RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B CHS7P38843 316 aa4.24□□□□□ -1.73
YLR227W-BYLR227W-B PTI1P39927 425 aaPredicted RBP4.24□□□□□ -1.73
YLR227W-BYLR227W-B LCD1Q04377 747 aa4.24□□□□□ -1.73
YLR227W-BYLR227W-B YLR257WQ06146 321 aaKnown RBP4.24□□□□□ -1.73
YLR227W-BYLR227W-B PER1P25625 357 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B PIP2P52960 996 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B HVG1P0CE11 249 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B SPO74P45819 413 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B AUS1Q08409 1394 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B CAF20P12962 161 aaKnown RBP4.23□□□□□ -1.73
YLR227W-BYLR227W-B SSM4P40318 1319 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B ALD5P40047 520 aaKnown RBP4.23□□□□□ -1.73
YLR227W-BYLR227W-B NET1P47035 1189 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B EIS1Q05050 843 aaKnown RBP4.23□□□□□ -1.73
YLR227W-BYLR227W-B MXR1P40029 184 aa4.23□□□□□ -1.73
YLR227W-BYLR227W-B KCC4P25389 1037 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B RTG3P38165 486 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B SIZ1Q04195 904 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B SUB2Q07478 446 aaKnown RBP4.22□□□□□ -1.73
YLR227W-BYLR227W-B ETP1P38748 585 aaKnown RBP4.22□□□□□ -1.73
YLR227W-BYLR227W-B DSN1P40568 576 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B ERT1P38140 529 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B APN2P38207 520 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B POM152P39685 1337 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B VMA2P16140 517 aaKnown RBP4.22□□□□□ -1.73
YLR227W-BYLR227W-B NPR2P39923 615 aa4.22□□□□□ -1.73
YLR227W-BYLR227W-B TAF1P46677 1066 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B UTP13Q05946 817 aaKnown RBP4.21□□□□□ -1.74
YLR227W-BYLR227W-B FAR10Q06001 478 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B VAS1P07806 1104 aaKnown RBP4.21□□□□□ -1.74
YLR227W-BYLR227W-B MNR2P35724 969 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B UIP5P36137 443 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B MRPL7P36519 292 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B VPS64Q03944 604 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B HAT1Q12341 374 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B RGT1P32862 1170 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B PCA1P38360 1216 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B TAF10Q12030 206 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B ENT3P47160 408 aa4.21□□□□□ -1.74
YLR227W-BYLR227W-B YMR265CQ03508 461 aaKnown RBP4.21□□□□□ -1.74
YLR227W-BYLR227W-B CHC1P22137 1653 aaKnown RBP4.2□□□□□ -1.74
YLR227W-BYLR227W-B KIN1P13185 1064 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B OXP1P28273 1286 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B SRP40P32583 406 aaPredicted RBP4.2□□□□□ -1.74
YLR227W-BYLR227W-B TPM2P40414 161 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B YML053CQ04978 212 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B FUB1P25659 250 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B PTC3P34221 468 aaKnown RBP4.2□□□□□ -1.74
YLR227W-BYLR227W-B NOP2P40991 618 aaKnown RBP4.2□□□□□ -1.74
YLR227W-BYLR227W-B MSC6Q08818 692 aaKnown RBP4.2□□□□□ -1.74
YLR227W-BYLR227W-B VMR1P38735 1592 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B PMA1P05030 918 aaKnown RBP4.2□□□□□ -1.74
YLR227W-BYLR227W-B AIM21P40563 679 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B SYF1Q04048 859 aaPredicted RBP4.2□□□□□ -1.74
YLR227W-BYLR227W-B YDR338CQ05497 695 aa4.2□□□□□ -1.74
YLR227W-BYLR227W-B MDL2P33311 773 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B RKM4Q12504 494 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B BNI1P41832 1953 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B DAN4P47179 1161 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B MSB3P48566 633 aaPredicted RBP4.19□□□□□ -1.74
YLR227W-BYLR227W-B PIG1Q06216 648 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B DIP2Q12220 943 aaPredicted RBP4.19□□□□□ -1.74
YLR227W-BYLR227W-B PKC1P24583 1151 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B CLU1Q03690 1277 aaKnown RBP4.19□□□□□ -1.74
YLR227W-BYLR227W-B GAS4Q08271 471 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B YBL028CP38202 106 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B YGR130CP53278 816 aa4.19□□□□□ -1.74
YLR227W-BYLR227W-B FPR4Q06205 392 aaPredicted RBP4.18□□□□□ -1.74
YLR227W-BYLR227W-B NCB2Q92317 146 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B YLR278CQ05854 1341 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B RPS24AP0CX31 135 aaKnown RBP4.18□□□□□ -1.74
YLR227W-BYLR227W-B RPS24BP0CX32 135 aaKnown RBP4.18□□□□□ -1.74
YLR227W-BYLR227W-B BUD14P27637 709 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B THI22Q06490 572 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B YCG1Q06680 1035 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B PSE1P32337 1089 aaKnown RBP4.18□□□□□ -1.74
YLR227W-BYLR227W-B CBF2P32504 956 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B SAH1P39954 449 aaKnown RBP4.18□□□□□ -1.74
YLR227W-BYLR227W-B HXT15P54854 567 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B DPL1Q05567 589 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B PGA3Q12746 312 aaKnown RBP4.18□□□□□ -1.74
YLR227W-BYLR227W-B PUF4P25339 888 aaKnown RBP RIP-Chip data4.18□□□□□ -1.74not detected
YLR227W-BYLR227W-B DPH6Q12429 685 aa4.18□□□□□ -1.74
YLR227W-BYLR227W-B BFA1P47113 574 aa4.17□□□□□ -1.74
YLR227W-BYLR227W-B SPO14P36126 1683 aa4.17□□□□□ -1.74
YLR227W-BYLR227W-B GGA2P38817 585 aaKnown RBP4.17□□□□□ -1.74
YLR227W-BYLR227W-B GSM1P42950 618 aa4.17□□□□□ -1.74
YLR227W-BYLR227W-B DBP1P24784 617 aaKnown RBP4.17□□□□□ -1.74
YLR227W-BYLR227W-B SUR7P54003 302 aa4.17□□□□□ -1.74
YLR227W-BYLR227W-B MSD1P15179 658 aaKnown RBP4.17□□□□□ -1.74
YLR227W-BYLR227W-B NUG1P40010 520 aaKnown RBP4.17□□□□□ -1.74
YLR227W-BYLR227W-B YGL082WP53155 381 aa4.17□□□□□ -1.74
YLR227W-BYLR227W-B TY3B-IQ7LHG5 1498 aaKnown RBP4.17□□□□□ -1.74
YLR227W-BYLR227W-B HSP104P31539 908 aaKnown RBP4.16□□□□□ -1.74
YLR227W-BYLR227W-B TY1B-AO13527 1196 aaKnown RBP4.16□□□□□ -1.74
YLR227W-BYLR227W-B CPS1P27614 576 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B GYP8P43570 497 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B LSB1P53281 241 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B EAF1Q06337 982 aa4.16□□□□□ -1.74
YLR227W-BYLR227W-B SSK22P25390 1331 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms