RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C LDH1P38139 375 aa5.2□□□□□ -1.58
VPS33YLR396C DYS1P38791 387 aa5.2□□□□□ -1.58
VPS33YLR396C SUT1P53032 299 aaKnown RBP5.2□□□□□ -1.58
VPS33YLR396C HEM3P28789 327 aa5.19□□□□□ -1.58
VPS33YLR396C HXT8P40886 569 aa5.19□□□□□ -1.58
VPS33YLR396C MTO1P53070 669 aa5.19□□□□□ -1.58
VPS33YLR396C SCW11P53189 542 aa5.19□□□□□ -1.58
VPS33YLR396C UFD2P54860 961 aa5.19□□□□□ -1.58
VPS33YLR396C YDR444WQ04093 687 aa5.19□□□□□ -1.58
VPS33YLR396C WHI5Q12416 295 aa5.19□□□□□ -1.58
VPS33YLR396C NAM8Q00539 523 aaKnown RBP5.18□□□□□ -1.58
VPS33YLR396C MNL2Q12205 849 aa5.18□□□□□ -1.58
VPS33YLR396C MSN1P22148 382 aa5.17□□□□□ -1.58
VPS33YLR396C SKP1P52286 194 aa5.17□□□□□ -1.58
VPS33YLR396C GPI13Q07830 1017 aa5.17□□□□□ -1.58
VPS33YLR396C RGP1P16664 663 aa5.16□□□□□ -1.58
VPS33YLR396C SMC1P32908 1225 aa5.16□□□□□ -1.58
VPS33YLR396C YOR296WQ08748 1289 aa5.16□□□□□ -1.58
VPS33YLR396C NAB2P32505 525 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
VPS33YLR396C RGD2P43556 714 aa5.16□□□□□ -1.58
VPS33YLR396C CUS1Q02554 436 aaPredicted RBP5.16□□□□□ -1.58
VPS33YLR396C MET4P32389 672 aa5.15□□□□□ -1.59
VPS33YLR396C GIP1P38229 639 aa5.15□□□□□ -1.59
VPS33YLR396C BSD2P38356 321 aa5.15□□□□□ -1.59
VPS33YLR396C NTA1P40354 457 aa5.15□□□□□ -1.59
VPS33YLR396C ROG3P43602 733 aa5.15□□□□□ -1.59
VPS33YLR396C MRPL16P38064 232 aa5.14□□□□□ -1.59
VPS33YLR396C ISW1P38144 1129 aa5.14□□□□□ -1.59
VPS33YLR396C TY1A-MR1Q04215 440 aa5.14□□□□□ -1.59
VPS33YLR396C RAD55P38953 406 aa5.14□□□□□ -1.59
VPS33YLR396C ACO2P39533 789 aa5.14□□□□□ -1.59
VPS33YLR396C FIR1P40020 876 aa5.14□□□□□ -1.59
VPS33YLR396C RRP15Q06511 250 aaPredicted RBP5.14□□□□□ -1.59
VPS33YLR396C STB3Q12427 513 aa5.14□□□□□ -1.59
VPS33YLR396C CCP1P00431 361 aa5.13□□□□□ -1.59
VPS33YLR396C THI12P42883 340 aa5.13□□□□□ -1.59
VPS33YLR396C THI5P43534 340 aa5.13□□□□□ -1.59
VPS33YLR396C THI11P47183 340 aa5.13□□□□□ -1.59
VPS33YLR396C YNL011CP53980 444 aa5.13□□□□□ -1.59
VPS33YLR396C CDC55Q00362 526 aa5.13□□□□□ -1.59
VPS33YLR396C RSC4Q02206 625 aa5.13□□□□□ -1.59
VPS33YLR396C THI13Q07748 340 aa5.13□□□□□ -1.59
VPS33YLR396C TIF6Q12522 245 aaKnown RBP5.12□□□□□ -1.59
VPS33YLR396C DIT1P21623 536 aa5.12□□□□□ -1.59
VPS33YLR396C IRS4P36115 615 aaKnown RBP5.12□□□□□ -1.59
VPS33YLR396C APM2P38700 605 aa5.12□□□□□ -1.59
VPS33YLR396C ITC1P53125 1264 aa5.12□□□□□ -1.59
VPS33YLR396C CUZ1P53899 274 aa5.12□□□□□ -1.59
VPS33YLR396C ATE1P16639 503 aa5.11□□□□□ -1.59
VPS33YLR396C ASF1P32447 279 aa5.11□□□□□ -1.59
VPS33YLR396C PSY2P40164 858 aa5.11□□□□□ -1.59
VPS33YLR396C YIR007WP40566 764 aa5.11□□□□□ -1.59
VPS33YLR396C POL32P47110 350 aa5.11□□□□□ -1.59
VPS33YLR396C YNR040WP53736 256 aa5.11□□□□□ -1.59
VPS33YLR396C RPP1AP05318 106 aaPredicted RBP5.11□□□□□ -1.59
VPS33YLR396C PHO4P07270 312 aaKnown RBP5.11□□□□□ -1.59
VPS33YLR396C YBR287WP38355 427 aa5.11□□□□□ -1.59
VPS33YLR396C EMG1Q06287 252 aaKnown RBP5.11□□□□□ -1.59
VPS33YLR396C CAF120P53836 1060 aa5.1□□□□□ -1.59
VPS33YLR396C NCL1P38205 684 aaKnown RBP5.09□□□□□ -1.59
VPS33YLR396C YIL165CP40446 119 aa5.09□□□□□ -1.59
VPS33YLR396C YMR265CQ03508 461 aaKnown RBP5.09□□□□□ -1.59
VPS33YLR396C MSC7P38694 644 aa5.09□□□□□ -1.59
VPS33YLR396C BSC2Q05611 235 aa5.09□□□□□ -1.59
VPS33YLR396C YDL176WQ12027 708 aa5.09□□□□□ -1.59
VPS33YLR396C AIM46P38885 310 aa5.08□□□□□ -1.6
VPS33YLR396C KRE33P53914 1056 aaKnown RBP5.08□□□□□ -1.6
VPS33YLR396C YDR461C-AQ2V2P7 80 aa5.08□□□□□ -1.6
VPS33YLR396C GAR1P28007 205 aaKnown RBP5.08□□□□□ -1.6
VPS33YLR396C YER156CP40093 338 aaKnown RBP5.08□□□□□ -1.6
VPS33YLR396C DAK2P43550 591 aa5.08□□□□□ -1.6
VPS33YLR396C GCD6P32501 712 aaKnown RBP5.07□□□□□ -1.6
VPS33YLR396C SAM37P50110 327 aa5.07□□□□□ -1.6
VPS33YLR396C FPS1P23900 669 aa5.06□□□□□ -1.6
VPS33YLR396C YJR107WP47145 328 aa5.06□□□□□ -1.6
VPS33YLR396C ADE12P80210 433 aaKnown RBP5.06□□□□□ -1.6
VPS33YLR396C CTR9P89105 1077 aa5.06□□□□□ -1.6
VPS33YLR396C HEH2Q03281 663 aa5.06□□□□□ -1.6
VPS33YLR396C SYT1Q06836 1226 aa5.06□□□□□ -1.6
VPS33YLR396C IDI1P15496 288 aa5.06□□□□□ -1.6
VPS33YLR396C VPS35P34110 944 aa5.06□□□□□ -1.6
VPS33YLR396C NOC3Q07896 663 aaPredicted RBP5.06□□□□□ -1.6
VPS33YLR396C MGE1P38523 228 aa5.05□□□□□ -1.6
VPS33YLR396C LYS5P50113 272 aa5.05□□□□□ -1.6
VPS33YLR396C SNU71P53207 620 aaKnown RBP5.05□□□□□ -1.6
VPS33YLR396C COBP00163 385 aa5.04□□□□□ -1.6
VPS33YLR396C RPT1P33299 467 aaKnown RBP5.04□□□□□ -1.6
VPS33YLR396C CIC1P38779 376 aaKnown RBP5.04□□□□□ -1.6
VPS33YLR396C CEM1P39525 442 aa5.04□□□□□ -1.6
VPS33YLR396C TY1A-DR2Q03964 440 aaKnown RBP5.04□□□□□ -1.6
VPS33YLR396C INP54Q08227 384 aaKnown RBP5.04□□□□□ -1.6
VPS33YLR396C FLP1P03870 423 aa5.03□□□□□ -1.6
VPS33YLR396C PYC2P32327 1180 aaKnown RBP5.03□□□□□ -1.6
VPS33YLR396C SEC8P32855 1065 aa5.03□□□□□ -1.6
VPS33YLR396C YHL008CP38750 627 aa5.03□□□□□ -1.6
VPS33YLR396C PPT1P53043 513 aa5.03□□□□□ -1.6
VPS33YLR396C PRK1P40494 810 aa5.03□□□□□ -1.6
VPS33YLR396C RSC2Q06488 889 aa5.03□□□□□ -1.6
VPS33YLR396C TOS4Q06266 489 aa5.02□□□□□ -1.61
VPS33YLR396C OYE2Q03558 400 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 30.2 ms