57□□□□□ -1.52
PUF2YPR042C CIC1P38779 376 aaKnown RBP5.57□□□□□ -1.52
PUF2YPR042C TPD3P31383 635 aa5.57□□□□□ -1.52
PUF2YPR042C RAD4P14736 754 aa5.56□□□□□ -1.52
PUF2YPR042C YHL008CP38750 627 aa5.56□□□□□ -1.52
PUF2YPR042C APP1P53933 587 aa5.56□□□□□ -1.52
PUF2YPR042C YDR344CQ05510 147 aa5.56□□□□□ -1.52
PUF2YPR042C PPM2Q08282 695 aa5.56□□□□□ -1.52
PUF2YPR042C PRT1P06103 763 aaKnown RBP5.56□□□□□ -1.52
PUF2YPR042C MRPL33P20084 86 aa5.56□□□□□ -1.52
PUF2YPR042C TIM23P32897 222 aa5.56□□□□□ -1.52
PUF2YPR042C HXT5P38695 592 aa5.56□□□□□ -1.52
PUF2YPR042C PAT1P25644 796 aaKnown RBP5.55□□□□□ -1.52
PUF2YPR042C RTG1P32607 177 aa5.55□□□□□ -1.52
PUF2YPR042C TIM54P47045 478 aa5.55□□□□□ -1.52
PUF2YPR042C TDA5Q06417 326 aaKnown RBP5.55□□□□□ -1.52
PUF2YPR042C DAL4Q04895 635 aa5.54□□□□□ -1.52
PUF2YPR042C BSC2Q05611 235 aa5.54□□□□□ -1.52
PUF2YPR042C YPR015CQ12531 247 aa5.54□□□□□ -1.52
PUF2YPR042C YOL057WQ08225 711 aa5.54□□□□□ -1.52
PUF2YPR042C MOD5P07884 428 aa5.53□□□□□ -1.52
PUF2YPR042C DAT1P13483 248 aaKnown RBP5.53□□□□□ -1.52
PUF2YPR042C BUD21Q08492 214 aaPredicted RBP5.53□□□□□ -1.52
PUF2YPR042C SEC61P32915 480 aa5.53□□□□□ -1.52
PUF2YPR042C YKL069WP36088 180 aa5.53□□□□□ -1.52
PUF2YPR042C SPP1Q03012 353 aa5.53□□□□□ -1.52
PUF2YPR042C ISU1Q03020 165 aa5.53□□□□□ -1.52
PUF2YPR042C YDL129WQ07555 291 aa5.53□□□□□ -1.52
PUF2YPR042C PHO8P11491 566 aa5.53□□□□□ -1.52
PUF2YPR042C CDC34P14682 295 aa5.53□□□□□ -1.52
PUF2YPR042C SMC1P32908 1225 aa5.53□□□□□ -1.52
PUF2YPR042C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
PUF2YPR042C RSC4Q02206 625 aa5.53□□□□□ -1.52
PUF2YPR042C NAN1Q02931 896 aaKnown RBP5.53□□□□□ -1.52
PUF2YPR042C VPS72Q03388 795 aa5.53□□□□□ -1.52
PUF2YPR042C HXT8P40886 569 aa5.52□□□□□ -1.53
PUF2YPR042C ARH1P48360 493 aa5.52□□□□□ -1.53
PUF2YPR042C OPI10Q08202 246 aa5.52□□□□□ -1.53
PUF2YPR042C PRE9P23638 258 aaKnown RBP5.52□□□□□ -1.53
PUF2YPR042C KIP2P28743 706 aa5.52□□□□□ -1.53
PUF2YPR042C TBS1P38114 1094 aa5.52□□□□□ -1.53
PUF2YPR042C SPF1P39986 1215 aaKnown RBP5.52□□□□□ -1.53
PUF2YPR042C MSH4P40965 878 aaPredicted RBP5.52□□□□□ -1.53
PUF2YPR042C EMW1P42842 904 aaKnown RBP5.52□□□□□ -1.53
PUF2YPR042C MRPS18P42847 217 aa5.52□□□□□ -1.53
PUF2YPR042C INP54Q08227 384 aaKnown RBP5.52□□□□□ -1.53
PUF2YPR042C SPT16P32558 1035 aaKnown RBP5.52□□□□□ -1.53
PUF2YPR042C UBP12P39538 1254 aa5.52□□□□□ -1.53
PUF2YPR042C YEN1P40028 759 aa5.52□□□□□ -1.53
PUF2YPR042C TPM2P40414 161 aa5.51□□□□□ -1.53
PUF2YPR042C YGL081WP53156 320 aa5.51□□□□□ -1.53
PUF2YPR042C TYW3P53177 273 aa5.51□□□□□ -1.53
PUF2YPR042C BNI4P53858 892 aa5.51□□□□□ -1.53
PUF2YPR042C VMA3P25515 160 aa5.51□□□□□ -1.53
PUF2YPR042C DUT1P33317 147 aa5.51□□□□□ -1.53
PUF2YPR042C LDB19Q12502 818 aa5.51□□□□□ -1.53
PUF2YPR042C FBP26P32604 452 aa5.5□□□□□ -1.53
PUF2YPR042C YHR020WP38708 688 aaKnown RBP5.5□□□□□ -1.53
PUF2YPR042C MCD1Q12158 566 aa5.5□□□□□ -1.53
PUF2YPR042C UGA4P32837 571 aa5.5□□□□□ -1.53
PUF2YPR042C PRP40P33203 583 aaKnown RBP5.5□□□□□ -1.53
PUF2YPR042C RAD55P38953 406 aa5.5□□□□□ -1.53
PUF2YPR042C UTP14Q04500 899 aaKnown RBP5.5□□□□□ -1.53
PUF2YPR042C YPQ2Q06328 317 aa5.5□□□□□ -1.53
PUF2YPR042C YLR125WQ12138 136 aa5.5□□□□□ -1.53
PUF2YPR042C MKS1P34072 584 aa5.49□□□□□ -1.53
PUF2YPR042C YGR053CP53234 283 aa5.49□□□□□ -1.53
PUF2YPR042C THI4P32318 326 aa5.49□□□□□ -1.53
PUF2YPR042C SCD5P34758 872 aa5.49□□□□□ -1.53
PUF2YPR042C PMC1P38929 1173 aaPredicted RBP5.49□□□□□ -1.53
PUF2YPR042C WTM2Q12206 467 aa5.49□□□□□ -1.53
PUF2YPR042C FLC1Q08967 793 aa5.48□□□□□ -1.53
PUF2YPR042C FAL1Q12099 399 aaKnown RBP5.48□□□□□ -1.53
PUF2YPR042C CCP1P00431 361 aa5.48□□□□□ -1.53
PUF2YPR042C ERR1P0CX10 437 aa5.48□□□□□ -1.53
PUF2YPR042C ERR2P0CX11 437 aa5.48□□□□□ -1.53
PUF2YPR042C SRM1P21827 482 aa5.48□□□□□ -1.53
PUF2YPR042C MCM5P29496 775 aaKnown RBP5.48□□□□□ -1.53
PUF2YPR042C UTP7P40055 554 aaKnown RBP5.48□□□□□ -1.53
PUF2YPR042C YCS4Q06156 1176 aa5.48□□□□□ -1.53
PUF2YPR042C TPO2P53283 614 aa5.48□□□□□ -1.53
PUF2YPR042C DNM1P54861 757 aa5.48□□□□□ -1.53
PUF2YPR042C MCM1P11746 286 aa5.47□□□□□ -1.53
PUF2YPR042C LDH1P38139 375 aa5.47□□□□□ -1.53
PUF2YPR042C CRP1P38845 465 aaKnown RBP5.47□□□□□ -1.53
PUF2YPR042C CHZ1P40019 153 aaPredicted RBP5.47□□□□□ -1.53
PUF2YPR042C TIF6Q12522 245 aaKnown RBP5.47□□□□□ -1.53
PUF2YPR042C BAS1P22035 811 aa5.47□□□□□ -1.53
PUF2YPR042C RGD2P43556 714 aa5.47□□□□□ -1.53
PUF2YPR042C YJR115WP47152 169 aa5.47□□□□□ -1.53
PUF2YPR042C PUS5Q06244 254 aa5.47□□□□□ -1.53
PUF2YPR042C GRX7P38068 203 aa5.46□□□□□ -1.53
PUF2YPR042C RSP5P39940 809 aaKnown RBP5.46□□□□□ -1.53
PUF2YPR042C PTC2P39966 464 aaKnown RBP5.46□□□□□ -1.53
PUF2YPR042C YPL109CQ02981 657 aa5.46□□□□□ -1.53
PUF2YPR042C NCR1Q12200 1170 aa5.46□□□□□ -1.53
PUF2YPR042C MSN1P22148 382 aa5.46□□□□□ -1.54
PUF2YPR042C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms