RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C HST1P53685 503 aa8.97□□□□□ -0.97
SNP1YIL061C HRQ1Q05549 1077 aa8.97□□□□□ -0.97
SNP1YIL061C BIK1P11709 440 aa8.96□□□□□ -0.98
SNP1YIL061C TOS1P38288 455 aa8.96□□□□□ -0.98
SNP1YIL061C GLO3P38682 493 aaKnown RBP8.96□□□□□ -0.98
SNP1YIL061C PKH3Q03306 898 aaPredicted RBP8.96□□□□□ -0.98
SNP1YIL061C NGR1P32831 672 aaKnown RBP8.95□□□□□ -0.98
SNP1YIL061C KRI1P42846 591 aaKnown RBP8.95□□□□□ -0.98
SNP1YIL061C CWH41P53008 833 aa8.95□□□□□ -0.98
SNP1YIL061C SYF1Q04048 859 aaPredicted RBP8.95□□□□□ -0.98
SNP1YIL061C CTI6Q08923 506 aa8.95□□□□□ -0.98
SNP1YIL061C LAM4P38800 1345 aa8.95□□□□□ -0.98
SNP1YIL061C MGM1P32266 881 aa8.94□□□□□ -0.98
SNP1YIL061C NUG1P40010 520 aaKnown RBP8.94□□□□□ -0.98
SNP1YIL061C THI3Q07471 609 aa8.94□□□□□ -0.98
SNP1YIL061C RRI2Q12348 645 aa8.94□□□□□ -0.98
SNP1YIL061C DPH6Q12429 685 aa8.94□□□□□ -0.98
SNP1YIL061C RPL19AP0CX82 189 aaKnown RBP8.93□□□□□ -0.98
SNP1YIL061C RPL19BP0CX83 189 aaPredicted RBP8.93□□□□□ -0.98
SNP1YIL061C KNS1P32350 737 aaPredicted RBP8.93□□□□□ -0.98
SNP1YIL061C ICP55P40051 511 aa8.93□□□□□ -0.98
SNP1YIL061C CIR1P42940 261 aa8.93□□□□□ -0.98
SNP1YIL061C SRC1Q03707 834 aa8.93□□□□□ -0.98
SNP1YIL061C COG8Q04632 607 aa8.93□□□□□ -0.98
SNP1YIL061C KAR5Q04746 504 aa8.93□□□□□ -0.98
SNP1YIL061C BDF2Q07442 638 aa8.93□□□□□ -0.98
SNP1YIL061C RIX7Q07844 837 aaKnown RBP8.93□□□□□ -0.98
SNP1YIL061C NPL4P33755 580 aa8.92□□□□□ -0.98
SNP1YIL061C CIC1P38779 376 aaKnown RBP8.92□□□□□ -0.98
SNP1YIL061C GTT3P39996 337 aa8.92□□□□□ -0.98
SNP1YIL061C YMR147WP40218 223 aaKnown RBP8.92□□□□□ -0.98
SNP1YIL061C ALD3P54114 506 aa8.92□□□□□ -0.98
SNP1YIL061C TAH18Q12181 623 aa8.92□□□□□ -0.98
SNP1YIL061C ALD2P47771 506 aa8.91□□□□□ -0.98
SNP1YIL061C ECM23Q02710 187 aa8.91□□□□□ -0.98
SNP1YIL061C AIM44Q99299 758 aa8.91□□□□□ -0.98
SNP1YIL061C KEX1P09620 729 aa8.9□□□□□ -0.98
SNP1YIL061C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
SNP1YIL061C TTI1P36097 1038 aa8.9□□□□□ -0.98
SNP1YIL061C MET1P36150 593 aa8.9□□□□□ -0.98
SNP1YIL061C CTF18P49956 741 aa8.9□□□□□ -0.98
SNP1YIL061C KRE33P53914 1056 aaKnown RBP8.9□□□□□ -0.98
SNP1YIL061C PSK2Q08217 1101 aa8.9□□□□□ -0.98
SNP1YIL061C SSF2Q12153 453 aaPredicted RBP8.9□□□□□ -0.98
SNP1YIL061C PGA3Q12746 312 aaKnown RBP8.9□□□□□ -0.98
SNP1YIL061C MATALPHA2P0CY08 210 aa8.89□□□□□ -0.99
SNP1YIL061C HMLALPHA2P0CY09 210 aa8.89□□□□□ -0.99
SNP1YIL061C PEP3P27801 918 aa8.89□□□□□ -0.99
SNP1YIL061C ELM1P32801 640 aa8.89□□□□□ -0.99
SNP1YIL061C GEF1P37020 779 aa8.89□□□□□ -0.99
SNP1YIL061C SPL2P38839 148 aa8.89□□□□□ -0.99
SNP1YIL061C YPL150WQ12152 901 aa8.89□□□□□ -0.99
SNP1YIL061C CYB2P00175 591 aa8.88□□□□□ -0.99
SNP1YIL061C SIT4P20604 311 aa8.88□□□□□ -0.99
SNP1YIL061C FBP26P32604 452 aa8.88□□□□□ -0.99
SNP1YIL061C PRX1P34227 261 aaKnown RBP8.88□□□□□ -0.99
SNP1YIL061C YHL017WP38745 532 aa8.88□□□□□ -0.99
SNP1YIL061C VID28P40547 921 aa8.88□□□□□ -0.99
SNP1YIL061C IOC3P43596 787 aa8.88□□□□□ -0.99
SNP1YIL061C ENP2P48234 707 aaKnown RBP8.88□□□□□ -0.99
SNP1YIL061C HPC2Q01448 625 aa8.88□□□□□ -0.99
SNP1YIL061C PEX19Q07418 342 aa8.88□□□□□ -0.99
SNP1YIL061C ELG1Q12050 791 aa8.88□□□□□ -0.99
SNP1YIL061C FIG2P25653 1609 aa8.87□□□□□ -0.99
SNP1YIL061C MBR1P23493 339 aa8.87□□□□□ -0.99
SNP1YIL061C KRE2P27809 442 aa8.87□□□□□ -0.99
SNP1YIL061C FRD1P32614 470 aaKnown RBP8.87□□□□□ -0.99
SNP1YIL061C GRX7P38068 203 aa8.87□□□□□ -0.99
SNP1YIL061C PFF1P38244 976 aa8.87□□□□□ -0.99
SNP1YIL061C CRG1P38892 291 aaRIP-Chip data8.87□□□□□ -0.99not detected
SNP1YIL061C RVS167P39743 482 aaKnown RBP8.87□□□□□ -0.99
SNP1YIL061C IRC8P47046 822 aa8.87□□□□□ -0.99
SNP1YIL061C PEX14P53112 341 aa8.87□□□□□ -0.99
SNP1YIL061C YGL081WP53156 320 aa8.87□□□□□ -0.99
SNP1YIL061C PIL1P53252 339 aaKnown RBP8.87□□□□□ -0.99
SNP1YIL061C INM2Q05533 292 aa8.87□□□□□ -0.99
SNP1YIL061C PPM2Q08282 695 aa8.87□□□□□ -0.99
SNP1YIL061C CPA2P03965 1118 aaKnown RBP8.86□□□□□ -0.99
SNP1YIL061C SSA2P10592 639 aaKnown RBP8.86□□□□□ -0.99
SNP1YIL061C LCB1P25045 558 aaKnown RBP8.86□□□□□ -0.99
SNP1YIL061C RPN12P32496 274 aa8.86□□□□□ -0.99
SNP1YIL061C YBL086CP38177 466 aa8.86□□□□□ -0.99
SNP1YIL061C RSM25P40496 264 aa8.86□□□□□ -0.99
SNP1YIL061C YIR042CP40586 236 aa8.86□□□□□ -0.99
SNP1YIL061C YKE2P52553 114 aa8.86□□□□□ -0.99
SNP1YIL061C RPT4P53549 437 aaKnown RBP8.86□□□□□ -0.99
SNP1YIL061C ARP5P53946 755 aa8.86□□□□□ -0.99
SNP1YIL061C YLR407WQ06070 228 aa8.86□□□□□ -0.99
SNP1YIL061C SPN1Q06505 410 aaPredicted RBP8.86□□□□□ -0.99
SNP1YIL061C IRC3Q06683 689 aa8.86□□□□□ -0.99
SNP1YIL061C IMP2'P32351 346 aa8.85□□□□□ -0.99
SNP1YIL061C RPN1P38764 993 aaKnown RBP8.85□□□□□ -0.99
SNP1YIL061C ERO1Q03103 563 aa8.85□□□□□ -0.99
SNP1YIL061C COQ1P18900 473 aa8.84□□□□□ -0.99
SNP1YIL061C RKM3P38222 552 aa8.84□□□□□ -0.99
SNP1YIL061C IRC4Q03036 179 aa8.84□□□□□ -0.99
SNP1YIL061C SAS4Q04003 481 aa8.84□□□□□ -0.99
SNP1YIL061C UBX2Q04228 584 aa8.84□□□□□ -0.99
SNP1YIL061C ESF1Q06344 628 aaKnown RBP8.84□□□□□ -0.99
SNP1YIL061C APC11Q12157 165 aa8.84□□□□□ -0.99
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms