RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SAC7P17121 654 aa5.5□□□□□ -1.53
CDC40YDR364C MTO1P53070 669 aa5.5□□□□□ -1.53
CDC40YDR364C CYT1P07143 309 aa5.49□□□□□ -1.53
CDC40YDR364C KAP122P32767 1081 aa5.48□□□□□ -1.53
CDC40YDR364C SFA1P32771 386 aa5.48□□□□□ -1.53
CDC40YDR364C ARI1P53111 347 aaKnown RBP5.48□□□□□ -1.53
CDC40YDR364C RRM3P38766 723 aa5.47□□□□□ -1.53
CDC40YDR364C YJL007CP47080 104 aa5.47□□□□□ -1.53
CDC40YDR364C CUS1Q02554 436 aaPredicted RBP5.47□□□□□ -1.53
CDC40YDR364C GAS5Q08193 484 aa5.47□□□□□ -1.53
CDC40YDR364C ENO1P00924 437 aaKnown RBP5.46□□□□□ -1.54
CDC40YDR364C PEP12P32854 288 aa5.46□□□□□ -1.54
CDC40YDR364C APM2P38700 605 aa5.46□□□□□ -1.54
CDC40YDR364C YNR040WP53736 256 aa5.46□□□□□ -1.54
CDC40YDR364C DMA2P53924 522 aa5.45□□□□□ -1.54
CDC40YDR364C UBP1P25037 809 aa5.44□□□□□ -1.54
CDC40YDR364C SCD5P34758 872 aa5.44□□□□□ -1.54
CDC40YDR364C NAB2P32505 525 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
CDC40YDR364C HXT5P38695 592 aa5.43□□□□□ -1.54
CDC40YDR364C AVT1P47082 602 aa5.43□□□□□ -1.54
CDC40YDR364C RPC31P17890 251 aa5.42□□□□□ -1.54
CDC40YDR364C MED7Q08278 222 aa5.42□□□□□ -1.54
CDC40YDR364C SLP1Q12232 587 aa5.42□□□□□ -1.54
CDC40YDR364C NGR1P32831 672 aaKnown RBP5.42□□□□□ -1.54
CDC40YDR364C ACS2P52910 683 aaKnown RBP5.42□□□□□ -1.54
CDC40YDR364C TRP3P00937 484 aa5.41□□□□□ -1.54
CDC40YDR364C PHO87P25360 923 aa5.41□□□□□ -1.54
CDC40YDR364C COQ2P32378 372 aa5.41□□□□□ -1.54
CDC40YDR364C KAE1P36132 386 aa5.41□□□□□ -1.54
CDC40YDR364C YKR073CP36153 106 aa5.41□□□□□ -1.54
CDC40YDR364C TY1B-DR4Q07793 1604 aa5.4□□□□□ -1.55
CDC40YDR364C MRP10O75012 95 aa5.4□□□□□ -1.55
CDC40YDR364C TIF1P10081 395 aaKnown RBP5.4□□□□□ -1.55
CDC40YDR364C RTG2P32608 588 aaKnown RBP5.4□□□□□ -1.55
CDC40YDR364C BIM1P40013 344 aa5.4□□□□□ -1.55
CDC40YDR364C TY4B-PA0A0B7P3V8 1104 aa5.39□□□□□ -1.55
CDC40YDR364C HAP4P14064 554 aa5.39□□□□□ -1.55
CDC40YDR364C RSC6P25632 483 aa5.39□□□□□ -1.55
CDC40YDR364C ATG32P40458 529 aa5.39□□□□□ -1.55
CDC40YDR364C GAS4Q08271 471 aa5.39□□□□□ -1.55
CDC40YDR364C YLR122CQ12312 125 aa5.39□□□□□ -1.55
CDC40YDR364C TY4A-HQ6Q5P6 413 aa5.39□□□□□ -1.55
CDC40YDR364C IDI1P15496 288 aa5.38□□□□□ -1.55
CDC40YDR364C YER156CP40093 338 aaKnown RBP5.38□□□□□ -1.55
CDC40YDR364C SWR1Q05471 1514 aa5.37□□□□□ -1.55
CDC40YDR364C SPA2P23201 1466 aaKnown RBP5.37□□□□□ -1.55
CDC40YDR364C PUB1P32588 453 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
CDC40YDR364C SSN2P38931 1420 aa5.37□□□□□ -1.55
CDC40YDR364C QDR2P40474 542 aa5.36□□□□□ -1.55
CDC40YDR364C CTH1P47976 325 aa5.36□□□□□ -1.55
CDC40YDR364C ITC1P53125 1264 aa5.36□□□□□ -1.55
CDC40YDR364C SAF1P38352 637 aa5.35□□□□□ -1.55
CDC40YDR364C AOS1Q06624 347 aa5.35□□□□□ -1.55
CDC40YDR364C HSL1P34244 1518 aa5.35□□□□□ -1.55
CDC40YDR364C DNA2P38859 1522 aa5.35□□□□□ -1.55
CDC40YDR364C TY1A-NL1Q12391 440 aaKnown RBP5.34□□□□□ -1.55
CDC40YDR364C SPT6P23615 1451 aaKnown RBP5.34□□□□□ -1.55
CDC40YDR364C ELM1P32801 640 aa5.33□□□□□ -1.56
CDC40YDR364C LIP5P32875 414 aa5.33□□□□□ -1.56
CDC40YDR364C TOS1P38288 455 aa5.33□□□□□ -1.56
CDC40YDR364C GIP2P40036 548 aa5.33□□□□□ -1.56
CDC40YDR364C RPL34BP40525 121 aaKnown RBP5.33□□□□□ -1.56
CDC40YDR364C CHS2P14180 963 aa5.32□□□□□ -1.56
CDC40YDR364C ROM1P53046 1155 aa5.32□□□□□ -1.56
CDC40YDR364C DSE4P53753 1117 aa5.32□□□□□ -1.56
CDC40YDR364C BRE4Q07660 1125 aa5.32□□□□□ -1.56
CDC40YDR364C KTR7P40504 517 aa5.31□□□□□ -1.56
CDC40YDR364C TED1P40533 473 aa5.31□□□□□ -1.56
CDC40YDR364C YOR296WQ08748 1289 aa5.31□□□□□ -1.56
CDC40YDR364C GAL2P13181 574 aa5.3□□□□□ -1.56
CDC40YDR364C YGR130CP53278 816 aa5.3□□□□□ -1.56
CDC40YDR364C VAN1P23642 535 aa5.29□□□□□ -1.56
CDC40YDR364C SIS2P36024 562 aa5.29□□□□□ -1.56
CDC40YDR364C SOK2P53438 785 aaPredicted RBP5.29□□□□□ -1.56
CDC40YDR364C MAG2Q06436 670 aaKnown RBP5.29□□□□□ -1.56
CDC40YDR364C RLF2Q12495 606 aa5.29□□□□□ -1.56
CDC40YDR364C VMA3P25515 160 aa5.29□□□□□ -1.56
CDC40YDR364C SPO74P45819 413 aa5.29□□□□□ -1.56
CDC40YDR364C HGH1P48362 394 aaKnown RBP5.29□□□□□ -1.56
CDC40YDR364C RSC2Q06488 889 aa5.29□□□□□ -1.56
CDC40YDR364C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
CDC40YDR364C DYS1P38791 387 aa5.28□□□□□ -1.56
CDC40YDR364C CWH41P53008 833 aa5.28□□□□□ -1.56
CDC40YDR364C CAB1Q04430 367 aa5.28□□□□□ -1.56
CDC40YDR364C REC8Q12188 680 aa5.28□□□□□ -1.56
CDC40YDR364C KOG1P38873 1557 aa5.27□□□□□ -1.57
CDC40YDR364C MRPL33P20084 86 aa5.27□□□□□ -1.57
CDC40YDR364C NAM7P30771 971 aaKnown RBP5.27□□□□□ -1.57
CDC40YDR364C GIP1P38229 639 aa5.27□□□□□ -1.57
CDC40YDR364C SUV3P32580 737 aa5.26□□□□□ -1.57
CDC40YDR364C CYC7P00045 113 aa5.25□□□□□ -1.57
CDC40YDR364C AKR1P39010 764 aa5.25□□□□□ -1.57
CDC40YDR364C TRS33Q99394 268 aa5.25□□□□□ -1.57
CDC40YDR364C LDH1P38139 375 aa5.24□□□□□ -1.57
CDC40YDR364C BSD2P38356 321 aa5.24□□□□□ -1.57
CDC40YDR364C UBP5P39944 805 aa5.24□□□□□ -1.57
CDC40YDR364C YIL165CP40446 119 aa5.24□□□□□ -1.57
CDC40YDR364C HIR3P47171 1648 aa5.23□□□□□ -1.57
CDC40YDR364C MSB1P21339 1137 aaKnown RBP5.23□□□□□ -1.57
CDC40YDR364C ISW1P38144 1129 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms