RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W VAC8P39968 578 aa8.16□□□□□ -1.1
TRP1YDR007W FIR1P40020 876 aa8.16□□□□□ -1.1
TRP1YDR007W FPR4Q06205 392 aaPredicted RBP8.16□□□□□ -1.1
TRP1YDR007W CLN2P20438 545 aa8.15□□□□□ -1.1
TRP1YDR007W RAD55P38953 406 aa8.15□□□□□ -1.1
TRP1YDR007W YGR122WP53272 402 aa8.15□□□□□ -1.1
TRP1YDR007W ALD6P54115 500 aaKnown RBP8.15□□□□□ -1.1
TRP1YDR007W BSC2Q05611 235 aa8.15□□□□□ -1.1
TRP1YDR007W ESF1Q06344 628 aaKnown RBP8.15□□□□□ -1.1
TRP1YDR007W PIN2Q12057 282 aa8.15□□□□□ -1.1
TRP1YDR007W ALD3P54114 506 aa8.14□□□□□ -1.11
TRP1YDR007W VPS16Q03308 798 aa8.14□□□□□ -1.11
TRP1YDR007W YOL098CQ12496 1037 aa8.14□□□□□ -1.11
TRP1YDR007W QDR2P40474 542 aa8.13□□□□□ -1.11
TRP1YDR007W YNL165WP53891 406 aa8.13□□□□□ -1.11
TRP1YDR007W CYC8P14922 966 aa8.12□□□□□ -1.11
TRP1YDR007W MLF3P32047 452 aa8.12□□□□□ -1.11
TRP1YDR007W NTA1P40354 457 aa8.12□□□□□ -1.11
TRP1YDR007W MSN1P22148 382 aa8.11□□□□□ -1.11
TRP1YDR007W BRN1P38170 754 aa8.11□□□□□ -1.11
TRP1YDR007W YBR287WP38355 427 aa8.11□□□□□ -1.11
TRP1YDR007W YTA6P40328 754 aa8.11□□□□□ -1.11
TRP1YDR007W UGA3P26370 528 aa8.1□□□□□ -1.11
TRP1YDR007W PET112P33893 541 aa8.1□□□□□ -1.11
TRP1YDR007W IRS4P36115 615 aaKnown RBP8.1□□□□□ -1.11
TRP1YDR007W SSN3P39073 555 aa8.1□□□□□ -1.11
TRP1YDR007W RGD2P43556 714 aa8.1□□□□□ -1.11
TRP1YDR007W INP54Q08227 384 aaKnown RBP8.1□□□□□ -1.11
TRP1YDR007W RAD2P07276 1031 aa8.09□□□□□ -1.11
TRP1YDR007W AMS1P22855 1083 aa8.09□□□□□ -1.11
TRP1YDR007W MNR2P35724 969 aa8.09□□□□□ -1.11
TRP1YDR007W PSY2P40164 858 aa8.09□□□□□ -1.11
TRP1YDR007W MET32Q12041 191 aa8.09□□□□□ -1.11
TRP1YDR007W WRS1Q12109 432 aaKnown RBP8.09□□□□□ -1.11
TRP1YDR007W HXK1P04806 485 aaKnown RBP8.08□□□□□ -1.12
TRP1YDR007W ARG82P07250 355 aa8.08□□□□□ -1.12
TRP1YDR007W KAP122P32767 1081 aa8.08□□□□□ -1.12
TRP1YDR007W YHL008CP38750 627 aa8.08□□□□□ -1.12
TRP1YDR007W JJJ2P46997 583 aa8.08□□□□□ -1.12
TRP1YDR007W MSN5P52918 1224 aa8.08□□□□□ -1.12
TRP1YDR007W CWC24P53769 259 aa8.08□□□□□ -1.12
TRP1YDR007W IOC4Q04213 475 aa8.08□□□□□ -1.12
TRP1YDR007W TOS4Q06266 489 aa8.08□□□□□ -1.12
TRP1YDR007W TIF6Q12522 245 aaKnown RBP8.08□□□□□ -1.12
TRP1YDR007W DAL4Q04895 635 aa8.07□□□□□ -1.12
TRP1YDR007W RPS31P05759 152 aaKnown RBP8.06□□□□□ -1.12
TRP1YDR007W SRP40P32583 406 aaPredicted RBP8.06□□□□□ -1.12
TRP1YDR007W ISW1P38144 1129 aa8.06□□□□□ -1.12
TRP1YDR007W FAA3P39002 694 aa8.06□□□□□ -1.12
TRP1YDR007W RGA1P39083 1007 aa8.06□□□□□ -1.12
TRP1YDR007W MRPS18P42847 217 aa8.06□□□□□ -1.12
TRP1YDR007W MTO1P53070 669 aa8.06□□□□□ -1.12
TRP1YDR007W YCS4Q06156 1176 aa8.06□□□□□ -1.12
TRP1YDR007W AHP1P38013 176 aaKnown RBP8.05□□□□□ -1.12
TRP1YDR007W NMD2P38798 1089 aaKnown RBP8.05□□□□□ -1.12
TRP1YDR007W AAD14P42884 376 aa8.05□□□□□ -1.12
TRP1YDR007W CLA4P48562 842 aa8.05□□□□□ -1.12
TRP1YDR007W IRE1P32361 1115 aa8.04□□□□□ -1.12
TRP1YDR007W SHM1P37292 490 aaPredicted RBP8.04□□□□□ -1.12
TRP1YDR007W GIP1P38229 639 aa8.04□□□□□ -1.12
TRP1YDR007W MSB3P48566 633 aaPredicted RBP8.04□□□□□ -1.12
TRP1YDR007W HST3P53687 447 aa8.04□□□□□ -1.12
TRP1YDR007W DOS2P54858 310 aa8.04□□□□□ -1.12
TRP1YDR007W MCD1Q12158 566 aa8.04□□□□□ -1.12
TRP1YDR007W PRP40P33203 583 aaKnown RBP8.03□□□□□ -1.12
TRP1YDR007W YAF9P53930 226 aa8.03□□□□□ -1.12
TRP1YDR007W YOR296WQ08748 1289 aa8.03□□□□□ -1.12
TRP1YDR007W FLP1P03870 423 aa8.02□□□□□ -1.13
TRP1YDR007W KAR2P16474 682 aaKnown RBP8.02□□□□□ -1.13
TRP1YDR007W SPC42P36094 363 aa8.02□□□□□ -1.13
TRP1YDR007W ECM2P38241 364 aaKnown RBP8.02□□□□□ -1.13
TRP1YDR007W BSD2P38356 321 aa8.02□□□□□ -1.13
TRP1YDR007W XDJ1P39102 459 aa8.02□□□□□ -1.13
TRP1YDR007W YJL049WP47048 450 aa8.02□□□□□ -1.13
TRP1YDR007W SSF2Q12153 453 aaPredicted RBP8.02□□□□□ -1.13
TRP1YDR007W CDC4P07834 779 aa8.01□□□□□ -1.13
TRP1YDR007W RPC31P17890 251 aa8.01□□□□□ -1.13
TRP1YDR007W AFT1P22149 690 aa8.01□□□□□ -1.13
TRP1YDR007W PRE9P23638 258 aaKnown RBP8.01□□□□□ -1.13
TRP1YDR007W ASH1P34233 588 aa8.01□□□□□ -1.13
TRP1YDR007W AIM46P38885 310 aa8.01□□□□□ -1.13
TRP1YDR007W YKL091CP33324 310 aaKnown RBP8□□□□□ -1.13
TRP1YDR007W RNH70P53331 553 aa8□□□□□ -1.13
TRP1YDR007W DAL1P32375 460 aa7.99□□□□□ -1.13
TRP1YDR007W IOC3P43596 787 aa7.99□□□□□ -1.13
TRP1YDR007W OSW7P43611 510 aa7.99□□□□□ -1.13
TRP1YDR007W SRF1Q12516 437 aa7.99□□□□□ -1.13
TRP1YDR007W PDC6P26263 563 aaKnown RBP7.98□□□□□ -1.13
TRP1YDR007W NAB2P32505 525 aaKnown RBP RIP-Chip data7.98□□□□□ -1.13not detected
TRP1YDR007W DLD1P32891 587 aa7.98□□□□□ -1.13
TRP1YDR007W NSE3Q05541 303 aa7.98□□□□□ -1.13
TRP1YDR007W PSH1Q12161 406 aa7.98□□□□□ -1.13
TRP1YDR007W SLA1P32790 1244 aa7.97□□□□□ -1.13
TRP1YDR007W GDE1Q02979 1223 aa7.97□□□□□ -1.13
TRP1YDR007W YPL109CQ02981 657 aa7.97□□□□□ -1.13
TRP1YDR007W EMG1Q06287 252 aaKnown RBP7.97□□□□□ -1.13
TRP1YDR007W RAS1P01119 309 aa7.96□□□□□ -1.14
TRP1YDR007W LEU1P07264 779 aaKnown RBP7.96□□□□□ -1.14
TRP1YDR007W STI1P15705 589 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
TRP1YDR007W MCM5P29496 775 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms