RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W YNL011CP53980 444 aa3.59□□□□□ -1.83
PHD1YKL043W YMR196WQ04336 1088 aa3.59□□□□□ -1.83
PHD1YKL043W PSE1P32337 1089 aaKnown RBP3.58□□□□□ -1.84
PHD1YKL043W MPE1P35728 441 aaKnown RBP3.58□□□□□ -1.84
PHD1YKL043W PBY1P38254 753 aa3.58□□□□□ -1.84
PHD1YKL043W DSN1P40568 576 aa3.58□□□□□ -1.84
PHD1YKL043W HYR1P40581 163 aaKnown RBP3.58□□□□□ -1.84
PHD1YKL043W CEP3P40969 608 aa3.58□□□□□ -1.84
PHD1YKL043W ITC1P53125 1264 aa3.58□□□□□ -1.84
PHD1YKL043W PRP3Q03338 469 aaPredicted RBP3.58□□□□□ -1.84
PHD1YKL043W PUS5Q06244 254 aa3.58□□□□□ -1.84
PHD1YKL043W YDL144CQ07589 356 aa3.58□□□□□ -1.84
PHD1YKL043W MAM3Q12296 706 aa3.58□□□□□ -1.84
PHD1YKL043W YOL087CQ99247 1116 aa3.58□□□□□ -1.84
PHD1YKL043W SIR4P11978 1358 aa3.58□□□□□ -1.84
PHD1YKL043W BCK1Q01389 1478 aa3.58□□□□□ -1.84
PHD1YKL043W PET111P08468 800 aa3.57□□□□□ -1.84
PHD1YKL043W TAF13P11747 167 aa3.57□□□□□ -1.84
PHD1YKL043W GAR1P28007 205 aaKnown RBP3.57□□□□□ -1.84
PHD1YKL043W SIC1P38634 284 aa3.57□□□□□ -1.84
PHD1YKL043W BDH2P39713 417 aa3.57□□□□□ -1.84
PHD1YKL043W ALD4P46367 519 aaKnown RBP3.57□□□□□ -1.84
PHD1YKL043W NUP192P47054 1683 aa3.57□□□□□ -1.84
PHD1YKL043W ROM2P51862 1356 aaKnown RBP3.57□□□□□ -1.84
PHD1YKL043W TUB4P53378 473 aa3.57□□□□□ -1.84
PHD1YKL043W TY1B-NL2Q99337 1749 aaKnown RBP3.57□□□□□ -1.84
PHD1YKL043W CDC4P07834 779 aa3.56□□□□□ -1.84
PHD1YKL043W MOD5P07884 428 aa3.56□□□□□ -1.84
PHD1YKL043W SRS2P12954 1174 aa3.56□□□□□ -1.84
PHD1YKL043W SUI2P20459 304 aaKnown RBP3.56□□□□□ -1.84
PHD1YKL043W CLB1P24868 471 aa3.56□□□□□ -1.84
PHD1YKL043W PAT1P25644 796 aaKnown RBP3.56□□□□□ -1.84
PHD1YKL043W DEP1P31385 405 aa3.56□□□□□ -1.84
PHD1YKL043W CBF5P33322 483 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
PHD1YKL043W MED8P38304 223 aa3.56□□□□□ -1.84
PHD1YKL043W RRT14P40470 206 aa3.56□□□□□ -1.84
PHD1YKL043W NUP42P49686 430 aaKnown RBP3.56□□□□□ -1.84
PHD1YKL043W YNR029CP53729 429 aaKnown RBP3.56□□□□□ -1.84
PHD1YKL043W KRE33P53914 1056 aaKnown RBP3.56□□□□□ -1.84
PHD1YKL043W ORC1P54784 914 aaPredicted RBP3.56□□□□□ -1.84
PHD1YKL043W TAF8Q03750 510 aa3.56□□□□□ -1.84
PHD1YKL043W NOP8Q08287 484 aaPredicted RBP3.56□□□□□ -1.84
PHD1YKL043W MET32Q12041 191 aa3.56□□□□□ -1.84
PHD1YKL043W AUS1Q08409 1394 aa3.55□□□□□ -1.84
PHD1YKL043W ESL2P36168 1195 aa3.55□□□□□ -1.84
PHD1YKL043W DSF2P38213 736 aa3.55□□□□□ -1.84
PHD1YKL043W ECM1P39715 212 aa3.55□□□□□ -1.84
PHD1YKL043W RIO2P40160 425 aaKnown RBP3.55□□□□□ -1.84
PHD1YKL043W RSC1P53236 928 aa3.55□□□□□ -1.84
PHD1YKL043W NNF2P53253 936 aa3.55□□□□□ -1.84
PHD1YKL043W HST1P53685 503 aa3.55□□□□□ -1.84
PHD1YKL043W NIS1P53939 407 aa3.55□□□□□ -1.84
PHD1YKL043W MRS2Q01926 470 aa3.55□□□□□ -1.84
PHD1YKL043W YPL062WQ02781 134 aa3.55□□□□□ -1.84
PHD1YKL043W RAD3P06839 778 aa3.54□□□□□ -1.84
PHD1YKL043W DIT2P21595 489 aa3.54□□□□□ -1.84
PHD1YKL043W MRC1P25588 1096 aa3.54□□□□□ -1.84
PHD1YKL043W MSH1P25846 959 aa3.54□□□□□ -1.84
PHD1YKL043W RPN12P32496 274 aa3.54□□□□□ -1.84
PHD1YKL043W MIC60P36112 540 aa3.54□□□□□ -1.84
PHD1YKL043W RSM25P40496 264 aa3.54□□□□□ -1.84
PHD1YKL043W POL32P47110 350 aa3.54□□□□□ -1.84
PHD1YKL043W HED1Q03937 162 aa3.54□□□□□ -1.84
PHD1YKL043W BMS1Q08965 1183 aaKnown RBP3.54□□□□□ -1.84
PHD1YKL043W SEC39Q12745 709 aa3.54□□□□□ -1.84
PHD1YKL043W MSH3P25336 1018 aa3.53□□□□□ -1.84
PHD1YKL043W CLB5P30283 435 aa3.53□□□□□ -1.84
PHD1YKL043W MET22P32179 357 aa3.53□□□□□ -1.84
PHD1YKL043W ZUO1P32527 433 aaKnown RBP3.53□□□□□ -1.84
PHD1YKL043W RTT107P38850 1070 aa3.53□□□□□ -1.84
PHD1YKL043W YIL092WP40497 633 aa3.53□□□□□ -1.84
PHD1YKL043W CIR1P42940 261 aa3.53□□□□□ -1.84
PHD1YKL043W RCM1P53972 490 aa3.53□□□□□ -1.84
PHD1YKL043W VPS30Q02948 557 aa3.53□□□□□ -1.84
PHD1YKL043W SML1Q04964 104 aa3.53□□□□□ -1.84
PHD1YKL043W RRP15Q06511 250 aaPredicted RBP3.53□□□□□ -1.84
PHD1YKL043W YVC1Q12324 675 aa3.53□□□□□ -1.84
PHD1YKL043W SFI1Q12369 946 aa3.53□□□□□ -1.84
PHD1YKL043W NUP145P49687 1317 aa3.52□□□□□ -1.85
PHD1YKL043W CYC8P14922 966 aa3.52□□□□□ -1.85
PHD1YKL043W PET123P17558 318 aa3.52□□□□□ -1.85
PHD1YKL043W MCM2P29469 868 aa3.52□□□□□ -1.85
PHD1YKL043W SAP190P36123 1033 aa3.52□□□□□ -1.85
PHD1YKL043W YNL115CP53925 644 aa3.52□□□□□ -1.85
PHD1YKL043W GCR2Q01722 534 aa3.52□□□□□ -1.85
PHD1YKL043W PUF6Q04373 656 aaKnown RBP3.52□□□□□ -1.85
PHD1YKL043W ETT1Q08421 412 aaKnown RBP3.52□□□□□ -1.85
PHD1YKL043W RRP5Q05022 1729 aaKnown RBP3.52□□□□□ -1.85
PHD1YKL043W LYS2P07702 1392 aa3.51□□□□□ -1.85
PHD1YKL043W RAD50P12753 1312 aa3.51□□□□□ -1.85
PHD1YKL043W ARD1P07347 238 aaPredicted RBP3.51□□□□□ -1.85
PHD1YKL043W KAR3P17119 729 aa3.51□□□□□ -1.85
PHD1YKL043W SIT4P20604 311 aa3.51□□□□□ -1.85
PHD1YKL043W SPE2P21182 396 aa3.51□□□□□ -1.85
PHD1YKL043W RAD51P25454 400 aa3.51□□□□□ -1.85
PHD1YKL043W PPH3P32345 308 aa3.51□□□□□ -1.85
PHD1YKL043W ELM1P32801 640 aa3.51□□□□□ -1.85
PHD1YKL043W ASH1P34233 588 aa3.51□□□□□ -1.85
PHD1YKL043W PXR1P53335 271 aaPredicted RBP3.51□□□□□ -1.85
PHD1YKL043W MDG1P53885 366 aa3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 412.6 ms