RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W PIN2Q12057 282 aa3.94□□□□□ -1.78
SIZ1YDR409W YRF1-4O13559 1382 aa3.94□□□□□ -1.78
SIZ1YDR409W YML133CQ03099 1374 aa3.94□□□□□ -1.78
SIZ1YDR409W YLL067CQ07888 1374 aa3.94□□□□□ -1.78
SIZ1YDR409W YLL066CQ99208 1374 aa3.94□□□□□ -1.78
SIZ1YDR409W ALD6P54115 500 aaKnown RBP3.93□□□□□ -1.78
SIZ1YDR409W CTR9P89105 1077 aa3.93□□□□□ -1.78
SIZ1YDR409W QCR6P00127 147 aa3.93□□□□□ -1.78
SIZ1YDR409W YIL092WP40497 633 aa3.93□□□□□ -1.78
SIZ1YDR409W TEA1P47988 759 aa3.93□□□□□ -1.78
SIZ1YDR409W PEX8P53248 589 aa3.93□□□□□ -1.78
SIZ1YDR409W YOR378WQ08902 515 aa3.93□□□□□ -1.78
SIZ1YDR409W KRE5P22023 1365 aa3.93□□□□□ -1.78
SIZ1YDR409W SAP155P43612 1002 aa3.93□□□□□ -1.78
SIZ1YDR409W TY4A-JP47023 414 aa3.93□□□□□ -1.78
SIZ1YDR409W RRP46P53256 223 aaPredicted RBP3.93□□□□□ -1.78
SIZ1YDR409W HST2P53686 357 aa3.93□□□□□ -1.78
SIZ1YDR409W PUF6Q04373 656 aaKnown RBP3.93□□□□□ -1.78
SIZ1YDR409W HIF1Q12373 385 aa3.93□□□□□ -1.78
SIZ1YDR409W SEC6P32844 805 aa3.92□□□□□ -1.78
SIZ1YDR409W ARL1P38116 183 aaKnown RBP3.92□□□□□ -1.78
SIZ1YDR409W BUD27P43573 796 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
SIZ1YDR409W FPK1P53739 893 aa3.92□□□□□ -1.78
SIZ1YDR409W SIR4P11978 1358 aa3.92□□□□□ -1.78
SIZ1YDR409W SEC20P28791 383 aa3.92□□□□□ -1.78
SIZ1YDR409W YAP3P38749 330 aa3.92□□□□□ -1.78
SIZ1YDR409W SNU66Q12420 587 aaPredicted RBP3.92□□□□□ -1.78
SIZ1YDR409W ITC1P53125 1264 aa3.91□□□□□ -1.78
SIZ1YDR409W BCK1Q01389 1478 aa3.91□□□□□ -1.78
SIZ1YDR409W SIT4P20604 311 aa3.91□□□□□ -1.78
SIZ1YDR409W SUV3P32580 737 aa3.91□□□□□ -1.78
SIZ1YDR409W CSE4P36012 229 aa3.91□□□□□ -1.78
SIZ1YDR409W YBL036CP38197 257 aa3.91□□□□□ -1.78
SIZ1YDR409W JIP5Q06214 492 aaPredicted RBP3.91□□□□□ -1.78
SIZ1YDR409W ESS1P22696 170 aa3.9□□□□□ -1.78
SIZ1YDR409W NAB3P38996 802 aaKnown RBP RIP-Chip data3.9□□□□□ -1.78not detected
SIZ1YDR409W BBC1P47068 1157 aa3.9□□□□□ -1.78
SIZ1YDR409W HEF3P53978 1044 aaKnown RBP3.9□□□□□ -1.78
SIZ1YDR409W PHO4P07270 312 aaKnown RBP3.9□□□□□ -1.79
SIZ1YDR409W MCM2P29469 868 aa3.9□□□□□ -1.79
SIZ1YDR409W APL6P46682 809 aa3.9□□□□□ -1.79
SIZ1YDR409W ROM1P53046 1155 aa3.9□□□□□ -1.79
SIZ1YDR409W ECM23Q02710 187 aa3.9□□□□□ -1.79
SIZ1YDR409W NOP58Q12499 511 aaKnown RBP3.9□□□□□ -1.79
SIZ1YDR409W MVP1P40959 511 aaKnown RBP3.89□□□□□ -1.79
SIZ1YDR409W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SIZ1YDR409W HAP5Q02516 242 aa3.89□□□□□ -1.79
SIZ1YDR409W THI22Q06490 572 aa3.89□□□□□ -1.79
SIZ1YDR409W THS1P04801 734 aaKnown RBP3.89□□□□□ -1.79
SIZ1YDR409W MPH2P0CD99 609 aa3.89□□□□□ -1.79
SIZ1YDR409W MPH3P0CE00 602 aa3.89□□□□□ -1.79
SIZ1YDR409W DUT1P33317 147 aa3.89□□□□□ -1.79
SIZ1YDR409W ILV3P39522 585 aaKnown RBP3.89□□□□□ -1.79
SIZ1YDR409W RTR1P40084 226 aaPredicted RBP3.89□□□□□ -1.79
SIZ1YDR409W FOL1P53848 824 aa3.89□□□□□ -1.79
SIZ1YDR409W NKP1Q12493 238 aa3.89□□□□□ -1.79
SIZ1YDR409W VPS5Q92331 675 aa3.89□□□□□ -1.79
SIZ1YDR409W TY1B-NL2Q99337 1749 aaKnown RBP3.89□□□□□ -1.79
SIZ1YDR409W PWP2P25635 923 aaKnown RBP3.88□□□□□ -1.79
SIZ1YDR409W EMP47P43555 445 aa3.88□□□□□ -1.79
SIZ1YDR409W PIL1P53252 339 aaKnown RBP3.88□□□□□ -1.79
SIZ1YDR409W YGR130CP53278 816 aa3.88□□□□□ -1.79
SIZ1YDR409W GDE1Q02979 1223 aa3.88□□□□□ -1.79
SIZ1YDR409W ESF1Q06344 628 aaKnown RBP3.88□□□□□ -1.79
SIZ1YDR409W TPD3P31383 635 aa3.88□□□□□ -1.79
SIZ1YDR409W MNN1P39106 762 aa3.88□□□□□ -1.79
SIZ1YDR409W CHZ1P40019 153 aaPredicted RBP3.88□□□□□ -1.79
SIZ1YDR409W TFG1P41895 735 aaPredicted RBP3.88□□□□□ -1.79
SIZ1YDR409W YPP1P46951 817 aa3.88□□□□□ -1.79
SIZ1YDR409W COG4Q06096 861 aa3.88□□□□□ -1.79
SIZ1YDR409W DAK2P43550 591 aa3.87□□□□□ -1.79
SIZ1YDR409W BNA1P47096 177 aa3.87□□□□□ -1.79
SIZ1YDR409W YJR120WP47157 116 aa3.87□□□□□ -1.79
SIZ1YDR409W MAL11P53048 616 aa3.87□□□□□ -1.79
SIZ1YDR409W GPG1P53130 126 aa3.87□□□□□ -1.79
SIZ1YDR409W ECM16Q04217 1267 aaKnown RBP3.87□□□□□ -1.79
SIZ1YDR409W ROM2P51862 1356 aaKnown RBP3.87□□□□□ -1.79
SIZ1YDR409W GAL2P13181 574 aa3.87□□□□□ -1.79
SIZ1YDR409W PRD1P25375 712 aa3.87□□□□□ -1.79
SIZ1YDR409W PPG1P32838 368 aa3.87□□□□□ -1.79
SIZ1YDR409W TIM23P32897 222 aa3.87□□□□□ -1.79
SIZ1YDR409W YKL069WP36088 180 aa3.87□□□□□ -1.79
SIZ1YDR409W YFR006WP43590 535 aa3.87□□□□□ -1.79
SIZ1YDR409W YGR273CP53329 174 aa3.87□□□□□ -1.79
SIZ1YDR409W TAF8Q03750 510 aa3.87□□□□□ -1.79
SIZ1YDR409W TRX2P22803 104 aaKnown RBP3.86□□□□□ -1.79
SIZ1YDR409W GRS1P38088 690 aaKnown RBP3.86□□□□□ -1.79
SIZ1YDR409W PES4P39684 611 aa3.86□□□□□ -1.79
SIZ1YDR409W YEN1P40028 759 aa3.86□□□□□ -1.79
SIZ1YDR409W RRT14P40470 206 aa3.86□□□□□ -1.79
SIZ1YDR409W YMR1P47147 688 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
SIZ1YDR409W YNR029CP53729 429 aaKnown RBP3.86□□□□□ -1.79
SIZ1YDR409W YPR084WQ06821 456 aa3.86□□□□□ -1.79
SIZ1YDR409W DBP1P24784 617 aaKnown RBP3.86□□□□□ -1.79
SIZ1YDR409W MRF1P30775 413 aaPredicted RBP3.86□□□□□ -1.79
SIZ1YDR409W YKL091CP33324 310 aaKnown RBP3.86□□□□□ -1.79
SIZ1YDR409W ERP2P39704 215 aa3.86□□□□□ -1.79
SIZ1YDR409W APP1P53933 587 aa3.86□□□□□ -1.79
SIZ1YDR409W LCD1Q04377 747 aa3.86□□□□□ -1.79
SIZ1YDR409W PSK2Q08217 1101 aa3.86□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms