RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W NUG1P40010 520 aaKnown RBP6.47□□□□□ -1.37
UBP9YER098W VPS35P34110 944 aa6.46□□□□□ -1.37
UBP9YER098W BUD6P41697 788 aa6.46□□□□□ -1.37
UBP9YER098W CDC55Q00362 526 aa6.46□□□□□ -1.37
UBP9YER098W YDR344CQ05510 147 aa6.46□□□□□ -1.37
UBP9YER098W TOS4Q06266 489 aa6.46□□□□□ -1.37
UBP9YER098W BDF2Q07442 638 aa6.46□□□□□ -1.37
UBP9YER098W SEC3P33332 1336 aaKnown RBP6.46□□□□□ -1.38
UBP9YER098W IME2P32581 645 aa6.46□□□□□ -1.38
UBP9YER098W YDL129WQ07555 291 aa6.46□□□□□ -1.38
UBP9YER098W ARH1P48360 493 aa6.45□□□□□ -1.38
UBP9YER098W SAM37P50110 327 aa6.45□□□□□ -1.38
UBP9YER098W YNL011CP53980 444 aa6.45□□□□□ -1.38
UBP9YER098W UBX5Q06682 500 aa6.45□□□□□ -1.38
UBP9YER098W OXR1Q08952 273 aa6.45□□□□□ -1.38
UBP9YER098W LDB19Q12502 818 aa6.45□□□□□ -1.38
UBP9YER098W CFT1Q06632 1357 aaKnown RBP6.45□□□□□ -1.38
UBP9YER098W UTR2P32623 467 aa6.45□□□□□ -1.38
UBP9YER098W TOM20P35180 183 aa6.45□□□□□ -1.38
UBP9YER098W MNR2P35724 969 aa6.45□□□□□ -1.38
UBP9YER098W TFG1P41895 735 aaPredicted RBP6.45□□□□□ -1.38
UBP9YER098W APP1P53933 587 aa6.45□□□□□ -1.38
UBP9YER098W YOR131CQ12486 218 aa6.45□□□□□ -1.38
UBP9YER098W YPR015CQ12531 247 aa6.45□□□□□ -1.38
UBP9YER098W TCB2P48231 1178 aa6.44□□□□□ -1.38
UBP9YER098W HSL1P34244 1518 aa6.44□□□□□ -1.38
UBP9YER098W MNN4P36044 1178 aa6.43□□□□□ -1.38
UBP9YER098W BNI4P53858 892 aa6.43□□□□□ -1.38
UBP9YER098W POB3Q04636 552 aaKnown RBP6.43□□□□□ -1.38
UBP9YER098W ECM5Q03214 1411 aa6.43□□□□□ -1.38
UBP9YER098W TAF2P23255 1407 aa6.43□□□□□ -1.38
UBP9YER098W RAD2P07276 1031 aa6.43□□□□□ -1.38
UBP9YER098W MOD5P07884 428 aa6.43□□□□□ -1.38
UBP9YER098W FAA3P39002 694 aa6.43□□□□□ -1.38
UBP9YER098W MRPL33P20084 86 aa6.42□□□□□ -1.38
UBP9YER098W SPT16P32558 1035 aaKnown RBP6.42□□□□□ -1.38
UBP9YER098W HXT5P38695 592 aa6.42□□□□□ -1.38
UBP9YER098W CIC1P38779 376 aaKnown RBP6.42□□□□□ -1.38
UBP9YER098W NOC3Q07896 663 aaPredicted RBP6.42□□□□□ -1.38
UBP9YER098W GRX1P25373 110 aaKnown RBP6.41□□□□□ -1.38
UBP9YER098W KIP2P28743 706 aa6.41□□□□□ -1.38
UBP9YER098W TAT2P38967 592 aa6.41□□□□□ -1.38
UBP9YER098W ISU1Q03020 165 aa6.41□□□□□ -1.38
UBP9YER098W SPT6P23615 1451 aaKnown RBP6.41□□□□□ -1.38
UBP9YER098W HXK1P04806 485 aaKnown RBP6.41□□□□□ -1.38
UBP9YER098W DAT1P13483 248 aaKnown RBP6.41□□□□□ -1.38
UBP9YER098W HUL5P53119 910 aa6.41□□□□□ -1.38
UBP9YER098W STU1P38198 1513 aa6.4□□□□□ -1.38
UBP9YER098W EMW1P42842 904 aaKnown RBP6.4□□□□□ -1.38
UBP9YER098W GDE1Q02979 1223 aa6.4□□□□□ -1.38
UBP9YER098W BSC2Q05611 235 aa6.4□□□□□ -1.38
UBP9YER098W PDR10P51533 1564 aa6.4□□□□□ -1.39
UBP9YER098W FUN12P39730 1002 aaKnown RBP6.39□□□□□ -1.39
UBP9YER098W BPT1P14772 1559 aa6.39□□□□□ -1.39
UBP9YER098W TBS1P38114 1094 aa6.39□□□□□ -1.39
UBP9YER098W MNN1P39106 762 aa6.39□□□□□ -1.39
UBP9YER098W FAA4P47912 694 aaKnown RBP6.39□□□□□ -1.39
UBP9YER098W NCR1Q12200 1170 aa6.39□□□□□ -1.39
UBP9YER098W MET6P05694 767 aaKnown RBP6.38□□□□□ -1.39
UBP9YER098W PRI2P20457 528 aa6.38□□□□□ -1.39
UBP9YER098W FBP26P32604 452 aa6.38□□□□□ -1.39
UBP9YER098W YHL008CP38750 627 aa6.38□□□□□ -1.39
UBP9YER098W PTC2P39966 464 aaKnown RBP6.38□□□□□ -1.39
UBP9YER098W HXT8P40886 569 aa6.38□□□□□ -1.39
UBP9YER098W TY1B-DR4Q07793 1604 aa6.38□□□□□ -1.39
UBP9YER098W SSB1P11484 613 aaKnown RBP6.38□□□□□ -1.39
UBP9YER098W SMC1P32908 1225 aa6.38□□□□□ -1.39
UBP9YER098W OPY1P38271 328 aa6.38□□□□□ -1.39
UBP9YER098W SSB2P40150 613 aaKnown RBP6.38□□□□□ -1.39
UBP9YER098W YGR161W-CQ3E744 92 aa6.38□□□□□ -1.39
UBP9YER098W SCC2Q04002 1493 aa6.38□□□□□ -1.39
UBP9YER098W YJR142WP47173 342 aa6.37□□□□□ -1.39
UBP9YER098W RSC4Q02206 625 aa6.37□□□□□ -1.39
UBP9YER098W DAL4Q04895 635 aa6.37□□□□□ -1.39
UBP9YER098W HIR3P47171 1648 aa6.37□□□□□ -1.39
UBP9YER098W RAD4P14736 754 aa6.37□□□□□ -1.39
UBP9YER098W RPC31P17890 251 aa6.37□□□□□ -1.39
UBP9YER098W GRX4P32642 244 aa6.37□□□□□ -1.39
UBP9YER098W SAP30P38429 201 aa6.37□□□□□ -1.39
UBP9YER098W NUP82P40368 713 aa6.37□□□□□ -1.39
UBP9YER098W THO2P53552 1597 aaKnown RBP6.37□□□□□ -1.39
UBP9YER098W REV3P14284 1504 aa6.36□□□□□ -1.39
UBP9YER098W VMA3P25515 160 aa6.36□□□□□ -1.39
UBP9YER098W MKS1P34072 584 aa6.36□□□□□ -1.39
UBP9YER098W YPQ2Q06328 317 aa6.36□□□□□ -1.39
UBP9YER098W INP54Q08227 384 aaKnown RBP6.36□□□□□ -1.39
UBP9YER098W BUD4P47136 1447 aa6.36□□□□□ -1.39
UBP9YER098W PRE9P23638 258 aaKnown RBP6.36□□□□□ -1.39
UBP9YER098W SCD5P34758 872 aa6.36□□□□□ -1.39
UBP9YER098W MRPS18P42847 217 aa6.36□□□□□ -1.39
UBP9YER098W EAF7P53911 425 aaKnown RBP6.36□□□□□ -1.39
UBP9YER098W TDA5Q06417 326 aaKnown RBP6.36□□□□□ -1.39
UBP9YER098W WTM2Q12206 467 aa6.36□□□□□ -1.39
UBP9YER098W CDC34P14682 295 aa6.35□□□□□ -1.39
UBP9YER098W TIM23P32897 222 aa6.35□□□□□ -1.39
UBP9YER098W TIM54P47045 478 aa6.35□□□□□ -1.39
UBP9YER098W PPM2Q08282 695 aa6.35□□□□□ -1.39
UBP9YER098W SWE1P32944 819 aa6.34□□□□□ -1.39
UBP9YER098W SPT23P35210 1082 aa6.34□□□□□ -1.39
UBP9YER098W RAD55P38953 406 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms