RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	SET4	P42948	560 aa		4.03	□□□□□ -1.76
SKP2	YNL311C	NET1	P47035	1189 aa		4.03	□□□□□ -1.76
SKP2	YNL311C	MST1	P07236	462 aa		4.02	□□□□□ -1.77
SKP2	YNL311C	KCC4	P25389	1037 aa		4.02	□□□□□ -1.77
SKP2	YNL311C	YAP5	P40574	245 aa		4.02	□□□□□ -1.77
SKP2	YNL311C	IXR1	P33417	597 aa		4.02	□□□□□ -1.77
SKP2	YNL311C	DSD1	P53095	428 aa		4.02	□□□□□ -1.77
SKP2	YNL311C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
SKP2	YNL311C	GAS5	Q08193	484 aa		4.02	□□□□□ -1.77
SKP2	YNL311C	DAP1	Q12091	152 aa		4.02	□□□□□ -1.77
SKP2	YNL311C	TOR1	P35169	2470 aa		4.01	□□□□□ -1.77
SKP2	YNL311C	UIP5	P36137	443 aa		4.01	□□□□□ -1.77
SKP2	YNL311C	UTP7	P40055	554 aa	Known RBP	4.01	□□□□□ -1.77
SKP2	YNL311C	YJL007C	P47080	104 aa		4.01	□□□□□ -1.77
SKP2	YNL311C	AOS1	Q06624	347 aa		4.01	□□□□□ -1.77
SKP2	YNL311C	KRE2	P27809	442 aa		4	□□□□□ -1.77
SKP2	YNL311C	FKH1	P40466	484 aa		4	□□□□□ -1.77
SKP2	YNL311C	YLR271W	Q06152	274 aa		4	□□□□□ -1.77
SKP2	YNL311C	PRP42	Q03776	544 aa	Known RBP	4	□□□□□ -1.77
SKP2	YNL311C	ACK1	Q07622	623 aa	Predicted RBP	4	□□□□□ -1.77
SKP2	YNL311C	PPM2	Q08282	695 aa		4	□□□□□ -1.77
SKP2	YNL311C	MDM20	Q12387	796 aa	Known RBP	4	□□□□□ -1.77
SKP2	YNL311C	YOR131C	Q12486	218 aa		4	□□□□□ -1.77
SKP2	YNL311C	FLO11	P08640	1367 aa		3.99	□□□□□ -1.77
SKP2	YNL311C	TRP5	P00931	707 aa	Known RBP	3.99	□□□□□ -1.77
SKP2	YNL311C	ARG8	P18544	423 aa		3.99	□□□□□ -1.77
SKP2	YNL311C	CDC60	P26637	1090 aa	Known RBP	3.99	□□□□□ -1.77
SKP2	YNL311C	ZDS1	P50111	915 aa	Known RBP	3.99	□□□□□ -1.77
SKP2	YNL311C	ALE1	Q08548	619 aa		3.99	□□□□□ -1.77
SKP2	YNL311C	MAM3	Q12296	706 aa		3.99	□□□□□ -1.77
SKP2	YNL311C	YBL029C-A	Q3E756	94 aa		3.99	□□□□□ -1.77
SKP2	YNL311C	MTC3	P53077	123 aa		3.98	□□□□□ -1.77
SKP2	YNL311C	DPH6	Q12429	685 aa		3.98	□□□□□ -1.77
SKP2	YNL311C	MXR1	P40029	184 aa		3.98	□□□□□ -1.77
SKP2	YNL311C	TPS3	P38426	1054 aa	Known RBP	3.97	□□□□□ -1.77
SKP2	YNL311C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
SKP2	YNL311C	SSP1	P38871	571 aa		3.97	□□□□□ -1.77
SKP2	YNL311C	YJL171C	P46992	396 aa		3.97	□□□□□ -1.77
SKP2	YNL311C	ART5	P53244	586 aa	Known RBP	3.97	□□□□□ -1.77
SKP2	YNL311C	SUT2	Q12286	268 aa		3.97	□□□□□ -1.77
SKP2	YNL311C	DIT2	P21595	489 aa		3.96	□□□□□ -1.78
SKP2	YNL311C	MCM6	P53091	1017 aa	Known RBP	3.96	□□□□□ -1.78
SKP2	YNL311C	CFT2	Q12102	859 aa	Predicted RBP	3.96	□□□□□ -1.78
SKP2	YNL311C	PSF3	Q12146	194 aa		3.96	□□□□□ -1.78
SKP2	YNL311C	VPS13	Q07878	3144 aa		3.96	□□□□□ -1.78
SKP2	YNL311C	UGA3	P26370	528 aa		3.96	□□□□□ -1.78
SKP2	YNL311C	IRE1	P32361	1115 aa		3.96	□□□□□ -1.78
SKP2	YNL311C	OCT1	P35999	772 aa		3.96	□□□□□ -1.78
SKP2	YNL311C	GRS1	P38088	690 aa	Known RBP	3.95	□□□□□ -1.78
SKP2	YNL311C	ICP55	P40051	511 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	3.95	□□□□□ -1.78	not detected
SKP2	YNL311C	VID30	P53076	958 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	HIM1	Q06674	414 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	MET7	Q08645	548 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	ARG82	P07250	355 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	HEM1	P09950	548 aa	Predicted RBP	3.95	□□□□□ -1.78
SKP2	YNL311C	MCD4	P36051	919 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	VAB2	P40003	282 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	VNX1	P42839	908 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	RSC8	P43609	557 aa	Known RBP	3.95	□□□□□ -1.78
SKP2	YNL311C	YJR107W	P47145	328 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	SPP1	Q03012	353 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	PEX29	Q03370	554 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	WSC3	Q12215	556 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	LDB19	Q12502	818 aa		3.95	□□□□□ -1.78
SKP2	YNL311C	HIP1	P06775	603 aa		3.94	□□□□□ -1.78
SKP2	YNL311C	GSM1	P42950	618 aa		3.94	□□□□□ -1.78
SKP2	YNL311C	YPR204W	Q08995	1032 aa		3.94	□□□□□ -1.78
SKP2	YNL311C	MRM1	P25270	412 aa		3.93	□□□□□ -1.78
SKP2	YNL311C	AKL1	P38080	1108 aa	Known RBP	3.93	□□□□□ -1.78
SKP2	YNL311C	LYS14	P40971	790 aa		3.93	□□□□□ -1.78
SKP2	YNL311C	OYE3	P41816	400 aa	Predicted RBP	3.93	□□□□□ -1.78
SKP2	YNL311C	RPT4	P53549	437 aa	Known RBP	3.93	□□□□□ -1.78
SKP2	YNL311C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.92	□□□□□ -1.78	not detected
SKP2	YNL311C	RPS7A	P26786	190 aa	Known RBP	3.92	□□□□□ -1.78
SKP2	YNL311C	KSP1	P38691	1029 aa	Known RBP	3.92	□□□□□ -1.78
SKP2	YNL311C	AFG3	P39925	761 aa		3.92	□□□□□ -1.78
SKP2	YNL311C	NSE3	Q05541	303 aa		3.92	□□□□□ -1.78
SKP2	YNL311C	MLP1	Q02455	1875 aa	Known RBP	3.92	□□□□□ -1.78
SKP2	YNL311C	KAR2	P16474	682 aa	Known RBP	3.92	□□□□□ -1.78
SKP2	YNL311C	RDH54	P38086	958 aa		3.92	□□□□□ -1.78
SKP2	YNL311C	ECM16	Q04217	1267 aa	Known RBP	3.92	□□□□□ -1.78
SKP2	YNL311C	RAD59	Q12223	238 aa		3.92	□□□□□ -1.78
SKP2	YNL311C	RAD53	P22216	821 aa		3.91	□□□□□ -1.78
SKP2	YNL311C	JHD1	P40034	492 aa		3.91	□□□□□ -1.78
SKP2	YNL311C	NTH2	P35172	780 aa		3.91	□□□□□ -1.78
SKP2	YNL311C	SPL2	P38839	148 aa		3.91	□□□□□ -1.78
SKP2	YNL311C	WRS1	Q12109	432 aa	Known RBP	3.91	□□□□□ -1.78
SKP2	YNL311C	RPL40A	P0CH08	128 aa	Known RBP	3.9	□□□□□ -1.79
SKP2	YNL311C	RPL40B	P0CH09	128 aa	Known RBP	3.9	□□□□□ -1.79
SKP2	YNL311C	SRS2	P12954	1174 aa		3.9	□□□□□ -1.79
SKP2	YNL311C	APL2	P36000	726 aa	Predicted RBP	3.9	□□□□□ -1.79
SKP2	YNL311C	KEL1	P38853	1164 aa	Known RBP	3.9	□□□□□ -1.79
SKP2	YNL311C	RTR1	P40084	226 aa	Predicted RBP	3.9	□□□□□ -1.79
SKP2	YNL311C	BRE5	P53741	515 aa	Known RBP	3.9	□□□□□ -1.79
SKP2	YNL311C	SAC3	P46674	1301 aa		3.9	□□□□□ -1.79
SKP2	YNL311C	MIP1	P15801	1254 aa		3.9	□□□□□ -1.79
SKP2	YNL311C	PKC1	P24583	1151 aa		3.9	□□□□□ -1.79
SKP2	YNL311C	RGT1	P32862	1170 aa		3.9	□□□□□ -1.79
SKP2	YNL311C	TIF11	P38912	153 aa	Known RBP	3.9	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 66.6 ms