RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	MRX12	P47084	519 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	GCR2	Q01722	534 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	AUS1	Q08409	1394 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	ATE1	P16639	503 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	SPE2	P21182	396 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	SEC6	P32844	805 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	TIF3	P34167	436 aa	Known RBP	5.1	□□□□□ -1.59
MDR1	YGR100W	YLF2	P38746	405 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	SHE4	P51534	789 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	BET4	Q00618	327 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	TSR2	Q06672	205 aa	Known RBP	5.1	□□□□□ -1.59
MDR1	YGR100W	SNF2	P22082	1703 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	FAR1	P21268	830 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	BUD2	P33314	1104 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	NPR3	P38742	1146 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	YIR042C	P40586	236 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	ALD4	P46367	519 aa	Known RBP	5.1	□□□□□ -1.59
MDR1	YGR100W	SGD1	Q06132	899 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	YLR257W	Q06146	321 aa	Known RBP	5.1	□□□□□ -1.59
MDR1	YGR100W	SFH1	Q06168	426 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	OMS1	Q06668	471 aa		5.1	□□□□□ -1.59
MDR1	YGR100W	TRL1	P09880	827 aa	Known RBP	5.09	□□□□□ -1.59
MDR1	YGR100W	DAL7	P21826	554 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
MDR1	YGR100W	IES2	P40154	320 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	SFB2	P53953	876 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	SEC5	P89102	971 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	RBA50	Q04418	439 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	THI22	Q06490	572 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	YPR097W	Q06839	1073 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	BUD21	Q08492	214 aa	Predicted RBP	5.09	□□□□□ -1.59
MDR1	YGR100W	TY1B-DR3	Q99231	1755 aa		5.09	□□□□□ -1.59
MDR1	YGR100W	TRP5	P00931	707 aa	Known RBP	5.09	□□□□□ -1.6
MDR1	YGR100W	ECM32	P32644	1121 aa	Known RBP	5.09	□□□□□ -1.6
MDR1	YGR100W	SMY2	P32909	740 aa	Known RBP	5.09	□□□□□ -1.6
MDR1	YGR100W	CSE1	P33307	960 aa		5.09	□□□□□ -1.6
MDR1	YGR100W	BTN2	P53286	410 aa		5.09	□□□□□ -1.6
MDR1	YGR100W	RUD3	Q12234	484 aa	Known RBP	5.09	□□□□□ -1.6
MDR1	YGR100W	SMC6	Q12749	1114 aa		5.09	□□□□□ -1.6
MDR1	YGR100W	KRS1	P15180	591 aa	Known RBP	5.08	□□□□□ -1.6
MDR1	YGR100W	FRS2	P15625	503 aa	Known RBP	5.08	□□□□□ -1.6
MDR1	YGR100W	CDC48	P25694	835 aa	Known RBP	5.08	□□□□□ -1.6
MDR1	YGR100W	TTI1	P36097	1038 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	PCH2	P38126	564 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	SPT8	P38915	602 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	DSL1	P53847	754 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	REX2	P54964	269 aa	Known RBP	5.08	□□□□□ -1.6
MDR1	YGR100W	ADE12	P80210	433 aa	Known RBP	5.08	□□□□□ -1.6
MDR1	YGR100W	MLP1	Q02455	1875 aa	Known RBP	5.08	□□□□□ -1.6
MDR1	YGR100W	SWI6	P09959	803 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	VPS35	P34110	944 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	EFM2	P38347	419 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	ATG3	P40344	310 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	GDE1	Q02979	1223 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	LAM6	Q08001	693 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	SLX4	Q12098	748 aa		5.08	□□□□□ -1.6
MDR1	YGR100W	PRP16	P15938	1071 aa	Predicted RBP	5.07	□□□□□ -1.6
MDR1	YGR100W	MBR1	P23493	339 aa		5.07	□□□□□ -1.6
MDR1	YGR100W	PET112	P33893	541 aa		5.07	□□□□□ -1.6
MDR1	YGR100W	HYR1	P40581	163 aa	Known RBP	5.07	□□□□□ -1.6
MDR1	YGR100W	JIP3	O13555	125 aa		5.07	□□□□□ -1.6
MDR1	YGR100W	HCA4	P20448	770 aa	Known RBP	5.07	□□□□□ -1.6
MDR1	YGR100W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
MDR1	YGR100W	ECM4	P36156	370 aa		5.07	□□□□□ -1.6
MDR1	YGR100W	REI1	P38344	393 aa	Predicted RBP	5.07	□□□□□ -1.6
MDR1	YGR100W	DMA1	P38823	416 aa		5.07	□□□□□ -1.6
MDR1	YGR100W	SHC1	P39000	512 aa		5.07	□□□□□ -1.6
MDR1	YGR100W	CCT5	P40413	562 aa	Known RBP	5.07	□□□□□ -1.6
MDR1	YGR100W	HEH2	Q03281	663 aa		5.07	□□□□□ -1.6
MDR1	YGR100W	RNR2	P09938	399 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	UGA3	P26370	528 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	SIP3	P38717	1229 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	CIC1	P38779	376 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	GGA2	P38817	585 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	SEC27	P41811	889 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	SDA1	P53313	767 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	HEF3	P53978	1044 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	SYH1	Q02875	849 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	STE20	Q03497	939 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	PLP1	Q04004	230 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	YMR111C	Q04461	462 aa	Predicted RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	MRD1	Q06106	887 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	MMR1	Q06324	491 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	PSK2	Q08217	1101 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	YOR223W	Q12015	292 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	APC2	Q12440	853 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	SWC3	P31376	625 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	ACP1	P32463	125 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	CCM1	P48237	864 aa	Predicted RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	BRE1	Q07457	700 aa	Known RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	MCM16	Q12262	181 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	BRR1	Q99177	341 aa	Predicted RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	SNT2	P53127	1403 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	ARD1	P07347	238 aa	Predicted RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	RRP43	P25359	394 aa	Predicted RBP	5.06	□□□□□ -1.6
MDR1	YGR100W	YKR018C	P36114	725 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	BRL1	P38770	471 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	FYV10	P40492	516 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	AIM21	P40563	679 aa		5.06	□□□□□ -1.6
MDR1	YGR100W	MET7	Q08645	548 aa		5.06	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms