RNA–Protein interactions for RNA: YDR012W

RPL4B, Transcript of Ribosomal 60S subunit protein L4B, yeast

Gene RPL4B, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPL4B	YDR012W	RRI2	Q12348	645 aa		11.91	□□□□□ -0.5
RPL4B	YDR012W	FIG2	P25653	1609 aa		11.9	□□□□□ -0.5
RPL4B	YDR012W	GAP1	P19145	602 aa	Predicted RBP	11.9	□□□□□ -0.5
RPL4B	YDR012W	NMD2	P38798	1089 aa	Known RBP	11.9	□□□□□ -0.5
RPL4B	YDR012W	FPR3	P38911	411 aa	Known RBP	11.9	□□□□□ -0.5
RPL4B	YDR012W	ILV3	P39522	585 aa	Known RBP	11.9	□□□□□ -0.5
RPL4B	YDR012W	PIF1	P07271	859 aa		11.89	□□□□□ -0.51
RPL4B	YDR012W	ARG82	P07250	355 aa		11.88	□□□□□ -0.51
RPL4B	YDR012W	VPS4	P52917	437 aa		11.88	□□□□□ -0.51
RPL4B	YDR012W	YGR117C	P53270	476 aa		11.88	□□□□□ -0.51
RPL4B	YDR012W	ACK1	Q07622	623 aa	Predicted RBP	11.88	□□□□□ -0.51
RPL4B	YDR012W	WRS1	Q12109	432 aa	Known RBP	11.88	□□□□□ -0.51
RPL4B	YDR012W	DUR1,2	P32528	1835 aa	Known RBP	11.88	□□□□□ -0.51
RPL4B	YDR012W	VHR2	P40041	505 aa		11.87	□□□□□ -0.51
RPL4B	YDR012W	TOS4	Q06266	489 aa		11.87	□□□□□ -0.51
RPL4B	YDR012W	HPR1	P17629	752 aa	Known RBP	11.86	□□□□□ -0.51
RPL4B	YDR012W	EMP47	P43555	445 aa		11.86	□□□□□ -0.51
RPL4B	YDR012W	YFH7	P43591	353 aa		11.86	□□□□□ -0.51
RPL4B	YDR012W	BDP1	P46678	594 aa		11.86	□□□□□ -0.51
RPL4B	YDR012W	YNL193W	P53870	558 aa		11.86	□□□□□ -0.51
RPL4B	YDR012W	STV1	P37296	890 aa		11.85	□□□□□ -0.51
RPL4B	YDR012W	AI2	P03876	854 aa		11.84	□□□□□ -0.51
RPL4B	YDR012W	RPS7A	P26786	190 aa	Known RBP	11.84	□□□□□ -0.51
RPL4B	YDR012W	GLO3	P38682	493 aa	Known RBP	11.84	□□□□□ -0.51
RPL4B	YDR012W	YGL242C	P53066	181 aa		11.84	□□□□□ -0.51
RPL4B	YDR012W	FLO11	P08640	1367 aa		11.83	□□□□□ -0.52
RPL4B	YDR012W	RPT3	P33298	428 aa	Known RBP	11.83	□□□□□ -0.52
RPL4B	YDR012W	PEA2	P40091	420 aa		11.83	□□□□□ -0.52
RPL4B	YDR012W	MLC1	P53141	149 aa		11.83	□□□□□ -0.52
RPL4B	YDR012W	RPN7	Q06103	429 aa	Known RBP	11.83	□□□□□ -0.52
RPL4B	YDR012W	PDR18	P53756	1333 aa		11.83	□□□□□ -0.52
RPL4B	YDR012W	HAL5	P38970	855 aa	Known RBP	11.82	□□□□□ -0.52
RPL4B	YDR012W	YIR042C	P40586	236 aa		11.82	□□□□□ -0.52
RPL4B	YDR012W	INM2	Q05533	292 aa		11.82	□□□□□ -0.52
RPL4B	YDR012W	PUS6	P53294	404 aa		11.81	□□□□□ -0.52
RPL4B	YDR012W	MDL2	P33311	773 aa		11.8	□□□□□ -0.52
RPL4B	YDR012W	PTK1	P36002	662 aa	Predicted RBP	11.8	□□□□□ -0.52
RPL4B	YDR012W	CWC15	Q03772	175 aa	Known RBP	11.8	□□□□□ -0.52
RPL4B	YDR012W	NOT3	P06102	836 aa	Known RBP	11.79	□□□□□ -0.52
RPL4B	YDR012W	APL6	P46682	809 aa		11.79	□□□□□ -0.52
RPL4B	YDR012W	CBP1	P07252	654 aa		11.78	□□□□□ -0.52
RPL4B	YDR012W	ECM21	P38167	1117 aa	Known RBP	11.78	□□□□□ -0.52
RPL4B	YDR012W	RFC1	P38630	861 aa	Known RBP	11.78	□□□□□ -0.52
RPL4B	YDR012W	ECM16	Q04217	1267 aa	Known RBP	11.78	□□□□□ -0.52
RPL4B	YDR012W	CYB2	P00175	591 aa		11.77	□□□□□ -0.53
RPL4B	YDR012W	RRD1	P40454	393 aa	Known RBP	11.77	□□□□□ -0.53
RPL4B	YDR012W	YIL089W	P40500	205 aa		11.77	□□□□□ -0.53
RPL4B	YDR012W	FAP1	P53971	965 aa		11.77	□□□□□ -0.53
RPL4B	YDR012W	BOI1	P38041	980 aa	Known RBP	11.76	□□□□□ -0.53
RPL4B	YDR012W	KTR3	P38130	404 aa	Predicted RBP	11.76	□□□□□ -0.53
RPL4B	YDR012W	MTC3	P53077	123 aa		11.76	□□□□□ -0.53
RPL4B	YDR012W	ALO1	P54783	526 aa	Known RBP	11.76	□□□□□ -0.53
RPL4B	YDR012W	AAD16	Q02895	342 aa		11.76	□□□□□ -0.53
RPL4B	YDR012W	UTP7	P40055	554 aa	Known RBP	11.75	□□□□□ -0.53
RPL4B	YDR012W	TYW1	Q08960	810 aa	Known RBP	11.75	□□□□□ -0.53
RPL4B	YDR012W	TOM1	Q03280	3268 aa		11.75	□□□□□ -0.53
RPL4B	YDR012W	SNF3	P10870	884 aa		11.74	□□□□□ -0.53
RPL4B	YDR012W	GEF1	P37020	779 aa		11.74	□□□□□ -0.53
RPL4B	YDR012W	PBY1	P38254	753 aa		11.74	□□□□□ -0.53
RPL4B	YDR012W	NIT1	P40447	199 aa		11.74	□□□□□ -0.53
RPL4B	YDR012W	YJL171C	P46992	396 aa		11.74	□□□□□ -0.53
RPL4B	YDR012W	ENP2	P48234	707 aa	Known RBP	11.74	□□□□□ -0.53
RPL4B	YDR012W	PIP2	P52960	996 aa		11.74	□□□□□ -0.53
RPL4B	YDR012W	BRE1	Q07457	700 aa	Known RBP	11.74	□□□□□ -0.53
RPL4B	YDR012W	CDC16	P09798	840 aa		11.73	□□□□□ -0.53
RPL4B	YDR012W	GAL2	P13181	574 aa		11.72	□□□□□ -0.53
RPL4B	YDR012W	NPL4	P33755	580 aa		11.72	□□□□□ -0.53
RPL4B	YDR012W	OSH3	P38713	996 aa	Known RBP	11.72	□□□□□ -0.53
RPL4B	YDR012W	RRT6	P53117	311 aa	Predicted RBP	11.72	□□□□□ -0.53
RPL4B	YDR012W	NKP2	Q06162	153 aa		11.72	□□□□□ -0.53
RPL4B	YDR012W	GRX7	P38068	203 aa		11.71	□□□□□ -0.53
RPL4B	YDR012W	RMD1	Q03441	430 aa		11.71	□□□□□ -0.53
RPL4B	YDR012W	EPS1	P40557	701 aa		11.7	□□□□□ -0.54
RPL4B	YDR012W	NOP2	P40991	618 aa	Known RBP	11.7	□□□□□ -0.54
RPL4B	YDR012W	YMR147W	P40218	223 aa	Known RBP	11.69	□□□□□ -0.54
RPL4B	YDR012W	IOC3	P43596	787 aa		11.69	□□□□□ -0.54
RPL4B	YDR012W	IRC8	P47046	822 aa		11.69	□□□□□ -0.54
RPL4B	YDR012W	CSR2	Q12734	1121 aa		11.69	□□□□□ -0.54
RPL4B	YDR012W	BSD2	P38356	321 aa		11.68	□□□□□ -0.54
RPL4B	YDR012W	MRPS35	P53292	345 aa		11.68	□□□□□ -0.54
RPL4B	YDR012W	ADP1	P25371	1049 aa		11.67	□□□□□ -0.54
RPL4B	YDR012W	KTR1	P27810	393 aa	Known RBP	11.67	□□□□□ -0.54
RPL4B	YDR012W	TPS3	P38426	1054 aa	Known RBP	11.67	□□□□□ -0.54
RPL4B	YDR012W	ETP1	P38748	585 aa	Known RBP	11.67	□□□□□ -0.54
RPL4B	YDR012W	MSH4	P40965	878 aa	Predicted RBP	11.67	□□□□□ -0.54
RPL4B	YDR012W	PCL8	Q08966	492 aa		11.67	□□□□□ -0.54
RPL4B	YDR012W	RAD50	P12753	1312 aa		11.66	□□□□□ -0.54
RPL4B	YDR012W	PMA1	P05030	918 aa	Known RBP	11.66	□□□□□ -0.54
RPL4B	YDR012W	RAD53	P22216	821 aa		11.66	□□□□□ -0.54
RPL4B	YDR012W	STM1	P39015	273 aa	Known RBP	11.66	□□□□□ -0.54
RPL4B	YDR012W	FLO1	P32768	1537 aa		11.65	□□□□□ -0.54
RPL4B	YDR012W	PNT1	P38969	423 aa		11.65	□□□□□ -0.54
RPL4B	YDR012W	PIB2	P53191	635 aa		11.65	□□□□□ -0.54
RPL4B	YDR012W	NSG2	P53898	299 aa		11.65	□□□□□ -0.54
RPL4B	YDR012W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	11.64	□□□□□ -0.55	not detected
RPL4B	YDR012W	KAR5	Q04746	504 aa		11.64	□□□□□ -0.55
RPL4B	YDR012W	YPL260W	Q08977	551 aa		11.64	□□□□□ -0.55
RPL4B	YDR012W	KEL3	Q08979	651 aa	Predicted RBP	11.64	□□□□□ -0.55
RPL4B	YDR012W	TAH18	Q12181	623 aa		11.64	□□□□□ -0.55
RPL4B	YDR012W	VAS1	P07806	1104 aa	Known RBP	11.63	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms