RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W RTG2P32608 588 aaKnown RBP5.17□□□□□ -1.58
PUB1YNL016W ALD4P46367 519 aaKnown RBP5.17□□□□□ -1.58
PUB1YNL016W CCT8P47079 568 aaKnown RBP5.17□□□□□ -1.58
PUB1YNL016W NNF1P47149 201 aa5.17□□□□□ -1.58
PUB1YNL016W RTS3P53289 263 aa5.17□□□□□ -1.58
PUB1YNL016W YML083CQ04526 418 aa5.17□□□□□ -1.58
PUB1YNL016W YMR074CQ04773 145 aa5.17□□□□□ -1.58
PUB1YNL016W RRP15Q06511 250 aaPredicted RBP5.17□□□□□ -1.58
PUB1YNL016W SEC20P28791 383 aa5.16□□□□□ -1.58
PUB1YNL016W NUP85P46673 744 aa5.16□□□□□ -1.58
PUB1YNL016W BUD21Q08492 214 aaPredicted RBP5.16□□□□□ -1.58
PUB1YNL016W SIS2P36024 562 aa5.16□□□□□ -1.58
PUB1YNL016W MVP1P40959 511 aaKnown RBP5.16□□□□□ -1.58
PUB1YNL016W ALD2P47771 506 aa5.16□□□□□ -1.58
PUB1YNL016W SUB1P54000 292 aaKnown RBP5.16□□□□□ -1.58
PUB1YNL016W SVF1Q05515 481 aa5.16□□□□□ -1.58
PUB1YNL016W PDR11P40550 1411 aa5.15□□□□□ -1.58
PUB1YNL016W NSG2P53898 299 aa5.15□□□□□ -1.59
PUB1YNL016W YPR109WQ06104 294 aa5.15□□□□□ -1.59
PUB1YNL016W KRE5P22023 1365 aa5.14□□□□□ -1.59
PUB1YNL016W CFT1Q06632 1357 aaKnown RBP5.14□□□□□ -1.59
PUB1YNL016W SUP45P12385 437 aaKnown RBP5.14□□□□□ -1.59
PUB1YNL016W AGE1Q04412 482 aa5.14□□□□□ -1.59
PUB1YNL016W SBP1P10080 294 aaKnown RBP5.13□□□□□ -1.59
PUB1YNL016W CSE4P36012 229 aa5.13□□□□□ -1.59
PUB1YNL016W YJR008WP47085 338 aa5.13□□□□□ -1.59
PUB1YNL016W TUB4P53378 473 aa5.12□□□□□ -1.59
PUB1YNL016W VPS72Q03388 795 aa5.12□□□□□ -1.59
PUB1YNL016W MSC6Q08818 692 aaKnown RBP5.12□□□□□ -1.59
PUB1YNL016W OSW7P43611 510 aa5.11□□□□□ -1.59
PUB1YNL016W RIA1P53893 1110 aa5.11□□□□□ -1.59
PUB1YNL016W YNL108CP53929 270 aa5.11□□□□□ -1.59
PUB1YNL016W SYH1Q02875 849 aaKnown RBP5.11□□□□□ -1.59
PUB1YNL016W MRX10Q05648 414 aa5.11□□□□□ -1.59
PUB1YNL016W YBL113CQ7M4S9 792 aa5.11□□□□□ -1.59
PUB1YNL016W ENO1P00924 437 aaKnown RBP5.1□□□□□ -1.59
PUB1YNL016W YNR029CP53729 429 aaKnown RBP5.1□□□□□ -1.59
PUB1YNL016W UBX5Q06682 500 aa5.1□□□□□ -1.59
PUB1YNL016W ENT1Q12518 454 aa5.1□□□□□ -1.59
PUB1YNL016W MAK16P10962 306 aaPredicted RBP5.09□□□□□ -1.59
PUB1YNL016W ATE1P16639 503 aa5.09□□□□□ -1.59
PUB1YNL016W TGL4P36165 910 aa5.09□□□□□ -1.59
PUB1YNL016W ERP5P38819 212 aa5.09□□□□□ -1.59
PUB1YNL016W TEA1P47988 759 aa5.09□□□□□ -1.59
PUB1YNL016W GCN2P15442 1659 aa5.08□□□□□ -1.6
PUB1YNL016W POL32P47110 350 aa5.08□□□□□ -1.6
PUB1YNL016W TPO2P53283 614 aa5.08□□□□□ -1.6
PUB1YNL016W RNH70P53331 553 aa5.08□□□□□ -1.6
PUB1YNL016W RAD59Q12223 238 aa5.08□□□□□ -1.6
PUB1YNL016W YOL098CQ12496 1037 aa5.08□□□□□ -1.6
PUB1YNL016W YRF1-2P40105 1681 aa5.07□□□□□ -1.6
PUB1YNL016W ENO2P00925 437 aaKnown RBP5.07□□□□□ -1.6
PUB1YNL016W PPX1P38698 397 aa5.07□□□□□ -1.6
PUB1YNL016W RIM21P48565 533 aa5.07□□□□□ -1.6
PUB1YNL016W HST2P53686 357 aa5.07□□□□□ -1.6
PUB1YNL016W IMH1Q06704 911 aaKnown RBP5.07□□□□□ -1.6
PUB1YNL016W SPT5P27692 1063 aaKnown RBP5.06□□□□□ -1.6
PUB1YNL016W FPR3P38911 411 aaKnown RBP5.06□□□□□ -1.6
PUB1YNL016W ROG3P43602 733 aa5.06□□□□□ -1.6
PUB1YNL016W MAG2Q06436 670 aaKnown RBP5.06□□□□□ -1.6
PUB1YNL016W THI72Q08579 599 aa5.06□□□□□ -1.6
PUB1YNL016W STB3Q12427 513 aa5.06□□□□□ -1.6
PUB1YNL016W TRL1P09880 827 aaKnown RBP5.05□□□□□ -1.6
PUB1YNL016W RGR1P19263 1082 aa5.05□□□□□ -1.6
PUB1YNL016W PEP12P32854 288 aa5.05□□□□□ -1.6
PUB1YNL016W YHL050CP38721 697 aa5.05□□□□□ -1.6
PUB1YNL016W YHR219WP38900 624 aa5.05□□□□□ -1.6
PUB1YNL016W TY1A-MR1Q04215 440 aa5.05□□□□□ -1.6
PUB1YNL016W GIN4Q12263 1142 aa5.05□□□□□ -1.6
PUB1YNL016W CLB5P30283 435 aa5.04□□□□□ -1.6
PUB1YNL016W TOM20P35180 183 aa5.04□□□□□ -1.6
PUB1YNL016W RRP14P36080 434 aaKnown RBP5.04□□□□□ -1.6
PUB1YNL016W JJJ3P47138 172 aa5.04□□□□□ -1.6
PUB1YNL016W LYS5P50113 272 aa5.04□□□□□ -1.6
PUB1YNL016W UBP2Q01476 1272 aa5.04□□□□□ -1.6
PUB1YNL016W TY3B-IQ7LHG5 1498 aaKnown RBP5.04□□□□□ -1.6
PUB1YNL016W NUP192P47054 1683 aa5.04□□□□□ -1.6
PUB1YNL016W YFL066CP43538 392 aa5.04□□□□□ -1.6
PUB1YNL016W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
PUB1YNL016W PKH3Q03306 898 aaPredicted RBP5.04□□□□□ -1.6
PUB1YNL016W WHI5Q12416 295 aa5.04□□□□□ -1.6
PUB1YNL016W RRP5Q05022 1729 aaKnown RBP5.03□□□□□ -1.6
PUB1YNL016W CCP1P00431 361 aa5.03□□□□□ -1.6
PUB1YNL016W YDJ1P25491 409 aaKnown RBP5.03□□□□□ -1.6
PUB1YNL016W TPD3P31383 635 aa5.03□□□□□ -1.6
PUB1YNL016W SEC8P32855 1065 aa5.03□□□□□ -1.6
PUB1YNL016W NAB3P38996 802 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
PUB1YNL016W MDJ2P42834 146 aa5.03□□□□□ -1.6
PUB1YNL016W YJR107WP47145 328 aa5.03□□□□□ -1.6
PUB1YNL016W OYE2Q03558 400 aaKnown RBP5.03□□□□□ -1.6
PUB1YNL016W LSC2P53312 427 aa5.02□□□□□ -1.61
PUB1YNL016W FPK1P53739 893 aa5.02□□□□□ -1.61
PUB1YNL016W NIS1P53939 407 aa5.02□□□□□ -1.61
PUB1YNL016W JIP5Q06214 492 aaPredicted RBP5.02□□□□□ -1.61
PUB1YNL016W CIT2P08679 460 aa5.01□□□□□ -1.61
PUB1YNL016W ESS1P22696 170 aa5.01□□□□□ -1.61
PUB1YNL016W PPG1P32838 368 aa5.01□□□□□ -1.61
PUB1YNL016W KXD1P53158 218 aa5.01□□□□□ -1.61
PUB1YNL016W ALG12P53730 551 aa5.01□□□□□ -1.61
PUB1YNL016W CWC15Q03772 175 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms