RNA–Protein interactions for RNA: YDL108W

KIN28, Transcript of Serine/threonine protein kinase, subunit of transcription factor TFIIH, yeastyeast

Gene KIN28, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KIN28YDL108W LSB3P43603 459 aaKnown RBP6.39□□□□□ -1.39
KIN28YDL108W SUT1P53032 299 aaKnown RBP6.39□□□□□ -1.39
KIN28YDL108W TY1A-MR1Q04215 440 aa6.39□□□□□ -1.39
KIN28YDL108W MSC6Q08818 692 aaKnown RBP6.39□□□□□ -1.39
KIN28YDL108W TY1A-DR3Q12441 440 aa6.39□□□□□ -1.39
KIN28YDL108W CCP1P00431 361 aa6.38□□□□□ -1.39
KIN28YDL108W VMA3P25515 160 aa6.38□□□□□ -1.39
KIN28YDL108W SLA1P32790 1244 aa6.38□□□□□ -1.39
KIN28YDL108W OSH7P38755 437 aa6.38□□□□□ -1.39
KIN28YDL108W THI12P42883 340 aa6.38□□□□□ -1.39
KIN28YDL108W THI5P43534 340 aa6.38□□□□□ -1.39
KIN28YDL108W THI11P47183 340 aa6.38□□□□□ -1.39
KIN28YDL108W NUT2Q06213 157 aa6.38□□□□□ -1.39
KIN28YDL108W THI13Q07748 340 aa6.38□□□□□ -1.39
KIN28YDL108W APC11Q12157 165 aa6.38□□□□□ -1.39
KIN28YDL108W PUS1Q12211 544 aaKnown RBP6.38□□□□□ -1.39
KIN28YDL108W HEM3P28789 327 aa6.37□□□□□ -1.39
KIN28YDL108W LDH1P38139 375 aa6.37□□□□□ -1.39
KIN28YDL108W DYS1P38791 387 aa6.37□□□□□ -1.39
KIN28YDL108W QDR2P40474 542 aa6.37□□□□□ -1.39
KIN28YDL108W MTO1P53070 669 aa6.37□□□□□ -1.39
KIN28YDL108W UFD2P54860 961 aa6.37□□□□□ -1.39
KIN28YDL108W RPS31P05759 152 aaKnown RBP6.36□□□□□ -1.39
KIN28YDL108W PDC6P26263 563 aaKnown RBP6.36□□□□□ -1.39
KIN28YDL108W MDJ1P35191 511 aa6.36□□□□□ -1.39
KIN28YDL108W PPX1P38698 397 aa6.36□□□□□ -1.39
KIN28YDL108W UBP15P50101 1230 aa6.36□□□□□ -1.39
KIN28YDL108W ORC1P54784 914 aaPredicted RBP6.36□□□□□ -1.39
KIN28YDL108W PSH1Q12161 406 aa6.36□□□□□ -1.39
KIN28YDL108W DPH6Q12429 685 aa6.36□□□□□ -1.39
KIN28YDL108W FRT1Q99332 602 aa6.36□□□□□ -1.39
KIN28YDL108W TOP1P04786 769 aa6.35□□□□□ -1.39
KIN28YDL108W HXT8P40886 569 aa6.35□□□□□ -1.39
KIN28YDL108W TRS120Q04183 1289 aa6.35□□□□□ -1.39
KIN28YDL108W KAP122P32767 1081 aa6.34□□□□□ -1.39
KIN28YDL108W SNU71P53207 620 aaKnown RBP6.34□□□□□ -1.39
KIN28YDL108W CDC19P00549 500 aaKnown RBP6.33□□□□□ -1.4
KIN28YDL108W SMC1P32908 1225 aa6.33□□□□□ -1.4
KIN28YDL108W FIR1P40020 876 aa6.33□□□□□ -1.4
KIN28YDL108W LEU1P07264 779 aaKnown RBP6.32□□□□□ -1.4
KIN28YDL108W ASF1P32447 279 aa6.32□□□□□ -1.4
KIN28YDL108W ALD2P47771 506 aa6.32□□□□□ -1.4
KIN28YDL108W WHI5Q12416 295 aa6.32□□□□□ -1.4
KIN28YDL108W KTR2P33550 425 aa6.31□□□□□ -1.4
KIN28YDL108W PHM7Q12252 991 aa6.31□□□□□ -1.4
KIN28YDL108W YBR287WP38355 427 aa6.3□□□□□ -1.4
KIN28YDL108W RAD55P38953 406 aa6.3□□□□□ -1.4
KIN28YDL108W LYS5P50113 272 aa6.3□□□□□ -1.4
KIN28YDL108W STB3Q12427 513 aa6.3□□□□□ -1.4
KIN28YDL108W RPC31P17890 251 aa6.29□□□□□ -1.4
KIN28YDL108W MSN1P22148 382 aa6.29□□□□□ -1.4
KIN28YDL108W ISW1P38144 1129 aa6.29□□□□□ -1.4
KIN28YDL108W GIP1P38229 639 aa6.29□□□□□ -1.4
KIN28YDL108W POL32P47110 350 aa6.29□□□□□ -1.4
KIN28YDL108W NAM8Q00539 523 aaKnown RBP6.29□□□□□ -1.4
KIN28YDL108W CUS1Q02554 436 aaPredicted RBP6.29□□□□□ -1.4
KIN28YDL108W YOR296WQ08748 1289 aa6.29□□□□□ -1.4
KIN28YDL108W RPP1AP05318 106 aaPredicted RBP6.28□□□□□ -1.4
KIN28YDL108W RGP1P16664 663 aa6.28□□□□□ -1.4
KIN28YDL108W MRPL16P38064 232 aa6.28□□□□□ -1.4
KIN28YDL108W BSD2P38356 321 aa6.28□□□□□ -1.4
KIN28YDL108W JJJ3P47138 172 aa6.28□□□□□ -1.4
KIN28YDL108W NTA1P40354 457 aa6.27□□□□□ -1.41
KIN28YDL108W MET4P32389 672 aa6.26□□□□□ -1.41
KIN28YDL108W IRS4P36115 615 aaKnown RBP6.26□□□□□ -1.41
KIN28YDL108W YNL011CP53980 444 aa6.26□□□□□ -1.41
KIN28YDL108W CDC55Q00362 526 aa6.26□□□□□ -1.41
KIN28YDL108W NCL1P38205 684 aaKnown RBP6.25□□□□□ -1.41
KIN28YDL108W MGE1P38523 228 aa6.25□□□□□ -1.41
KIN28YDL108W RGD2P43556 714 aa6.25□□□□□ -1.41
KIN28YDL108W SKP1P52286 194 aa6.25□□□□□ -1.41
KIN28YDL108W NSG2P53898 299 aa6.25□□□□□ -1.41
KIN28YDL108W GPI13Q07830 1017 aa6.25□□□□□ -1.41
KIN28YDL108W MNL2Q12205 849 aa6.25□□□□□ -1.41
KIN28YDL108W TIF6Q12522 245 aaKnown RBP6.25□□□□□ -1.41
KIN28YDL108W GCD6P32501 712 aaKnown RBP6.24□□□□□ -1.41
KIN28YDL108W APM2P38700 605 aa6.24□□□□□ -1.41
KIN28YDL108W PSY2P40164 858 aa6.24□□□□□ -1.41
KIN28YDL108W YMR265CQ03508 461 aaKnown RBP6.24□□□□□ -1.41
KIN28YDL108W BSC2Q05611 235 aa6.24□□□□□ -1.41
KIN28YDL108W AIM46P38885 310 aa6.23□□□□□ -1.41
KIN28YDL108W YFL066CP43538 392 aa6.23□□□□□ -1.41
KIN28YDL108W SAM37P50110 327 aa6.23□□□□□ -1.41
KIN28YDL108W ATE1P16639 503 aa6.22□□□□□ -1.41
KIN28YDL108W DIT1P21623 536 aa6.22□□□□□ -1.41
KIN28YDL108W NAB2P32505 525 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
KIN28YDL108W CUZ1P53899 274 aa6.22□□□□□ -1.41
KIN28YDL108W RSC4Q02206 625 aa6.22□□□□□ -1.41
KIN28YDL108W THI72Q08579 599 aa6.22□□□□□ -1.41
KIN28YDL108W CIC1P38779 376 aaKnown RBP6.21□□□□□ -1.42
KIN28YDL108W ITC1P53125 1264 aa6.21□□□□□ -1.42
KIN28YDL108W NRD1P53617 575 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42 RIP-Chip
KIN28YDL108W KRE33P53914 1056 aaKnown RBP6.21□□□□□ -1.42
KIN28YDL108W RRP15Q06511 250 aaPredicted RBP6.21□□□□□ -1.42
KIN28YDL108W NOC3Q07896 663 aaPredicted RBP6.21□□□□□ -1.42
KIN28YDL108W PHO4P07270 312 aaKnown RBP6.2□□□□□ -1.42
KIN28YDL108W FPS1P23900 669 aa6.2□□□□□ -1.42
KIN28YDL108W RPT1P33299 467 aaKnown RBP6.2□□□□□ -1.42
KIN28YDL108W NOP7P53261 605 aaKnown RBP6.2□□□□□ -1.42
KIN28YDL108W EMG1Q06287 252 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms