RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NDC80	YIL144W	JJJ2	P46997	583 aa		4.84	□□□□□ -1.64
NDC80	YIL144W	ASF1	P32447	279 aa		4.83	□□□□□ -1.64
NDC80	YIL144W	DLD1	P32891	587 aa		4.83	□□□□□ -1.64
NDC80	YIL144W	RTT106	P40161	455 aa		4.83	□□□□□ -1.64
NDC80	YIL144W	TOS4	Q06266	489 aa		4.83	□□□□□ -1.64
NDC80	YIL144W	DAK2	P43550	591 aa		4.82	□□□□□ -1.64
NDC80	YIL144W	PTK2	P47116	818 aa	Known RBP	4.82	□□□□□ -1.64
NDC80	YIL144W	MSN5	P52918	1224 aa		4.82	□□□□□ -1.64
NDC80	YIL144W	UTP4	Q06679	776 aa	Known RBP	4.82	□□□□□ -1.64
NDC80	YIL144W	ALA1	P40825	983 aa	Known RBP	4.82	□□□□□ -1.64
NDC80	YIL144W	HXT8	P40886	569 aa		4.82	□□□□□ -1.64
NDC80	YIL144W	RGD2	P43556	714 aa		4.82	□□□□□ -1.64
NDC80	YIL144W	ORC1	P54784	914 aa	Predicted RBP	4.82	□□□□□ -1.64
NDC80	YIL144W	OYE2	Q03558	400 aa	Known RBP	4.82	□□□□□ -1.64
NDC80	YIL144W	IOC4	Q04213	475 aa		4.82	□□□□□ -1.64
NDC80	YIL144W	QDR2	P40474	542 aa		4.81	□□□□□ -1.64
NDC80	YIL144W	FYV10	P40492	516 aa		4.81	□□□□□ -1.64
NDC80	YIL144W	LSB3	P43603	459 aa	Known RBP	4.81	□□□□□ -1.64
NDC80	YIL144W	NOP7	P53261	605 aa	Known RBP	4.81	□□□□□ -1.64
NDC80	YIL144W	UFD2	P54860	961 aa		4.81	□□□□□ -1.64
NDC80	YIL144W	AIM44	Q99299	758 aa		4.81	□□□□□ -1.64
NDC80	YIL144W	MSN1	P22148	382 aa		4.81	□□□□□ -1.64
NDC80	YIL144W	MET1	P36150	593 aa		4.81	□□□□□ -1.64
NDC80	YIL144W	YNL011C	P53980	444 aa		4.81	□□□□□ -1.64
NDC80	YIL144W	ARG82	P07250	355 aa		4.8	□□□□□ -1.64
NDC80	YIL144W	IRE1	P32361	1115 aa		4.8	□□□□□ -1.64
NDC80	YIL144W	DAL1	P32375	460 aa		4.8	□□□□□ -1.64
NDC80	YIL144W	RSC4	Q02206	625 aa		4.8	□□□□□ -1.64
NDC80	YIL144W	RPC31	P17890	251 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	RPT1	P33299	467 aa	Known RBP	4.79	□□□□□ -1.64
NDC80	YIL144W	MET10	P39692	1035 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	ICP55	P40051	511 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	CDC55	Q00362	526 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	SPR28	Q04921	423 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	PSH1	Q12161	406 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	MCM2	P29469	868 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	YJR098C	P47139	656 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
NDC80	YIL144W	HPF1	Q05164	967 aa		4.79	□□□□□ -1.64
NDC80	YIL144W	PDC6	P26263	563 aa	Known RBP	4.78	□□□□□ -1.64
NDC80	YIL144W	LDH1	P38139	375 aa		4.78	□□□□□ -1.64
NDC80	YIL144W	BSD2	P38356	321 aa		4.78	□□□□□ -1.64
NDC80	YIL144W	TIF6	Q12522	245 aa	Known RBP	4.78	□□□□□ -1.64
NDC80	YIL144W	DYS1	P38791	387 aa		4.77	□□□□□ -1.65
NDC80	YIL144W	VTC4	P47075	721 aa		4.77	□□□□□ -1.65
NDC80	YIL144W	KAP122	P32767	1081 aa		4.77	□□□□□ -1.65
NDC80	YIL144W	MGE1	P38523	228 aa		4.77	□□□□□ -1.65
NDC80	YIL144W	NTA1	P40354	457 aa		4.77	□□□□□ -1.65
NDC80	YIL144W	CTR9	P89105	1077 aa		4.77	□□□□□ -1.65
NDC80	YIL144W	PUS1	Q12211	544 aa	Known RBP	4.77	□□□□□ -1.65
NDC80	YIL144W	MAG2	Q06436	670 aa	Known RBP	4.76	□□□□□ -1.65
NDC80	YIL144W	OPT2	Q06593	877 aa		4.76	□□□□□ -1.65
NDC80	YIL144W	SMC1	P32908	1225 aa		4.76	□□□□□ -1.65
NDC80	YIL144W	RAD55	P38953	406 aa		4.76	□□□□□ -1.65
NDC80	YIL144W	MTO1	P53070	669 aa		4.76	□□□□□ -1.65
NDC80	YIL144W	COB	P00163	385 aa		4.75	□□□□□ -1.65
NDC80	YIL144W	LEU1	P07264	779 aa	Known RBP	4.75	□□□□□ -1.65
NDC80	YIL144W	PSY2	P40164	858 aa		4.75	□□□□□ -1.65
NDC80	YIL144W	NUP85	P46673	744 aa		4.75	□□□□□ -1.65
NDC80	YIL144W	BSC2	Q05611	235 aa		4.75	□□□□□ -1.65
NDC80	YIL144W	TCB1	Q12466	1186 aa		4.75	□□□□□ -1.65
NDC80	YIL144W	CUS1	Q02554	436 aa	Predicted RBP	4.74	□□□□□ -1.65
NDC80	YIL144W	YLR346C	Q06139	101 aa		4.74	□□□□□ -1.65
NDC80	YIL144W	EMG1	Q06287	252 aa	Known RBP	4.74	□□□□□ -1.65
NDC80	YIL144W	SRF1	Q12516	437 aa		4.74	□□□□□ -1.65
NDC80	YIL144W	DUR3	P33413	735 aa		4.74	□□□□□ -1.65
NDC80	YIL144W	IRS4	P36115	615 aa	Known RBP	4.74	□□□□□ -1.65
NDC80	YIL144W	AHP1	P38013	176 aa	Known RBP	4.74	□□□□□ -1.65
NDC80	YIL144W	GIP1	P38229	639 aa		4.74	□□□□□ -1.65
NDC80	YIL144W	RPS26A	P39938	119 aa	Known RBP	4.74	□□□□□ -1.65
NDC80	YIL144W	RPS26B	P39939	119 aa	Known RBP	4.74	□□□□□ -1.65
NDC80	YIL144W	YIR007W	P40566	764 aa		4.74	□□□□□ -1.65
NDC80	YIL144W	YOR296W	Q08748	1289 aa		4.74	□□□□□ -1.65
NDC80	YIL144W	VPS35	P34110	944 aa		4.73	□□□□□ -1.65
NDC80	YIL144W	FAA3	P39002	694 aa		4.73	□□□□□ -1.65
NDC80	YIL144W	SKP1	P52286	194 aa		4.73	□□□□□ -1.65
NDC80	YIL144W	ITC1	P53125	1264 aa		4.73	□□□□□ -1.65
NDC80	YIL144W	YNR040W	P53736	256 aa		4.73	□□□□□ -1.65
NDC80	YIL144W	ISW1	P38144	1129 aa		4.73	□□□□□ -1.65
NDC80	YIL144W	LSC2	P53312	427 aa		4.73	□□□□□ -1.65
NDC80	YIL144W	INP54	Q08227	384 aa	Known RBP	4.73	□□□□□ -1.65
NDC80	YIL144W	HXK1	P04806	485 aa	Known RBP	4.72	□□□□□ -1.65
NDC80	YIL144W	GCD6	P32501	712 aa	Known RBP	4.72	□□□□□ -1.65
NDC80	YIL144W	UGA4	P32837	571 aa		4.72	□□□□□ -1.65
NDC80	YIL144W	SAM37	P50110	327 aa		4.72	□□□□□ -1.65
NDC80	YIL144W	SVF1	Q05515	481 aa		4.72	□□□□□ -1.65
NDC80	YIL144W	NOC3	Q07896	663 aa	Predicted RBP	4.72	□□□□□ -1.65
NDC80	YIL144W	CDC19	P00549	500 aa	Known RBP	4.71	□□□□□ -1.65
NDC80	YIL144W	CYC8	P14922	966 aa		4.71	□□□□□ -1.65
NDC80	YIL144W	FIR1	P40020	876 aa		4.71	□□□□□ -1.65
NDC80	YIL144W	NAM8	Q00539	523 aa	Known RBP	4.71	□□□□□ -1.65
NDC80	YIL144W	JIP5	Q06214	492 aa	Predicted RBP	4.71	□□□□□ -1.65
NDC80	YIL144W	FLP1	P03870	423 aa		4.71	□□□□□ -1.66
NDC80	YIL144W	RGP1	P16664	663 aa		4.71	□□□□□ -1.66
NDC80	YIL144W	YTA6	P40328	754 aa		4.71	□□□□□ -1.66
NDC80	YIL144W	YIL165C	P40446	119 aa		4.71	□□□□□ -1.66
NDC80	YIL144W	YGR122W	P53272	402 aa		4.71	□□□□□ -1.66
NDC80	YIL144W	GLY1	P37303	387 aa	Known RBP	4.7	□□□□□ -1.66
NDC80	YIL144W	UBP15	P50101	1230 aa		4.7	□□□□□ -1.66
NDC80	YIL144W	MRPL16	P38064	232 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 63.8 ms