RNA–Protein interactions for RNA: YLR067C

PET309, Specific translational activator for the COX1 mRNA, yeastyeast

Gene PET309, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PET309YLR067C YKL091CP33324 310 aaKnown RBP2.53□□□□□ -2
PET309YLR067C HXT13P39924 564 aa2.53□□□□□ -2
PET309YLR067C PFD1P46988 109 aa2.53□□□□□ -2
PET309YLR067C HXT17P53631 564 aa2.53□□□□□ -2
PET309YLR067C HXT15P54854 567 aa2.53□□□□□ -2
PET309YLR067C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.53□□□□□ -2 RIP-Chip
PET309YLR067C TRS33Q99394 268 aa2.53□□□□□ -2
PET309YLR067C RPS31P05759 152 aaKnown RBP2.52□□□□□ -2.01
PET309YLR067C CDC34P14682 295 aa2.52□□□□□ -2.01
PET309YLR067C SRP40P32583 406 aaPredicted RBP2.52□□□□□ -2.01
PET309YLR067C VPS35P34110 944 aa2.52□□□□□ -2.01
PET309YLR067C MNR2P35724 969 aa2.52□□□□□ -2.01
PET309YLR067C EAP1P36041 632 aaKnown RBP2.52□□□□□ -2.01
PET309YLR067C SPR3P41901 512 aa2.52□□□□□ -2.01
PET309YLR067C YJL049WP47048 450 aa2.52□□□□□ -2.01
PET309YLR067C ARH1P48360 493 aa2.52□□□□□ -2.01
PET309YLR067C ZDS1P50111 915 aaKnown RBP2.52□□□□□ -2.01
PET309YLR067C TBF1Q02457 562 aa2.52□□□□□ -2.01
PET309YLR067C WSC3Q12215 556 aa2.52□□□□□ -2.01
PET309YLR067C ERR1P0CX10 437 aa2.52□□□□□ -2.01
PET309YLR067C ERR2P0CX11 437 aa2.52□□□□□ -2.01
PET309YLR067C RTT106P40161 455 aa2.52□□□□□ -2.01
PET309YLR067C RTS3P53289 263 aa2.52□□□□□ -2.01
PET309YLR067C YNL035CP53962 389 aaKnown RBP2.52□□□□□ -2.01
PET309YLR067C UFD2P54860 961 aa2.52□□□□□ -2.01
PET309YLR067C ATG20Q07528 640 aa2.52□□□□□ -2.01
PET309YLR067C FPR3P38911 411 aaKnown RBP2.51□□□□□ -2.01
PET309YLR067C MNN1P39106 762 aa2.51□□□□□ -2.01
PET309YLR067C RRN7P40992 514 aa2.51□□□□□ -2.01
PET309YLR067C ISU1Q03020 165 aa2.51□□□□□ -2.01
PET309YLR067C SSB1P11484 613 aaKnown RBP2.51□□□□□ -2.01
PET309YLR067C VMA3P25515 160 aa2.51□□□□□ -2.01
PET309YLR067C PPG1P32838 368 aa2.51□□□□□ -2.01
PET309YLR067C TIF11P38912 153 aaKnown RBP2.51□□□□□ -2.01
PET309YLR067C SSB2P40150 613 aaKnown RBP2.51□□□□□ -2.01
PET309YLR067C NUP82P40368 713 aa2.51□□□□□ -2.01
PET309YLR067C ULI1P43604 169 aa2.51□□□□□ -2.01
PET309YLR067C TGL2P54857 326 aa2.51□□□□□ -2.01
PET309YLR067C DNM1P54861 757 aa2.51□□□□□ -2.01
PET309YLR067C HAP5Q02516 242 aa2.51□□□□□ -2.01
PET309YLR067C YPL109CQ02981 657 aa2.51□□□□□ -2.01
PET309YLR067C YOL057WQ08225 711 aa2.51□□□□□ -2.01
PET309YLR067C BUD21Q08492 214 aaPredicted RBP2.51□□□□□ -2.01
PET309YLR067C STE6P12866 1290 aa2.51□□□□□ -2.01
PET309YLR067C PRE9P23638 258 aaKnown RBP2.51□□□□□ -2.01
PET309YLR067C GCD11P32481 527 aaKnown RBP2.51□□□□□ -2.01
PET309YLR067C AMN1P38285 549 aaPredicted RBP2.51□□□□□ -2.01
PET309YLR067C ATG3P40344 310 aa2.51□□□□□ -2.01
PET309YLR067C BNI4P53858 892 aa2.51□□□□□ -2.01
PET309YLR067C ESC2Q06340 456 aa2.51□□□□□ -2.01
PET309YLR067C OPI10Q08202 246 aa2.51□□□□□ -2.01
PET309YLR067C BDS1Q08347 646 aa2.51□□□□□ -2.01
PET309YLR067C TIF6Q12522 245 aaKnown RBP2.51□□□□□ -2.01
PET309YLR067C GCR1P07261 785 aa2.5□□□□□ -2.01
PET309YLR067C RPC31P17890 251 aa2.5□□□□□ -2.01
PET309YLR067C SEC61P32915 480 aa2.5□□□□□ -2.01
PET309YLR067C SEA4P38164 1038 aa2.5□□□□□ -2.01
PET309YLR067C PAF1P38351 445 aa2.5□□□□□ -2.01
PET309YLR067C OSW7P43611 510 aa2.5□□□□□ -2.01
PET309YLR067C GPG1P53130 126 aa2.5□□□□□ -2.01
PET309YLR067C FOX2Q02207 900 aaKnown RBP2.5□□□□□ -2.01
PET309YLR067C CDC53Q12018 815 aaKnown RBP2.5□□□□□ -2.01
PET309YLR067C PIF1P07271 859 aa2.5□□□□□ -2.01
PET309YLR067C HVG1P0CE11 249 aa2.5□□□□□ -2.01
PET309YLR067C MSN1P22148 382 aa2.5□□□□□ -2.01
PET309YLR067C SHM1P37292 490 aaPredicted RBP2.5□□□□□ -2.01
PET309YLR067C APP1P53933 587 aa2.5□□□□□ -2.01
PET309YLR067C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
PET309YLR067C CCP1P00431 361 aa2.49□□□□□ -2.01
PET309YLR067C PRT1P06103 763 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C RAD4P14736 754 aa2.49□□□□□ -2.01
PET309YLR067C MCM5P29496 775 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C MKK2P32491 506 aa2.49□□□□□ -2.01
PET309YLR067C FBP26P32604 452 aa2.49□□□□□ -2.01
PET309YLR067C PET112P33893 541 aa2.49□□□□□ -2.01
PET309YLR067C NTA1P40354 457 aa2.49□□□□□ -2.01
PET309YLR067C TPM2P40414 161 aa2.49□□□□□ -2.01
PET309YLR067C TYW3P53177 273 aa2.49□□□□□ -2.01
PET309YLR067C YNR029CP53729 429 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C GDE1Q02979 1223 aa2.49□□□□□ -2.01
PET309YLR067C BSC2Q05611 235 aa2.49□□□□□ -2.01
PET309YLR067C LDB19Q12502 818 aa2.49□□□□□ -2.01
PET309YLR067C FLP1P03870 423 aa2.49□□□□□ -2.01
PET309YLR067C MCM1P11746 286 aa2.49□□□□□ -2.01
PET309YLR067C RPL8AP17076 256 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C PRI2P20457 528 aa2.49□□□□□ -2.01
PET309YLR067C GCD6P32501 712 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C RTG1P32607 177 aa2.49□□□□□ -2.01
PET309YLR067C BET3P36149 193 aa2.49□□□□□ -2.01
PET309YLR067C RSP5P39940 809 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C HXT8P40886 569 aa2.49□□□□□ -2.01
PET309YLR067C TFG1P41895 735 aaPredicted RBP2.49□□□□□ -2.01
PET309YLR067C SAP155P43612 1002 aa2.49□□□□□ -2.01
PET309YLR067C SUT1P53032 299 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C INP54Q08227 384 aaKnown RBP2.49□□□□□ -2.01
PET309YLR067C CAN1P04817 590 aa2.48□□□□□ -2.01
PET309YLR067C MRT4P33201 236 aaKnown RBP2.48□□□□□ -2.01
PET309YLR067C PRP40P33203 583 aaKnown RBP2.48□□□□□ -2.01
PET309YLR067C RTA1P53047 317 aa2.48□□□□□ -2.01
PET309YLR067C PEX8P53248 589 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms