RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C RAD3P06839 778 aa1.28□□□□□ -2.21
VAM6YDL077C ARD1P07347 238 aaPredicted RBP1.28□□□□□ -2.21
VAM6YDL077C THR4P16120 514 aaKnown RBP1.28□□□□□ -2.21
VAM6YDL077C RPC31P17890 251 aa1.28□□□□□ -2.21
VAM6YDL077C DIT2P21595 489 aa1.28□□□□□ -2.21
VAM6YDL077C MDJ1P35191 511 aa1.28□□□□□ -2.21
VAM6YDL077C VPS27P40343 622 aaKnown RBP1.28□□□□□ -2.21
VAM6YDL077C NUP42P49686 430 aaKnown RBP1.28□□□□□ -2.21
VAM6YDL077C ENV11P53246 860 aa1.28□□□□□ -2.21
VAM6YDL077C RNT1Q02555 471 aa1.28□□□□□ -2.21
VAM6YDL077C YPR053CQ6Q5F3 151 aa1.28□□□□□ -2.21
VAM6YDL077C SSM4P40318 1319 aa1.28□□□□□ -2.21
VAM6YDL077C ESS1P22696 170 aa1.27□□□□□ -2.21
VAM6YDL077C CDC10P25342 322 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C ZUO1P32527 433 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C MPE1P35728 441 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C DLD3P39976 496 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C HYR1P40581 163 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C EMW1P42842 904 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C STU2P46675 888 aa1.27□□□□□ -2.21
VAM6YDL077C YGL081WP53156 320 aa1.27□□□□□ -2.21
VAM6YDL077C PXR1P53335 271 aaPredicted RBP1.27□□□□□ -2.21
VAM6YDL077C ORC1P54784 914 aaPredicted RBP1.27□□□□□ -2.21
VAM6YDL077C VPS60Q03390 229 aa1.27□□□□□ -2.21
VAM6YDL077C ECM16Q04217 1267 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C COG8Q04632 607 aa1.27□□□□□ -2.21
VAM6YDL077C ABP140Q08641 628 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C APL5Q08951 932 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C YOL087CQ99247 1116 aa1.27□□□□□ -2.21
VAM6YDL077C YCF1P39109 1515 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C CDC25P04821 1589 aa1.27□□□□□ -2.21
VAM6YDL077C AUS1Q08409 1394 aa1.27□□□□□ -2.21
VAM6YDL077C ARG8P18544 423 aa1.27□□□□□ -2.21
VAM6YDL077C RPL5P26321 297 aaKnown RBP1.27□□□□□ -2.21
VAM6YDL077C SAP190P36123 1033 aa1.27□□□□□ -2.21
VAM6YDL077C BUD27P43573 796 aaKnown RBP RIP-Chip data1.27□□□□□ -2.21not detected
VAM6YDL077C NNF2P53253 936 aa1.27□□□□□ -2.21
VAM6YDL077C TLG1Q03322 224 aa1.27□□□□□ -2.21
VAM6YDL077C PRP3Q03338 469 aaPredicted RBP1.27□□□□□ -2.21
VAM6YDL077C ERV41Q04651 352 aa1.27□□□□□ -2.21
VAM6YDL077C YSH1Q06224 779 aaPredicted RBP1.27□□□□□ -2.21
VAM6YDL077C RPO31P04051 1460 aa1.27□□□□□ -2.21
VAM6YDL077C SIR4P11978 1358 aa1.27□□□□□ -2.21
VAM6YDL077C DRS2P39524 1355 aa1.27□□□□□ -2.21
VAM6YDL077C TY3B-GQ99315 1547 aa1.27□□□□□ -2.21
VAM6YDL077C DOP1Q03921 1698 aa1.27□□□□□ -2.21
VAM6YDL077C SWI6P09959 803 aa1.26□□□□□ -2.21
VAM6YDL077C MSP1P28737 362 aa1.26□□□□□ -2.21
VAM6YDL077C PPX1P38698 397 aa1.26□□□□□ -2.21
VAM6YDL077C NPR3P38742 1146 aa1.26□□□□□ -2.21
VAM6YDL077C CEP3P40969 608 aa1.26□□□□□ -2.21
VAM6YDL077C VID30P53076 958 aa1.26□□□□□ -2.21
VAM6YDL077C SNU71P53207 620 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C ADE12P80210 433 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C YMR265CQ03508 461 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C KOG1P38873 1557 aa1.26□□□□□ -2.21
VAM6YDL077C RAD50P12753 1312 aa1.26□□□□□ -2.21
VAM6YDL077C RPA190P10964 1664 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C PET123P17558 318 aa1.26□□□□□ -2.21
VAM6YDL077C YME2P32843 850 aa1.26□□□□□ -2.21
VAM6YDL077C VPS8P39702 1274 aa1.26□□□□□ -2.21
VAM6YDL077C SLN1P39928 1220 aaPredicted RBP1.26□□□□□ -2.21
VAM6YDL077C TPM2P40414 161 aa1.26□□□□□ -2.21
VAM6YDL077C NDC80P40460 691 aa1.26□□□□□ -2.21
VAM6YDL077C CCT8P47079 568 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C NOP15P53927 220 aaPredicted RBP1.26□□□□□ -2.21
VAM6YDL077C DOS2P54858 310 aa1.26□□□□□ -2.21
VAM6YDL077C PKH3Q03306 898 aaPredicted RBP1.26□□□□□ -2.21
VAM6YDL077C INP2Q03824 705 aa1.26□□□□□ -2.21
VAM6YDL077C ESC2Q06340 456 aa1.26□□□□□ -2.21
VAM6YDL077C YRM1Q12340 786 aa1.26□□□□□ -2.21
VAM6YDL077C HIF1Q12373 385 aa1.26□□□□□ -2.21
VAM6YDL077C SEC39Q12745 709 aa1.26□□□□□ -2.21
VAM6YDL077C DNF2Q12675 1612 aa1.26□□□□□ -2.21
VAM6YDL077C CCP1P00431 361 aa1.26□□□□□ -2.21
VAM6YDL077C CDC19P00549 500 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C YJU3P28321 313 aa1.26□□□□□ -2.21
VAM6YDL077C IAH1P41734 238 aa1.26□□□□□ -2.21
VAM6YDL077C POL31P46957 487 aa1.26□□□□□ -2.21
VAM6YDL077C MPP10P47083 593 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C CCM1P48237 864 aaPredicted RBP1.26□□□□□ -2.21
VAM6YDL077C POB3Q04636 552 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C ITT1Q04638 464 aa1.26□□□□□ -2.21
VAM6YDL077C YOR389WQ08912 624 aa1.26□□□□□ -2.21
VAM6YDL077C YBT1P32386 1661 aa1.26□□□□□ -2.21
VAM6YDL077C HAP1P0CE41 1502 aa1.26□□□□□ -2.21
VAM6YDL077C PDR12Q02785 1511 aa1.26□□□□□ -2.21
VAM6YDL077C PDR15Q04182 1529 aaKnown RBP1.26□□□□□ -2.21
VAM6YDL077C ULS1Q08562 1619 aa1.25□□□□□ -2.21
VAM6YDL077C TEC1P18412 486 aa1.25□□□□□ -2.21
VAM6YDL077C MEF1P25039 761 aa1.25□□□□□ -2.21
VAM6YDL077C DEP1P31385 405 aa1.25□□□□□ -2.21
VAM6YDL077C FBP26P32604 452 aa1.25□□□□□ -2.21
VAM6YDL077C PBY1P38254 753 aa1.25□□□□□ -2.21
VAM6YDL077C PEA2P40091 420 aa1.25□□□□□ -2.21
VAM6YDL077C PXA1P41909 870 aa1.25□□□□□ -2.21
VAM6YDL077C GPD2P41911 440 aaKnown RBP1.25□□□□□ -2.21
VAM6YDL077C YNR014WP53719 212 aa1.25□□□□□ -2.21
VAM6YDL077C CTR9P89105 1077 aa1.25□□□□□ -2.21
VAM6YDL077C MRS2Q01926 470 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms