RNA–Protein interactions for RNA: YDR201W

SPC19, Transcript of Essential subunit of the Dam1 complex (aka DASH complex), yeast

Gene SPC19, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC19	YDR201W	RSF2	P46974	1380 aa		5.04	□□□□□ -1.6
SPC19	YDR201W	RAD2	P07276	1031 aa		5.03	□□□□□ -1.6
SPC19	YDR201W	DAL5	P15365	543 aa		5.03	□□□□□ -1.6
SPC19	YDR201W	HSP104	P31539	908 aa	Known RBP	5.03	□□□□□ -1.6
SPC19	YDR201W	NTH2	P35172	780 aa		5.03	□□□□□ -1.6
SPC19	YDR201W	RRD1	P40454	393 aa	Known RBP	5.03	□□□□□ -1.6
SPC19	YDR201W	XKS1	P42826	600 aa		5.03	□□□□□ -1.6
SPC19	YDR201W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
SPC19	YDR201W	YNL050C	P53952	270 aa		5.03	□□□□□ -1.6
SPC19	YDR201W	YIL092W	P40497	633 aa		5.02	□□□□□ -1.61
SPC19	YDR201W	ERF2	Q06551	359 aa		5.02	□□□□□ -1.61
SPC19	YDR201W	AOS1	Q06624	347 aa		5.02	□□□□□ -1.61
SPC19	YDR201W	PAC1	P39946	494 aa	Known RBP	5.01	□□□□□ -1.61
SPC19	YDR201W	MAM1	P40065	302 aa		5.01	□□□□□ -1.61
SPC19	YDR201W	RRT14	P40470	206 aa		5.01	□□□□□ -1.61
SPC19	YDR201W	VPS70	P47161	811 aa		5.01	□□□□□ -1.61
SPC19	YDR201W	GYP7	P48365	746 aa		5.01	□□□□□ -1.61
SPC19	YDR201W	ZDS1	P50111	915 aa	Known RBP	5.01	□□□□□ -1.61
SPC19	YDR201W	CTF4	Q01454	927 aa		5.01	□□□□□ -1.61
SPC19	YDR201W	EDE1	P34216	1381 aa		5.01	□□□□□ -1.61
SPC19	YDR201W	ENT1	Q12518	454 aa		5	□□□□□ -1.61
SPC19	YDR201W	KCC4	P25389	1037 aa		4.99	□□□□□ -1.61
SPC19	YDR201W	YBR287W	P38355	427 aa		4.99	□□□□□ -1.61
SPC19	YDR201W	YJR115W	P47152	169 aa		4.99	□□□□□ -1.61
SPC19	YDR201W	PUS5	Q06244	254 aa		4.99	□□□□□ -1.61
SPC19	YDR201W	NUP145	P49687	1317 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	UGA3	P26370	528 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	IES2	P40154	320 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	POL32	P47110	350 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	TUB4	P53378	473 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	APP1	P53933	587 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	SRT1	Q03175	343 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	AGE1	Q04412	482 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	NSE3	Q05541	303 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	BMS1	Q08965	1183 aa	Known RBP	4.98	□□□□□ -1.61
SPC19	YDR201W	LYS2	P07702	1392 aa		4.98	□□□□□ -1.61
SPC19	YDR201W	COQ4	O13525	335 aa		4.97	□□□□□ -1.61
SPC19	YDR201W	RPC31	P17890	251 aa		4.97	□□□□□ -1.61
SPC19	YDR201W	CLB5	P30283	435 aa		4.97	□□□□□ -1.61
SPC19	YDR201W	MEC3	Q02574	474 aa		4.97	□□□□□ -1.61
SPC19	YDR201W	PUF6	Q04373	656 aa	Known RBP	4.97	□□□□□ -1.61
SPC19	YDR201W	INP54	Q08227	384 aa	Known RBP	4.97	□□□□□ -1.61
SPC19	YDR201W	PSE1	P32337	1089 aa	Known RBP	4.96	□□□□□ -1.62
SPC19	YDR201W	YFR016C	P43597	1233 aa	Known RBP	4.96	□□□□□ -1.62
SPC19	YDR201W	YPP1	P46951	817 aa		4.96	□□□□□ -1.62
SPC19	YDR201W	IMH1	Q06704	911 aa	Known RBP	4.96	□□□□□ -1.62
SPC19	YDR201W	ROM2	P51862	1356 aa	Known RBP	4.95	□□□□□ -1.62
SPC19	YDR201W	YKL133C	P36066	463 aa		4.95	□□□□□ -1.62
SPC19	YDR201W	ADE16	P54113	591 aa	Known RBP	4.95	□□□□□ -1.62
SPC19	YDR201W	MTC5	Q03897	1148 aa		4.95	□□□□□ -1.62
SPC19	YDR201W	CSI1	Q04368	295 aa		4.95	□□□□□ -1.62
SPC19	YDR201W	ALE1	Q08548	619 aa		4.95	□□□□□ -1.62
SPC19	YDR201W	UTP10	P42945	1769 aa	Known RBP	4.95	□□□□□ -1.62
SPC19	YDR201W	ATG13	Q06628	738 aa		4.94	□□□□□ -1.62
SPC19	YDR201W	NOP8	Q08287	484 aa	Predicted RBP	4.94	□□□□□ -1.62
SPC19	YDR201W	MRP7	P12687	371 aa		4.93	□□□□□ -1.62
SPC19	YDR201W	RAD4	P14736	754 aa		4.93	□□□□□ -1.62
SPC19	YDR201W	OSM1	P21375	501 aa	Known RBP	4.93	□□□□□ -1.62
SPC19	YDR201W	YNG2	P38806	282 aa	Known RBP	4.93	□□□□□ -1.62
SPC19	YDR201W	ACO2	P39533	789 aa		4.93	□□□□□ -1.62
SPC19	YDR201W	YNL115C	P53925	644 aa		4.93	□□□□□ -1.62
SPC19	YDR201W	YOL057W	Q08225	711 aa		4.93	□□□□□ -1.62
SPC19	YDR201W	RAD24	P32641	659 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	KXD1	P53158	218 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	YBP2	P53169	641 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	YGR122W	P53272	402 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	SPO1	P53541	631 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	CAF120	P53836	1060 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	SYH1	Q02875	849 aa	Known RBP	4.92	□□□□□ -1.62
SPC19	YDR201W	RMT2	Q03305	412 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	YLR346C	Q06139	101 aa		4.92	□□□□□ -1.62
SPC19	YDR201W	RPS19A	P07280	144 aa	Known RBP	4.91	□□□□□ -1.62
SPC19	YDR201W	RPS19B	P07281	144 aa	Predicted RBP	4.91	□□□□□ -1.62
SPC19	YDR201W	ZDS2	P54786	942 aa		4.91	□□□□□ -1.62
SPC19	YDR201W	YDR306C	Q06640	478 aa		4.91	□□□□□ -1.62
SPC19	YDR201W	NUP133	P36161	1157 aa		4.9	□□□□□ -1.63
SPC19	YDR201W	NMD2	P38798	1089 aa	Known RBP	4.9	□□□□□ -1.63
SPC19	YDR201W	DNM1	P54861	757 aa		4.9	□□□□□ -1.63
SPC19	YDR201W	FOX2	Q02207	900 aa	Known RBP	4.9	□□□□□ -1.63
SPC19	YDR201W	VPS64	Q03944	604 aa		4.9	□□□□□ -1.63
SPC19	YDR201W	ECM16	Q04217	1267 aa	Known RBP	4.9	□□□□□ -1.63
SPC19	YDR201W	DUR1,2	P32528	1835 aa	Known RBP	4.89	□□□□□ -1.63
SPC19	YDR201W	COB	P00163	385 aa		4.89	□□□□□ -1.63
SPC19	YDR201W	BOI2	P39969	1040 aa		4.89	□□□□□ -1.63
SPC19	YDR201W	DOT5	P40553	215 aa		4.89	□□□□□ -1.63
SPC19	YDR201W	HXT10	P43581	546 aa		4.89	□□□□□ -1.63
SPC19	YDR201W	SWI1	P09547	1314 aa		4.89	□□□□□ -1.63
SPC19	YDR201W	SIT4	P20604	311 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	TRK2	P28584	889 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	SWC3	P31376	625 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	YKR075C	P36155	307 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	PTK2	P47116	818 aa	Known RBP	4.88	□□□□□ -1.63
SPC19	YDR201W	NKP2	Q06162	153 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	OPT2	Q06593	877 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	SSP2	Q08646	371 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	SRF1	Q12516	437 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	RAD50	P12753	1312 aa		4.88	□□□□□ -1.63
SPC19	YDR201W	PBS2	P08018	668 aa		4.87	□□□□□ -1.63
SPC19	YDR201W	GRX1	P25373	110 aa	Known RBP	4.87	□□□□□ -1.63
SPC19	YDR201W	GCD7	P32502	381 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms