RNA–Protein interactions for RNA: YKL224C

PAU16, Transcript of Protein of unknown function, yeast

Gene PAU16, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAU16	YKL224C	SRC1	Q03707	834 aa		13.3	□□□□□ -0.28
PAU16	YKL224C	SWC3	P31376	625 aa		13.29	□□□□□ -0.28
PAU16	YKL224C	WRS1	Q12109	432 aa	Known RBP	13.28	□□□□□ -0.28
PAU16	YKL224C	RAD24	P32641	659 aa		13.27	□□□□□ -0.29
PAU16	YKL224C	PAM1	P37304	830 aa	Known RBP	13.27	□□□□□ -0.29
PAU16	YKL224C	RSC30	P38781	883 aa		13.26	□□□□□ -0.29
PAU16	YKL224C	YJL171C	P46992	396 aa		13.26	□□□□□ -0.29
PAU16	YKL224C	RBA50	Q04418	439 aa		13.26	□□□□□ -0.29
PAU16	YKL224C	ACK1	Q07622	623 aa	Predicted RBP	13.26	□□□□□ -0.29
PAU16	YKL224C	UBP12	P39538	1254 aa		13.25	□□□□□ -0.29
PAU16	YKL224C	NIT1	P40447	199 aa		13.25	□□□□□ -0.29
PAU16	YKL224C	JJJ2	P46997	583 aa		13.24	□□□□□ -0.29
PAU16	YKL224C	TAO3	P40468	2376 aa		13.23	□□□□□ -0.29
PAU16	YKL224C	ADR1	P07248	1323 aa		13.22	□□□□□ -0.29
PAU16	YKL224C	GAL2	P13181	574 aa		13.21	□□□□□ -0.29
PAU16	YKL224C	RPT3	P33298	428 aa	Known RBP	13.21	□□□□□ -0.29
PAU16	YKL224C	SNU66	Q12420	587 aa	Predicted RBP	13.21	□□□□□ -0.29
PAU16	YKL224C	NUG1	P40010	520 aa	Known RBP	13.2	□□□□□ -0.3
PAU16	YKL224C	PSF3	Q12146	194 aa		13.2	□□□□□ -0.3
PAU16	YKL224C	ASH1	P34233	588 aa		13.19	□□□□□ -0.3
PAU16	YKL224C	SUP35	P05453	685 aa	Known RBP	13.18	□□□□□ -0.3
PAU16	YKL224C	SUI2	P20459	304 aa	Known RBP	13.18	□□□□□ -0.3
PAU16	YKL224C	BOI2	P39969	1040 aa		13.18	□□□□□ -0.3
PAU16	YKL224C	JIP4	Q03361	876 aa		13.18	□□□□□ -0.3
PAU16	YKL224C	PEX29	Q03370	554 aa		13.18	□□□□□ -0.3
PAU16	YKL224C	NOP8	Q08287	484 aa	Predicted RBP	13.18	□□□□□ -0.3
PAU16	YKL224C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.17	□□□□□ -0.3	not detected
PAU16	YKL224C	YFH7	P43591	353 aa		13.17	□□□□□ -0.3
PAU16	YKL224C	KEL1	P38853	1164 aa	Known RBP	13.16	□□□□□ -0.3
PAU16	YKL224C	SGD1	Q06132	899 aa		13.16	□□□□□ -0.3
PAU16	YKL224C	YPR117W	Q06116	2489 aa		13.16	□□□□□ -0.3
PAU16	YKL224C	YPP1	P46951	817 aa		13.15	□□□□□ -0.3
PAU16	YKL224C	PUS6	P53294	404 aa		13.15	□□□□□ -0.3
PAU16	YKL224C	PPM2	Q08282	695 aa		13.15	□□□□□ -0.3
PAU16	YKL224C	GIN4	Q12263	1142 aa		13.15	□□□□□ -0.3
PAU16	YKL224C	FLO1	P32768	1537 aa		13.13	□□□□□ -0.31
PAU16	YKL224C	SLA1	P32790	1244 aa		13.13	□□□□□ -0.31
PAU16	YKL224C	CSI1	Q04368	295 aa		13.13	□□□□□ -0.31
PAU16	YKL224C	YLR225C	Q05948	407 aa	Known RBP	13.13	□□□□□ -0.31
PAU16	YKL224C	SNF3	P10870	884 aa		13.11	□□□□□ -0.31
PAU16	YKL224C	RAD53	P22216	821 aa		13.11	□□□□□ -0.31
PAU16	YKL224C	GLO3	P38682	493 aa	Known RBP	13.11	□□□□□ -0.31
PAU16	YKL224C	YIR042C	P40586	236 aa		13.11	□□□□□ -0.31
PAU16	YKL224C	SPR3	P41901	512 aa		13.1	□□□□□ -0.31
PAU16	YKL224C	AAD16	Q02895	342 aa		13.1	□□□□□ -0.31
PAU16	YKL224C	TPS3	P38426	1054 aa	Known RBP	13.09	□□□□□ -0.31
PAU16	YKL224C	APL6	P46682	809 aa		13.09	□□□□□ -0.31
PAU16	YKL224C	SEC18	P18759	758 aa	Known RBP	13.08	□□□□□ -0.32
PAU16	YKL224C	PTK1	P36002	662 aa	Predicted RBP	13.08	□□□□□ -0.32
PAU16	YKL224C	MAL31	P38156	614 aa		13.08	□□□□□ -0.32
PAU16	YKL224C	NSG2	P53898	299 aa		13.07	□□□□□ -0.32
PAU16	YKL224C	INM2	Q05533	292 aa		13.07	□□□□□ -0.32
PAU16	YKL224C	AI2	P03876	854 aa		13.06	□□□□□ -0.32
PAU16	YKL224C	PMA1	P05030	918 aa	Known RBP	13.06	□□□□□ -0.32
PAU16	YKL224C	RPS19A	P07280	144 aa	Known RBP	13.06	□□□□□ -0.32
PAU16	YKL224C	RPS19B	P07281	144 aa	Predicted RBP	13.06	□□□□□ -0.32
PAU16	YKL224C	ADP1	P25371	1049 aa		13.06	□□□□□ -0.32
PAU16	YKL224C	GYP5	Q12344	894 aa		13.06	□□□□□ -0.32
PAU16	YKL224C	RPP0	P05317	312 aa	Known RBP	13.05	□□□□□ -0.32
PAU16	YKL224C	HAL5	P38970	855 aa	Known RBP	13.05	□□□□□ -0.32
PAU16	YKL224C	IXR1	P33417	597 aa		13.04	□□□□□ -0.32
PAU16	YKL224C	YKR023W	P36119	530 aa	Known RBP	13.04	□□□□□ -0.32
PAU16	YKL224C	YNL193W	P53870	558 aa		13.04	□□□□□ -0.32
PAU16	YKL224C	MDL2	P33311	773 aa		13.03	□□□□□ -0.32
PAU16	YKL224C	ERG7	P38604	731 aa		13.03	□□□□□ -0.32
PAU16	YKL224C	MAK21	Q12176	1025 aa	Known RBP	13.03	□□□□□ -0.32
PAU16	YKL224C	ULP1	Q02724	621 aa		13.02	□□□□□ -0.33
PAU16	YKL224C	RRI2	Q12348	645 aa		13.02	□□□□□ -0.33
PAU16	YKL224C	PAH1	P32567	862 aa		13.01	□□□□□ -0.33
PAU16	YKL224C	VPS27	P40343	622 aa	Known RBP	13.01	□□□□□ -0.33
PAU16	YKL224C	RPN7	Q06103	429 aa	Known RBP	13.01	□□□□□ -0.33
PAU16	YKL224C	TUB2	P02557	457 aa	Known RBP	13	□□□□□ -0.33
PAU16	YKL224C	ACA1	P39970	489 aa		13	□□□□□ -0.33
PAU16	YKL224C	PSF2	P40359	213 aa		13	□□□□□ -0.33
PAU16	YKL224C	NET1	P47035	1189 aa		13	□□□□□ -0.33
PAU16	YKL224C	YDJ1	P25491	409 aa	Known RBP	12.99	□□□□□ -0.33
PAU16	YKL224C	OCT1	P35999	772 aa		12.98	□□□□□ -0.33
PAU16	YKL224C	PIF1	P07271	859 aa		12.97	□□□□□ -0.33
PAU16	YKL224C	SPT21	P35209	758 aa		12.97	□□□□□ -0.33
PAU16	YKL224C	YBL028C	P38202	106 aa		12.97	□□□□□ -0.33
PAU16	YKL224C	PCL8	Q08966	492 aa		12.96	□□□□□ -0.33
PAU16	YKL224C	SSF1	P38789	453 aa	Predicted RBP	12.95	□□□□□ -0.34
PAU16	YKL224C	CFT2	Q12102	859 aa	Predicted RBP	12.95	□□□□□ -0.34
PAU16	YKL224C	KIN1	P13185	1064 aa		12.94	□□□□□ -0.34
PAU16	YKL224C	CDC60	P26637	1090 aa	Known RBP	12.94	□□□□□ -0.34
PAU16	YKL224C	ATG1	P53104	897 aa		12.94	□□□□□ -0.34
PAU16	YKL224C	FBP1	P09201	348 aa		12.93	□□□□□ -0.34
PAU16	YKL224C	MCD4	P36051	919 aa		12.93	□□□□□ -0.34
PAU16	YKL224C	BOI1	P38041	980 aa	Known RBP	12.93	□□□□□ -0.34
PAU16	YKL224C	YIL092W	P40497	633 aa		12.93	□□□□□ -0.34
PAU16	YKL224C	NOP2	P40991	618 aa	Known RBP	12.93	□□□□□ -0.34
PAU16	YKL224C	CDC45	Q08032	650 aa		12.93	□□□□□ -0.34
PAU16	YKL224C	DAL5	P15365	543 aa		12.92	□□□□□ -0.34
PAU16	YKL224C	GRX7	P38068	203 aa		12.92	□□□□□ -0.34
PAU16	YKL224C	MSH4	P40965	878 aa	Predicted RBP	12.92	□□□□□ -0.34
PAU16	YKL224C	PIP2	P52960	996 aa		12.92	□□□□□ -0.34
PAU16	YKL224C	RVB2	Q12464	471 aa	Known RBP	12.92	□□□□□ -0.34
PAU16	YKL224C	GCD7	P32502	381 aa	Predicted RBP	12.91	□□□□□ -0.34
PAU16	YKL224C	VPS62	P53285	467 aa		12.91	□□□□□ -0.34
PAU16	YKL224C	YDL124W	Q07551	312 aa	Known RBP	12.91	□□□□□ -0.34

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms