RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W APC2Q12440 853 aa5.14□□□□□ -1.59
VHC1YBR235W JIP3O13555 125 aa5.14□□□□□ -1.59
VHC1YBR235W HXT5P38695 592 aa5.14□□□□□ -1.59
VHC1YBR235W AIM21P40563 679 aa5.14□□□□□ -1.59
VHC1YBR235W PUF6Q04373 656 aaKnown RBP5.14□□□□□ -1.59
VHC1YBR235W YDL073WQ07454 984 aa5.14□□□□□ -1.59
VHC1YBR235W KRS1P15180 591 aaKnown RBP5.13□□□□□ -1.59
VHC1YBR235W SSZ1P38788 538 aaKnown RBP5.13□□□□□ -1.59
VHC1YBR235W MVP1P40959 511 aaKnown RBP5.13□□□□□ -1.59
VHC1YBR235W CCM1P48237 864 aaPredicted RBP5.13□□□□□ -1.59
VHC1YBR235W RPP0P05317 312 aaKnown RBP5.13□□□□□ -1.59
VHC1YBR235W MET7Q08645 548 aa5.13□□□□□ -1.59
VHC1YBR235W CMP2P14747 604 aa5.13□□□□□ -1.59
VHC1YBR235W DAL7P21826 554 aa5.13□□□□□ -1.59
VHC1YBR235W MET4P32389 672 aa5.13□□□□□ -1.59
VHC1YBR235W KDX1P36005 433 aa5.13□□□□□ -1.59
VHC1YBR235W OSH3P38713 996 aaKnown RBP5.13□□□□□ -1.59
VHC1YBR235W MAD1P40957 749 aa5.13□□□□□ -1.59
VHC1YBR235W YIG1Q08956 461 aa5.13□□□□□ -1.59
VHC1YBR235W RUD3Q12234 484 aaKnown RBP5.13□□□□□ -1.59
VHC1YBR235W TFC8Q12308 588 aa5.13□□□□□ -1.59
VHC1YBR235W SMC6Q12749 1114 aa5.13□□□□□ -1.59
VHC1YBR235W YNL247WP53852 767 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W KRE33P53914 1056 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W YKU80Q04437 629 aa5.12□□□□□ -1.59
VHC1YBR235W SFH1Q06168 426 aa5.12□□□□□ -1.59
VHC1YBR235W SMD2Q06217 110 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W GNT1Q12096 491 aa5.12□□□□□ -1.59
VHC1YBR235W CAT8P39113 1433 aa5.12□□□□□ -1.59
VHC1YBR235W PDR1P12383 1068 aa5.12□□□□□ -1.59
VHC1YBR235W THR4P16120 514 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W RPC19P28000 142 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W ATG14P38270 344 aa5.12□□□□□ -1.59
VHC1YBR235W RSM25P40496 264 aa5.12□□□□□ -1.59
VHC1YBR235W RLP7P40693 322 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W GYP7P48365 746 aa5.12□□□□□ -1.59
VHC1YBR235W HST1P53685 503 aa5.12□□□□□ -1.59
VHC1YBR235W HEL2Q05580 639 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W YPR172WQ06608 200 aa5.12□□□□□ -1.59
VHC1YBR235W MET5P47169 1442 aa5.12□□□□□ -1.59
VHC1YBR235W YEF3P16521 1044 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W PET123P17558 318 aa5.12□□□□□ -1.59
VHC1YBR235W TPD3P31383 635 aa5.12□□□□□ -1.59
VHC1YBR235W NMD3P38861 518 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W SSP1P38871 571 aa5.12□□□□□ -1.59
VHC1YBR235W VTC3Q02725 835 aa5.12□□□□□ -1.59
VHC1YBR235W STE20Q03497 939 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W CHS5Q12114 671 aaKnown RBP5.12□□□□□ -1.59
VHC1YBR235W TRS33Q99394 268 aa5.12□□□□□ -1.59
VHC1YBR235W MAM1P40065 302 aa5.11□□□□□ -1.59
VHC1YBR235W NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
VHC1YBR235W YOR296WQ08748 1289 aa5.11□□□□□ -1.59
VHC1YBR235W PRI1P10363 409 aa5.11□□□□□ -1.59
VHC1YBR235W NPL6P32832 435 aa5.11□□□□□ -1.59
VHC1YBR235W MUM2P38236 366 aa5.11□□□□□ -1.59
VHC1YBR235W BDH2P39713 417 aa5.11□□□□□ -1.59
VHC1YBR235W CTH1P47976 325 aa5.11□□□□□ -1.59
VHC1YBR235W HOS2P53096 452 aaPredicted RBP5.11□□□□□ -1.59
VHC1YBR235W MGR3Q04472 501 aa5.11□□□□□ -1.59
VHC1YBR235W DPL1Q05567 589 aa5.11□□□□□ -1.59
VHC1YBR235W HIR3P47171 1648 aa5.1□□□□□ -1.59
VHC1YBR235W PSK1P31374 1356 aa5.1□□□□□ -1.59
VHC1YBR235W ECM32P32644 1121 aaKnown RBP5.1□□□□□ -1.59
VHC1YBR235W REI1P38344 393 aaPredicted RBP5.1□□□□□ -1.59
VHC1YBR235W SPT8P38915 602 aa5.1□□□□□ -1.59
VHC1YBR235W RAD17P48581 401 aa5.1□□□□□ -1.59
VHC1YBR235W FMS1P50264 508 aa5.1□□□□□ -1.59
VHC1YBR235W MON1P53129 644 aa5.1□□□□□ -1.59
VHC1YBR235W HRQ1Q05549 1077 aa5.1□□□□□ -1.59
VHC1YBR235W NUP60P39705 539 aa5.1□□□□□ -1.59
VHC1YBR235W ORM1P53224 222 aa5.1□□□□□ -1.59
VHC1YBR235W SGD1Q06132 899 aa5.1□□□□□ -1.59
VHC1YBR235W RSC2Q06488 889 aa5.1□□□□□ -1.59
VHC1YBR235W ATG13Q06628 738 aa5.1□□□□□ -1.59
VHC1YBR235W OMS1Q06668 471 aa5.1□□□□□ -1.59
VHC1YBR235W TY4A-HQ6Q5P6 413 aa5.1□□□□□ -1.59
VHC1YBR235W MPT5P39016 859 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
VHC1YBR235W BNI5P53890 448 aaKnown RBP5.1□□□□□ -1.59
VHC1YBR235W CUS1Q02554 436 aaPredicted RBP5.1□□□□□ -1.59
VHC1YBR235W RBA50Q04418 439 aa5.1□□□□□ -1.59
VHC1YBR235W NOP12Q08208 459 aaKnown RBP5.1□□□□□ -1.59
VHC1YBR235W PRP16P15938 1071 aaPredicted RBP5.09□□□□□ -1.59
VHC1YBR235W CLB4P24871 460 aa5.09□□□□□ -1.59
VHC1YBR235W CPS1P27614 576 aa5.09□□□□□ -1.59
VHC1YBR235W ASF1P32447 279 aa5.09□□□□□ -1.59
VHC1YBR235W DLD1P32891 587 aa5.09□□□□□ -1.59
VHC1YBR235W LHS1P36016 881 aa5.09□□□□□ -1.59
VHC1YBR235W YKR018CP36114 725 aa5.09□□□□□ -1.59
VHC1YBR235W RPL17BP46990 184 aaKnown RBP5.09□□□□□ -1.59
VHC1YBR235W INP2Q03824 705 aa5.09□□□□□ -1.59
VHC1YBR235W COG4Q06096 861 aa5.09□□□□□ -1.59
VHC1YBR235W TSR1Q07381 788 aaKnown RBP5.09□□□□□ -1.59
VHC1YBR235W BUD21Q08492 214 aaPredicted RBP5.09□□□□□ -1.59
VHC1YBR235W YOL098CQ12496 1037 aa5.09□□□□□ -1.59
VHC1YBR235W PRE10P21242 288 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
VHC1YBR235W YIL092WP40497 633 aa5.09□□□□□ -1.59
VHC1YBR235W SET2P46995 733 aaKnown RBP5.09□□□□□ -1.59
VHC1YBR235W SYF1Q04048 859 aaPredicted RBP5.09□□□□□ -1.59
VHC1YBR235W RSA3Q05942 220 aaKnown RBP5.09□□□□□ -1.59
VHC1YBR235W BDF2Q07442 638 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms