RNA–Protein interactions for RNA: YGL044C

RNA15, Transcript of Component of the cleavage and polyadenylation factor I (CF I), yeast

Gene RNA15, Length 891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RNA15	YGL044C	SSK2	P53599	1579 aa		6.69	□□□□□ -1.34
RNA15	YGL044C	NGR1	P32831	672 aa	Known RBP	6.69	□□□□□ -1.34
RNA15	YGL044C	SIS2	P36024	562 aa		6.69	□□□□□ -1.34
RNA15	YGL044C	ECM23	Q02710	187 aa		6.69	□□□□□ -1.34
RNA15	YGL044C	KNS1	P32350	737 aa	Predicted RBP	6.68	□□□□□ -1.34
RNA15	YGL044C	BOI2	P39969	1040 aa		6.67	□□□□□ -1.34
RNA15	YGL044C	YMR187C	Q03236	431 aa		6.67	□□□□□ -1.34
RNA15	YGL044C	YCK2	P23292	546 aa	Known RBP	6.66	□□□□□ -1.34
RNA15	YGL044C	CPS1	P27614	576 aa		6.66	□□□□□ -1.34
RNA15	YGL044C	SKN7	P38889	622 aa		6.66	□□□□□ -1.34
RNA15	YGL044C	YTA7	P40340	1379 aa		6.66	□□□□□ -1.34
RNA15	YGL044C	MYO2	P19524	1574 aa	Known RBP	6.65	□□□□□ -1.34
RNA15	YGL044C	SUV3	P32580	737 aa		6.65	□□□□□ -1.34
RNA15	YGL044C	MCX1	P38323	520 aa	Predicted RBP	6.65	□□□□□ -1.34
RNA15	YGL044C	UTP4	Q06679	776 aa	Known RBP	6.65	□□□□□ -1.34
RNA15	YGL044C	CHD1	P32657	1468 aa		6.65	□□□□□ -1.35
RNA15	YGL044C	SCD5	P34758	872 aa		6.64	□□□□□ -1.35
RNA15	YGL044C	SKI3	P17883	1432 aa	Known RBP	6.63	□□□□□ -1.35
RNA15	YGL044C	VAN1	P23642	535 aa		6.63	□□□□□ -1.35
RNA15	YGL044C	KAP122	P32767	1081 aa		6.63	□□□□□ -1.35
RNA15	YGL044C	UBX7	P38349	436 aa		6.63	□□□□□ -1.35
RNA15	YGL044C	SLN1	P39928	1220 aa	Predicted RBP	6.63	□□□□□ -1.35
RNA15	YGL044C	SKP1	P52286	194 aa		6.63	□□□□□ -1.35
RNA15	YGL044C	YNR040W	P53736	256 aa		6.63	□□□□□ -1.35
RNA15	YGL044C	CUS1	Q02554	436 aa	Predicted RBP	6.63	□□□□□ -1.35
RNA15	YGL044C	ESP1	Q03018	1630 aa		6.62	□□□□□ -1.35
RNA15	YGL044C	PRK1	P40494	810 aa		6.62	□□□□□ -1.35
RNA15	YGL044C	CAB1	Q04430	367 aa		6.62	□□□□□ -1.35
RNA15	YGL044C	YDR215C	Q12240	137 aa		6.62	□□□□□ -1.35
RNA15	YGL044C	YPK9	Q12697	1472 aa		6.61	□□□□□ -1.35
RNA15	YGL044C	PUP1	P25043	261 aa		6.61	□□□□□ -1.35
RNA15	YGL044C	QDR2	P40474	542 aa		6.61	□□□□□ -1.35
RNA15	YGL044C	POL1	P13382	1468 aa		6.6	□□□□□ -1.35
RNA15	YGL044C	RPP1A	P05318	106 aa	Predicted RBP	6.6	□□□□□ -1.35
RNA15	YGL044C	RPC31	P17890	251 aa		6.6	□□□□□ -1.35
RNA15	YGL044C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
RNA15	YGL044C	MET1	P36150	593 aa		6.6	□□□□□ -1.35
RNA15	YGL044C	HEH2	Q03281	663 aa		6.59	□□□□□ -1.35
RNA15	YGL044C	TAF7	Q05021	590 aa		6.59	□□□□□ -1.35
RNA15	YGL044C	MCA1	Q08601	432 aa		6.59	□□□□□ -1.35
RNA15	YGL044C	NCL1	P38205	684 aa	Known RBP	6.58	□□□□□ -1.36
RNA15	YGL044C	FOX2	Q02207	900 aa	Known RBP	6.58	□□□□□ -1.36
RNA15	YGL044C	ATG2	P53855	1592 aa		6.57	□□□□□ -1.36
RNA15	YGL044C	MRP10	O75012	95 aa		6.57	□□□□□ -1.36
RNA15	YGL044C	APM2	P38700	605 aa		6.57	□□□□□ -1.36
RNA15	YGL044C	PRY1	P47032	299 aa		6.57	□□□□□ -1.36
RNA15	YGL044C	TRS33	Q99394	268 aa		6.57	□□□□□ -1.36
RNA15	YGL044C	PGM2	P37012	569 aa	Known RBP	6.56	□□□□□ -1.36
RNA15	YGL044C	YBR197C	P38306	217 aa		6.56	□□□□□ -1.36
RNA15	YGL044C	YML083C	Q04526	418 aa		6.56	□□□□□ -1.36
RNA15	YGL044C	MRPL33	P20084	86 aa		6.55	□□□□□ -1.36
RNA15	YGL044C	VMA3	P25515	160 aa		6.55	□□□□□ -1.36
RNA15	YGL044C	CWH41	P53008	833 aa		6.55	□□□□□ -1.36
RNA15	YGL044C	MMS22	Q06164	1454 aa		6.54	□□□□□ -1.36
RNA15	YGL044C	PEP1	P32319	1579 aa		6.54	□□□□□ -1.36
RNA15	YGL044C	NAR1	P23503	491 aa	Known RBP	6.54	□□□□□ -1.36
RNA15	YGL044C	ALG14	P38242	237 aa		6.54	□□□□□ -1.36
RNA15	YGL044C	AMN1	P38285	549 aa	Predicted RBP	6.54	□□□□□ -1.36
RNA15	YGL044C	ITC1	P53125	1264 aa		6.54	□□□□□ -1.36
RNA15	YGL044C	STU1	P38198	1513 aa		6.54	□□□□□ -1.36
RNA15	YGL044C	ALD4	P46367	519 aa	Known RBP	6.53	□□□□□ -1.36
RNA15	YGL044C	RPO31	P04051	1460 aa		6.53	□□□□□ -1.36
RNA15	YGL044C	MDS3	P53094	1487 aa		6.53	□□□□□ -1.36
RNA15	YGL044C	BSD2	P38356	321 aa		6.52	□□□□□ -1.37
RNA15	YGL044C	NHA1	Q99271	985 aa		6.52	□□□□□ -1.37
RNA15	YGL044C	IDI1	P15496	288 aa		6.51	□□□□□ -1.37
RNA15	YGL044C	ISC10	P32645	267 aa		6.51	□□□□□ -1.37
RNA15	YGL044C	TAT1	P38085	619 aa		6.51	□□□□□ -1.37
RNA15	YGL044C	GIS4	Q04233	774 aa		6.51	□□□□□ -1.37
RNA15	YGL044C	NOB1	Q08444	459 aa	Known RBP	6.51	□□□□□ -1.37
RNA15	YGL044C	TOP2	P06786	1428 aa	Known RBP	6.5	□□□□□ -1.37
RNA15	YGL044C	SCC2	Q04002	1493 aa		6.5	□□□□□ -1.37
RNA15	YGL044C	SBP1	P10080	294 aa	Known RBP	6.5	□□□□□ -1.37
RNA15	YGL044C	PUN1	Q06991	263 aa		6.5	□□□□□ -1.37
RNA15	YGL044C	SMC4	Q12267	1418 aa		6.5	□□□□□ -1.37
RNA15	YGL044C	GLT1	Q12680	2145 aa	Known RBP	6.49	□□□□□ -1.37
RNA15	YGL044C	YOR1	P53049	1477 aa		6.49	□□□□□ -1.37
RNA15	YGL044C	TPS3	P38426	1054 aa	Known RBP	6.49	□□□□□ -1.37
RNA15	YGL044C	LSB6	P42951	607 aa		6.49	□□□□□ -1.37
RNA15	YGL044C	BUD9	P53226	547 aa		6.49	□□□□□ -1.37
RNA15	YGL044C	YOR296W	Q08748	1289 aa		6.49	□□□□□ -1.37
RNA15	YGL044C	MYO4	P32492	1471 aa		6.48	□□□□□ -1.37
RNA15	YGL044C	GAS5	Q08193	484 aa		6.48	□□□□□ -1.37
RNA15	YGL044C	DYS1	P38791	387 aa		6.47	□□□□□ -1.37
RNA15	YGL044C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.47	□□□□□ -1.37	not detected
RNA15	YGL044C	PUF6	Q04373	656 aa	Known RBP	6.47	□□□□□ -1.37
RNA15	YGL044C	UFD4	P33202	1483 aa		6.47	□□□□□ -1.37
RNA15	YGL044C	LDH1	P38139	375 aa		6.46	□□□□□ -1.38
RNA15	YGL044C	GIP1	P38229	639 aa		6.46	□□□□□ -1.38
RNA15	YGL044C	YER156C	P40093	338 aa	Known RBP	6.46	□□□□□ -1.38
RNA15	YGL044C	CWC15	Q03772	175 aa	Known RBP	6.46	□□□□□ -1.38
RNA15	YGL044C	RKR1	Q04781	1562 aa		6.46	□□□□□ -1.38
RNA15	YGL044C	SSA4	P22202	642 aa	Known RBP	6.45	□□□□□ -1.38
RNA15	YGL044C	YPL034W	Q03083	165 aa		6.45	□□□□□ -1.38
RNA15	YGL044C	SRS2	P12954	1174 aa		6.44	□□□□□ -1.38
RNA15	YGL044C	MSN1	P22148	382 aa		6.44	□□□□□ -1.38
RNA15	YGL044C	RRM3	P38766	723 aa		6.44	□□□□□ -1.38
RNA15	YGL044C	YCF1	P39109	1515 aa	Known RBP	6.42	□□□□□ -1.38
RNA15	YGL044C	KTR2	P33550	425 aa		6.42	□□□□□ -1.38
RNA15	YGL044C	ISW1	P38144	1129 aa		6.42	□□□□□ -1.38

Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms