RNA–Protein interactions for RNA: YGL145W

TIP20, Transcript of Peripheral membrane protein required for COPI vesicle fusion to the ER, yeast

Gene TIP20, Length 2,106 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIP20	YGL145W	ULI1	P43604	169 aa		6.29	□□□□□ -1.4
TIP20	YGL145W	TPO2	P53283	614 aa		6.29	□□□□□ -1.4
TIP20	YGL145W	VPS72	Q03388	795 aa		6.28	□□□□□ -1.4
TIP20	YGL145W	IOC2	Q12072	812 aa		6.28	□□□□□ -1.4
TIP20	YGL145W	RAD4	P14736	754 aa		6.28	□□□□□ -1.4
TIP20	YGL145W	PRI2	P20457	528 aa		6.28	□□□□□ -1.4
TIP20	YGL145W	YNL035C	P53962	389 aa	Known RBP	6.28	□□□□□ -1.4
TIP20	YGL145W	NOC3	Q07896	663 aa	Predicted RBP	6.28	□□□□□ -1.4
TIP20	YGL145W	MRPL33	P20084	86 aa		6.27	□□□□□ -1.41
TIP20	YGL145W	YHR020W	P38708	688 aa	Known RBP	6.27	□□□□□ -1.41
TIP20	YGL145W	UBP12	P39538	1254 aa		6.27	□□□□□ -1.41
TIP20	YGL145W	HAP5	Q02516	242 aa		6.27	□□□□□ -1.41
TIP20	YGL145W	PMC1	P38929	1173 aa	Predicted RBP	6.26	□□□□□ -1.41
TIP20	YGL145W	TPM2	P40414	161 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	RSC4	Q02206	625 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	URN1	Q06525	465 aa	Known RBP	6.26	□□□□□ -1.41
TIP20	YGL145W	MOD5	P07884	428 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	CDC34	P14682	295 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	DUT1	P33317	147 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	YKL069W	P36088	180 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	CIC1	P38779	376 aa	Known RBP	6.26	□□□□□ -1.41
TIP20	YGL145W	YGL081W	P53156	320 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	YGR053C	P53234	283 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	BSC2	Q05611	235 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	YBL029C-A	Q3E756	94 aa		6.26	□□□□□ -1.41
TIP20	YGL145W	SPF1	P39986	1215 aa	Known RBP	6.25	□□□□□ -1.41
TIP20	YGL145W	VNX1	P42839	908 aa		6.25	□□□□□ -1.41
TIP20	YGL145W	YDR344C	Q05510	147 aa		6.25	□□□□□ -1.41
TIP20	YGL145W	YHL008C	P38750	627 aa		6.25	□□□□□ -1.41
TIP20	YGL145W	TIM54	P47045	478 aa		6.25	□□□□□ -1.41
TIP20	YGL145W	OPI10	Q08202	246 aa		6.25	□□□□□ -1.41
TIP20	YGL145W	PHO8	P11491	566 aa		6.24	□□□□□ -1.41
TIP20	YGL145W	PRE9	P23638	258 aa	Known RBP	6.24	□□□□□ -1.41
TIP20	YGL145W	TIF11	P38912	153 aa	Known RBP	6.24	□□□□□ -1.41
TIP20	YGL145W	YEN1	P40028	759 aa		6.24	□□□□□ -1.41
TIP20	YGL145W	DAL4	Q04895	635 aa		6.24	□□□□□ -1.41
TIP20	YGL145W	TDA5	Q06417	326 aa	Known RBP	6.24	□□□□□ -1.41
TIP20	YGL145W	UTR2	P32623	467 aa		6.23	□□□□□ -1.41
TIP20	YGL145W	MSH4	P40965	878 aa	Predicted RBP	6.23	□□□□□ -1.41
TIP20	YGL145W	APP1	P53933	587 aa		6.23	□□□□□ -1.41
TIP20	YGL145W	ISU1	Q03020	165 aa		6.23	□□□□□ -1.41
TIP20	YGL145W	UTP14	Q04500	899 aa	Known RBP	6.23	□□□□□ -1.41
TIP20	YGL145W	YPR015C	Q12531	247 aa		6.23	□□□□□ -1.41
TIP20	YGL145W	PRT1	P06103	763 aa	Known RBP	6.23	□□□□□ -1.41
TIP20	YGL145W	HXT8	P40886	569 aa		6.23	□□□□□ -1.41
TIP20	YGL145W	TYW3	P53177	273 aa		6.23	□□□□□ -1.41
TIP20	YGL145W	NAN1	Q02931	896 aa	Known RBP	6.23	□□□□□ -1.41
TIP20	YGL145W	INP54	Q08227	384 aa	Known RBP	6.23	□□□□□ -1.41
TIP20	YGL145W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.22	□□□□□ -1.41	not detected
TIP20	YGL145W	EMW1	P42842	904 aa	Known RBP	6.22	□□□□□ -1.41
TIP20	YGL145W	MRPS18	P42847	217 aa		6.22	□□□□□ -1.41
TIP20	YGL145W	UGA4	P32837	571 aa		6.22	□□□□□ -1.41
TIP20	YGL145W	SMC1	P32908	1225 aa		6.22	□□□□□ -1.41
TIP20	YGL145W	ENP1	P38333	483 aa	Known RBP	6.22	□□□□□ -1.41
TIP20	YGL145W	DNM1	P54861	757 aa		6.22	□□□□□ -1.41
TIP20	YGL145W	YPQ2	Q06328	317 aa		6.22	□□□□□ -1.41
TIP20	YGL145W	FLC1	Q08967	793 aa		6.22	□□□□□ -1.41
TIP20	YGL145W	MCD1	Q12158	566 aa		6.22	□□□□□ -1.41
TIP20	YGL145W	VMA3	P25515	160 aa		6.21	□□□□□ -1.42
TIP20	YGL145W	CHZ1	P40019	153 aa	Predicted RBP	6.21	□□□□□ -1.42
TIP20	YGL145W	YRB30	P53107	440 aa	Predicted RBP	6.21	□□□□□ -1.42
TIP20	YGL145W	YLR125W	Q12138	136 aa		6.21	□□□□□ -1.42
TIP20	YGL145W	PAT1	P25644	796 aa	Known RBP	6.2	□□□□□ -1.42
TIP20	YGL145W	SEC61	P32915	480 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	ARH1	P48360	493 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	CCP1	P00431	361 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	ERR1	P0CX10	437 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	ERR2	P0CX11	437 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	KIP2	P28743	706 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	FBP26	P32604	452 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	RTG1	P32607	177 aa		6.2	□□□□□ -1.42
TIP20	YGL145W	PRP40	P33203	583 aa	Known RBP	6.19	□□□□□ -1.42
TIP20	YGL145W	RSP5	P39940	809 aa	Known RBP	6.19	□□□□□ -1.42
TIP20	YGL145W	RGD2	P43556	714 aa		6.19	□□□□□ -1.42
TIP20	YGL145W	DAT1	P13483	248 aa	Known RBP	6.19	□□□□□ -1.42
TIP20	YGL145W	SRM1	P21827	482 aa		6.19	□□□□□ -1.42
TIP20	YGL145W	THI4	P32318	326 aa		6.19	□□□□□ -1.42
TIP20	YGL145W	STE5	P32917	917 aa		6.19	□□□□□ -1.42
TIP20	YGL145W	CRP1	P38845	465 aa	Known RBP	6.19	□□□□□ -1.42
TIP20	YGL145W	BNI4	P53858	892 aa		6.19	□□□□□ -1.42
TIP20	YGL145W	YCS4	Q06156	1176 aa		6.19	□□□□□ -1.42
TIP20	YGL145W	SCD5	P34758	872 aa		6.18	□□□□□ -1.42
TIP20	YGL145W	RAD55	P38953	406 aa		6.18	□□□□□ -1.42
TIP20	YGL145W	YPL109C	Q02981	657 aa		6.18	□□□□□ -1.42
TIP20	YGL145W	YDL129W	Q07555	291 aa		6.18	□□□□□ -1.42
TIP20	YGL145W	GCR1	P07261	785 aa		6.17	□□□□□ -1.42
TIP20	YGL145W	MCM1	P11746	286 aa		6.17	□□□□□ -1.42
TIP20	YGL145W	MCM5	P29496	775 aa	Known RBP	6.17	□□□□□ -1.42
TIP20	YGL145W	PIC2	P40035	300 aa		6.17	□□□□□ -1.42
TIP20	YGL145W	TIF6	Q12522	245 aa	Known RBP	6.17	□□□□□ -1.42
TIP20	YGL145W	NOP14	Q99207	810 aa	Known RBP	6.17	□□□□□ -1.42
TIP20	YGL145W	SPT16	P32558	1035 aa	Known RBP	6.17	□□□□□ -1.42
TIP20	YGL145W	NTA1	P40354	457 aa		6.17	□□□□□ -1.42
TIP20	YGL145W	YJR115W	P47152	169 aa		6.17	□□□□□ -1.42
TIP20	YGL145W	ZDS1	P50111	915 aa	Known RBP	6.17	□□□□□ -1.42
TIP20	YGL145W	FOL1	P53848	824 aa		6.17	□□□□□ -1.42
TIP20	YGL145W	SPP1	Q03012	353 aa		6.17	□□□□□ -1.42
TIP20	YGL145W	FAL1	Q12099	399 aa	Known RBP	6.17	□□□□□ -1.42
TIP20	YGL145W	GRX7	P38068	203 aa		6.16	□□□□□ -1.42
TIP20	YGL145W	TBS1	P38114	1094 aa		6.16	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms