RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C TY1A-DR3Q12441 440 aa7.77□□□□□ -1.17
LSM6YDR378C PDC6P26263 563 aaKnown RBP7.76□□□□□ -1.17
LSM6YDR378C PSH1Q12161 406 aa7.76□□□□□ -1.17
LSM6YDR378C YBR287WP38355 427 aa7.75□□□□□ -1.17
LSM6YDR378C UBP15P50101 1230 aa7.75□□□□□ -1.17
LSM6YDR378C GLY1P37303 387 aaKnown RBP7.74□□□□□ -1.17
LSM6YDR378C SCW11P53189 542 aa7.74□□□□□ -1.17
LSM6YDR378C LEU1P07264 779 aaKnown RBP7.73□□□□□ -1.17
LSM6YDR378C OSH7P38755 437 aa7.73□□□□□ -1.17
LSM6YDR378C WHI5Q12416 295 aa7.73□□□□□ -1.17
LSM6YDR378C POL32P47110 350 aa7.72□□□□□ -1.17
LSM6YDR378C CDC19P00549 500 aaKnown RBP7.71□□□□□ -1.18
LSM6YDR378C MSN1P22148 382 aa7.71□□□□□ -1.18
LSM6YDR378C SNU71P53207 620 aaKnown RBP7.71□□□□□ -1.18
LSM6YDR378C YNL011CP53980 444 aa7.71□□□□□ -1.18
LSM6YDR378C KTR2P33550 425 aa7.7□□□□□ -1.18
LSM6YDR378C ISW1P38144 1129 aa7.7□□□□□ -1.18
LSM6YDR378C GIP1P38229 639 aa7.7□□□□□ -1.18
LSM6YDR378C RAD55P38953 406 aa7.7□□□□□ -1.18
LSM6YDR378C ALD2P47771 506 aa7.7□□□□□ -1.18
LSM6YDR378C RGP1P16664 663 aa7.69□□□□□ -1.18
LSM6YDR378C MGE1P38523 228 aa7.69□□□□□ -1.18
LSM6YDR378C YOR296WQ08748 1289 aa7.69□□□□□ -1.18
LSM6YDR378C RPC31P17890 251 aa7.68□□□□□ -1.18
LSM6YDR378C MET4P32389 672 aa7.68□□□□□ -1.18
LSM6YDR378C NTA1P40354 457 aa7.68□□□□□ -1.18
LSM6YDR378C YDR444WQ04093 687 aa7.68□□□□□ -1.18
LSM6YDR378C GPI13Q07830 1017 aa7.68□□□□□ -1.18
LSM6YDR378C MNL2Q12205 849 aa7.68□□□□□ -1.18
LSM6YDR378C TY1A-BLQ12266 440 aa7.68□□□□□ -1.18
LSM6YDR378C RPP1AP05318 106 aaPredicted RBP7.67□□□□□ -1.18
LSM6YDR378C MET22P32179 357 aa7.67□□□□□ -1.18
LSM6YDR378C MRPL16P38064 232 aa7.67□□□□□ -1.18
LSM6YDR378C CDC55Q00362 526 aa7.67□□□□□ -1.18
LSM6YDR378C CUS1Q02554 436 aaPredicted RBP7.67□□□□□ -1.18
LSM6YDR378C LCB5Q06147 687 aaKnown RBP7.67□□□□□ -1.18
LSM6YDR378C IRS4P36115 615 aaKnown RBP7.66□□□□□ -1.18
LSM6YDR378C RGD2P43556 714 aa7.66□□□□□ -1.18
LSM6YDR378C SAM37P50110 327 aa7.66□□□□□ -1.18
LSM6YDR378C RSC4Q02206 625 aa7.66□□□□□ -1.18
LSM6YDR378C STB3Q12427 513 aa7.66□□□□□ -1.18
LSM6YDR378C GCD6P32501 712 aaKnown RBP7.65□□□□□ -1.18
LSM6YDR378C BSD2P38356 321 aa7.65□□□□□ -1.18
LSM6YDR378C SKP1P52286 194 aa7.65□□□□□ -1.18
LSM6YDR378C ATE1P16639 503 aa7.64□□□□□ -1.19
LSM6YDR378C APM2P38700 605 aa7.64□□□□□ -1.19
LSM6YDR378C PSY2P40164 858 aa7.64□□□□□ -1.19
LSM6YDR378C NOP7P53261 605 aaKnown RBP7.64□□□□□ -1.19
LSM6YDR378C TIF6Q12522 245 aaKnown RBP7.64□□□□□ -1.19
LSM6YDR378C PHO4P07270 312 aaKnown RBP7.63□□□□□ -1.19
LSM6YDR378C NCL1P38205 684 aaKnown RBP7.63□□□□□ -1.19
LSM6YDR378C AIM46P38885 310 aa7.63□□□□□ -1.19
LSM6YDR378C NAM8Q00539 523 aaKnown RBP7.63□□□□□ -1.19
LSM6YDR378C BSC2Q05611 235 aa7.63□□□□□ -1.19
LSM6YDR378C RRP15Q06511 250 aaPredicted RBP7.63□□□□□ -1.19
LSM6YDR378C NAB2P32505 525 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
LSM6YDR378C NOC3Q07896 663 aaPredicted RBP7.62□□□□□ -1.19
LSM6YDR378C VPS35P34110 944 aa7.61□□□□□ -1.19
LSM6YDR378C CIC1P38779 376 aaKnown RBP7.61□□□□□ -1.19
LSM6YDR378C ROG3P43602 733 aa7.61□□□□□ -1.19
LSM6YDR378C YMR265CQ03508 461 aaKnown RBP7.61□□□□□ -1.19
LSM6YDR378C DIT1P21623 536 aa7.6□□□□□ -1.19
LSM6YDR378C TY1A-MR1Q04215 440 aa7.6□□□□□ -1.19
LSM6YDR378C OXR1Q08952 273 aa7.6□□□□□ -1.19
LSM6YDR378C SEC8P32855 1065 aa7.59□□□□□ -1.19
LSM6YDR378C RPT1P33299 467 aaKnown RBP7.59□□□□□ -1.19
LSM6YDR378C ECM2P38241 364 aaKnown RBP7.59□□□□□ -1.19
LSM6YDR378C YIL165CP40446 119 aa7.59□□□□□ -1.19
LSM6YDR378C ITC1P53125 1264 aa7.59□□□□□ -1.19
LSM6YDR378C EMG1Q06287 252 aaKnown RBP7.59□□□□□ -1.19
LSM6YDR378C YHL008CP38750 627 aa7.58□□□□□ -1.2
LSM6YDR378C DAK2P43550 591 aa7.58□□□□□ -1.2
LSM6YDR378C YNR040WP53736 256 aa7.58□□□□□ -1.2
LSM6YDR378C KRE33P53914 1056 aaKnown RBP7.58□□□□□ -1.2
LSM6YDR378C OYE2Q03558 400 aaKnown RBP7.58□□□□□ -1.2
LSM6YDR378C YJR107WP47145 328 aa7.57□□□□□ -1.2
LSM6YDR378C CUZ1P53899 274 aa7.57□□□□□ -1.2
LSM6YDR378C HEH2Q03281 663 aa7.57□□□□□ -1.2
LSM6YDR378C FPS1P23900 669 aa7.56□□□□□ -1.2
LSM6YDR378C ACO2P39533 789 aa7.56□□□□□ -1.2
LSM6YDR378C INP54Q08227 384 aaKnown RBP7.56□□□□□ -1.2
LSM6YDR378C GAR1P28007 205 aaKnown RBP7.55□□□□□ -1.2
LSM6YDR378C YIR007WP40566 764 aa7.55□□□□□ -1.2
LSM6YDR378C CAF120P53836 1060 aa7.55□□□□□ -1.2
LSM6YDR378C ADE12P80210 433 aaKnown RBP7.55□□□□□ -1.2
LSM6YDR378C RSC2Q06488 889 aa7.55□□□□□ -1.2
LSM6YDR378C PAM1P37304 830 aaKnown RBP7.53□□□□□ -1.2
LSM6YDR378C CEM1P39525 442 aa7.53□□□□□ -1.2
LSM6YDR378C MET10P39692 1035 aa7.53□□□□□ -1.2
LSM6YDR378C YER156CP40093 338 aaKnown RBP7.53□□□□□ -1.2
LSM6YDR378C FLP1P03870 423 aa7.52□□□□□ -1.21
LSM6YDR378C GBP2P25555 427 aaKnown RBP RIP-Chip data7.52□□□□□ -1.21not detected
LSM6YDR378C MET1P36150 593 aa7.52□□□□□ -1.21
LSM6YDR378C YCS4Q06156 1176 aa7.52□□□□□ -1.21
LSM6YDR378C YDR461C-AQ2V2P7 80 aa7.52□□□□□ -1.21
LSM6YDR378C PPT1P53043 513 aa7.51□□□□□ -1.21
LSM6YDR378C SVF1Q05515 481 aa7.51□□□□□ -1.21
LSM6YDR378C CCP1P00431 361 aa7.5□□□□□ -1.21
LSM6YDR378C PYC2P32327 1180 aaKnown RBP7.5□□□□□ -1.21
LSM6YDR378C CTR9P89105 1077 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms