RNA–Protein interactions for RNA: YML075C

HMG1, Transcript of HMG-CoA reductase, yeast

Gene HMG1, Length 3,165 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMG1	YML075C	PDI1	P17967	522 aa	Known RBP	4.7	□□□□□ -1.66
HMG1	YML075C	PKC1	P24583	1151 aa		4.7	□□□□□ -1.66
HMG1	YML075C	BRF1	P29056	596 aa		4.7	□□□□□ -1.66
HMG1	YML075C	SWI3	P32591	825 aa		4.7	□□□□□ -1.66
HMG1	YML075C	RTF1	P53064	558 aa		4.7	□□□□□ -1.66
HMG1	YML075C	RPN7	Q06103	429 aa	Known RBP	4.7	□□□□□ -1.66
HMG1	YML075C	YAH1	Q12184	172 aa	Known RBP	4.7	□□□□□ -1.66
HMG1	YML075C	FKS3	Q04952	1785 aa		4.7	□□□□□ -1.66
HMG1	YML075C	SNF2	P22082	1703 aa		4.7	□□□□□ -1.66
HMG1	YML075C	SEC23	P15303	768 aa	Known RBP	4.7	□□□□□ -1.66
HMG1	YML075C	GLC3	P32775	704 aa		4.7	□□□□□ -1.66
HMG1	YML075C	PEX5	P35056	612 aa		4.7	□□□□□ -1.66
HMG1	YML075C	MET1	P36150	593 aa		4.7	□□□□□ -1.66
HMG1	YML075C	FAP1	P53971	965 aa		4.7	□□□□□ -1.66
HMG1	YML075C	PET123	P17558	318 aa		4.69	□□□□□ -1.66
HMG1	YML075C	MSH3	P25336	1018 aa		4.69	□□□□□ -1.66
HMG1	YML075C	RPN12	P32496	274 aa		4.69	□□□□□ -1.66
HMG1	YML075C	ECM32	P32644	1121 aa	Known RBP	4.69	□□□□□ -1.66
HMG1	YML075C	HPC2	Q01448	625 aa		4.69	□□□□□ -1.66
HMG1	YML075C	MTC5	Q03897	1148 aa		4.69	□□□□□ -1.66
HMG1	YML075C	VTI1	Q04338	217 aa		4.69	□□□□□ -1.66
HMG1	YML075C	MPH2	P0CD99	609 aa		4.69	□□□□□ -1.66
HMG1	YML075C	MAK16	P10962	306 aa	Predicted RBP	4.69	□□□□□ -1.66
HMG1	YML075C	NPR3	P38742	1146 aa		4.69	□□□□□ -1.66
HMG1	YML075C	BUD6	P41697	788 aa		4.69	□□□□□ -1.66
HMG1	YML075C	TFG1	P41895	735 aa	Predicted RBP	4.69	□□□□□ -1.66
HMG1	YML075C	TFB3	Q03290	321 aa		4.69	□□□□□ -1.66
HMG1	YML075C	NOP58	Q12499	511 aa	Known RBP	4.69	□□□□□ -1.66
HMG1	YML075C	PET111	P08468	800 aa		4.69	□□□□□ -1.66
HMG1	YML075C	NST1	P53935	1240 aa		4.69	□□□□□ -1.66
HMG1	YML075C	PUF6	Q04373	656 aa	Known RBP	4.69	□□□□□ -1.66
HMG1	YML075C	APC5	Q08683	685 aa		4.69	□□□□□ -1.66
HMG1	YML075C	AUS1	Q08409	1394 aa		4.68	□□□□□ -1.66
HMG1	YML075C	TPM1	P17536	199 aa	Known RBP	4.68	□□□□□ -1.66
HMG1	YML075C	ANP1	P32629	500 aa		4.68	□□□□□ -1.66
HMG1	YML075C	IES5	P40060	125 aa		4.68	□□□□□ -1.66
HMG1	YML075C	YLR271W	Q06152	274 aa		4.68	□□□□□ -1.66
HMG1	YML075C	URB1	P34241	1764 aa	Known RBP	4.68	□□□□□ -1.66
HMG1	YML075C	YIL177C	P40434	1758 aa		4.68	□□□□□ -1.66
HMG1	YML075C	YJL225C	P40889	1758 aa		4.68	□□□□□ -1.66
HMG1	YML075C	FOB1	O13329	566 aa		4.68	□□□□□ -1.66
HMG1	YML075C	RPP0	P05317	312 aa	Known RBP	4.68	□□□□□ -1.66
HMG1	YML075C	PSD2	P53037	1138 aa	Known RBP	4.68	□□□□□ -1.66
HMG1	YML075C	GTT3	P39996	337 aa		4.67	□□□□□ -1.66
HMG1	YML075C	MAM1	P40065	302 aa		4.67	□□□□□ -1.66
HMG1	YML075C	RPO41	P13433	1351 aa	Known RBP	4.67	□□□□□ -1.66
HMG1	YML075C	ABZ1	P37254	787 aa	Predicted RBP	4.67	□□□□□ -1.66
HMG1	YML075C	ATG1	P53104	897 aa		4.67	□□□□□ -1.66
HMG1	YML075C	PUS1	Q12211	544 aa	Known RBP	4.67	□□□□□ -1.66
HMG1	YML075C	YEF3	P16521	1044 aa	Known RBP	4.67	□□□□□ -1.66
HMG1	YML075C	ATG19	P35193	415 aa		4.67	□□□□□ -1.66
HMG1	YML075C	CSE4	P36012	229 aa		4.67	□□□□□ -1.66
HMG1	YML075C	UBP12	P39538	1254 aa		4.67	□□□□□ -1.66
HMG1	YML075C	GCD10	P41814	478 aa		4.67	□□□□□ -1.66
HMG1	YML075C	HOL1	P53389	586 aa		4.67	□□□□□ -1.66
HMG1	YML075C	CTR9	P89105	1077 aa		4.67	□□□□□ -1.66
HMG1	YML075C	SVF1	Q05515	481 aa		4.67	□□□□□ -1.66
HMG1	YML075C	ACP1	P32463	125 aa		4.66	□□□□□ -1.66
HMG1	YML075C	ARC19	P33204	171 aa	Known RBP	4.66	□□□□□ -1.66
HMG1	YML075C	VPS70	P47161	811 aa		4.66	□□□□□ -1.66
HMG1	YML075C	ITC1	P53125	1264 aa		4.66	□□□□□ -1.66
HMG1	YML075C	NOP14	Q99207	810 aa	Known RBP	4.66	□□□□□ -1.66
HMG1	YML075C	YDJ1	P25491	409 aa	Known RBP	4.66	□□□□□ -1.66
HMG1	YML075C	OXP1	P28273	1286 aa		4.66	□□□□□ -1.66
HMG1	YML075C	RXT2	P38255	430 aa		4.66	□□□□□ -1.66
HMG1	YML075C	VID30	P53076	958 aa		4.66	□□□□□ -1.66
HMG1	YML075C	GGA1	Q06336	557 aa		4.66	□□□□□ -1.66
HMG1	YML075C	YOR378W	Q08902	515 aa		4.66	□□□□□ -1.66
HMG1	YML075C	BMS1	Q08965	1183 aa	Known RBP	4.66	□□□□□ -1.66
HMG1	YML075C	EDE1	P34216	1381 aa		4.65	□□□□□ -1.66
HMG1	YML075C	PIF1	P07271	859 aa		4.65	□□□□□ -1.66
HMG1	YML075C	PRP5	P21372	849 aa	Predicted RBP	4.65	□□□□□ -1.66
HMG1	YML075C	PPG1	P32838	368 aa		4.65	□□□□□ -1.66
HMG1	YML075C	STO1	P34160	861 aa	Known RBP	4.65	□□□□□ -1.66
HMG1	YML075C	LAM1	P38851	1228 aa		4.65	□□□□□ -1.66
HMG1	YML075C	VPS41	P38959	992 aa		4.65	□□□□□ -1.66
HMG1	YML075C	RTT105	P40063	208 aa		4.65	□□□□□ -1.66
HMG1	YML075C	ATG32	P40458	529 aa		4.65	□□□□□ -1.66
HMG1	YML075C	CWH41	P53008	833 aa		4.65	□□□□□ -1.66
HMG1	YML075C	RUD3	Q12234	484 aa	Known RBP	4.65	□□□□□ -1.66
HMG1	YML075C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.65	□□□□□ -1.66	RIP-Chip
HMG1	YML075C	KRR1	P25586	316 aa	Predicted RBP	4.65	□□□□□ -1.67
HMG1	YML075C	CDC3	P32457	520 aa	Known RBP	4.65	□□□□□ -1.67
HMG1	YML075C	BIM1	P40013	344 aa		4.65	□□□□□ -1.67
HMG1	YML075C	VID27	P40157	782 aa		4.65	□□□□□ -1.67
HMG1	YML075C	YJR142W	P47173	342 aa		4.65	□□□□□ -1.67
HMG1	YML075C	YGL081W	P53156	320 aa		4.65	□□□□□ -1.67
HMG1	YML075C	NFI1	Q12216	726 aa		4.65	□□□□□ -1.67
HMG1	YML075C	SIR4	P11978	1358 aa		4.65	□□□□□ -1.67
HMG1	YML075C	RSF2	P46974	1380 aa		4.65	□□□□□ -1.67
HMG1	YML075C	DPS1	P04802	557 aa	Known RBP	4.65	□□□□□ -1.67
HMG1	YML075C	RPS24A	P0CX31	135 aa	Known RBP	4.65	□□□□□ -1.67
HMG1	YML075C	RPS24B	P0CX32	135 aa	Known RBP	4.65	□□□□□ -1.67
HMG1	YML075C	PEP12	P32854	288 aa		4.65	□□□□□ -1.67
HMG1	YML075C	ARB1	P40024	610 aa	Known RBP	4.65	□□□□□ -1.67
HMG1	YML075C	PEX21	P50091	288 aa		4.65	□□□□□ -1.67
HMG1	YML075C	ARV1	Q06541	321 aa		4.65	□□□□□ -1.67
HMG1	YML075C	GRC3	Q07845	632 aa		4.65	□□□□□ -1.67
HMG1	YML075C	YPL191C	Q08930	360 aa		4.65	□□□□□ -1.67
HMG1	YML075C	DPH6	Q12429	685 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms