RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	ADR1	P07248	1323 aa		7.09	□□□□□ -1.27
ATG12	YBR217W	AI2	P03876	854 aa		7.09	□□□□□ -1.27
ATG12	YBR217W	SEC18	P18759	758 aa	Known RBP	7.09	□□□□□ -1.27
ATG12	YBR217W	STV1	P37296	890 aa		7.09	□□□□□ -1.27
ATG12	YBR217W	POL32	P47110	350 aa		7.09	□□□□□ -1.27
ATG12	YBR217W	TIM50	Q02776	476 aa		7.09	□□□□□ -1.27
ATG12	YBR217W	PRP42	Q03776	544 aa	Known RBP	7.09	□□□□□ -1.27
ATG12	YBR217W	GCD7	P32502	381 aa	Predicted RBP	7.08	□□□□□ -1.28
ATG12	YBR217W	RPT3	P33298	428 aa	Known RBP	7.08	□□□□□ -1.28
ATG12	YBR217W	NUG1	P40010	520 aa	Known RBP	7.08	□□□□□ -1.28
ATG12	YBR217W	VHR2	P40041	505 aa		7.08	□□□□□ -1.28
ATG12	YBR217W	YGR117C	P53270	476 aa		7.08	□□□□□ -1.28
ATG12	YBR217W	GYP5	Q12344	894 aa		7.08	□□□□□ -1.28
ATG12	YBR217W	FIG2	P25653	1609 aa		7.08	□□□□□ -1.28
ATG12	YBR217W	FLO11	P08640	1367 aa		7.08	□□□□□ -1.28
ATG12	YBR217W	POM152	P39685	1337 aa		7.07	□□□□□ -1.28
ATG12	YBR217W	HPR1	P17629	752 aa	Known RBP	7.07	□□□□□ -1.28
ATG12	YBR217W	RRD1	P40454	393 aa	Known RBP	7.07	□□□□□ -1.28
ATG12	YBR217W	YNL193W	P53870	558 aa		7.07	□□□□□ -1.28
ATG12	YBR217W	CRF1	Q04930	467 aa		7.07	□□□□□ -1.28
ATG12	YBR217W	ARG82	P07250	355 aa		7.06	□□□□□ -1.28
ATG12	YBR217W	RPS7A	P26786	190 aa	Known RBP	7.06	□□□□□ -1.28
ATG12	YBR217W	SSF1	P38789	453 aa	Predicted RBP	7.06	□□□□□ -1.28
ATG12	YBR217W	EMP47	P43555	445 aa		7.06	□□□□□ -1.28
ATG12	YBR217W	JJJ2	P46997	583 aa		7.06	□□□□□ -1.28
ATG12	YBR217W	SEN54	Q02825	467 aa	Predicted RBP	7.06	□□□□□ -1.28
ATG12	YBR217W	RPN7	Q06103	429 aa	Known RBP	7.06	□□□□□ -1.28
ATG12	YBR217W	WRS1	Q12109	432 aa	Known RBP	7.06	□□□□□ -1.28
ATG12	YBR217W	GSC2	P40989	1895 aa		7.06	□□□□□ -1.28
ATG12	YBR217W	GLO3	P38682	493 aa	Known RBP	7.05	□□□□□ -1.28
ATG12	YBR217W	HAL5	P38970	855 aa	Known RBP	7.05	□□□□□ -1.28
ATG12	YBR217W	YIR042C	P40586	236 aa		7.05	□□□□□ -1.28
ATG12	YBR217W	HGH1	P48362	394 aa	Known RBP	7.05	□□□□□ -1.28
ATG12	YBR217W	INM2	Q05533	292 aa		7.05	□□□□□ -1.28
ATG12	YBR217W	RRI2	Q12348	645 aa		7.05	□□□□□ -1.28
ATG12	YBR217W	CBP1	P07252	654 aa		7.04	□□□□□ -1.28
ATG12	YBR217W	KTR3	P38130	404 aa	Predicted RBP	7.04	□□□□□ -1.28
ATG12	YBR217W	YFH7	P43591	353 aa		7.04	□□□□□ -1.28
ATG12	YBR217W	NCB2	Q92317	146 aa		7.04	□□□□□ -1.28
ATG12	YBR217W	UTP7	P40055	554 aa	Known RBP	7.03	□□□□□ -1.28
ATG12	YBR217W	PEA2	P40091	420 aa		7.03	□□□□□ -1.28
ATG12	YBR217W	YIL089W	P40500	205 aa		7.03	□□□□□ -1.28
ATG12	YBR217W	MTC3	P53077	123 aa		7.03	□□□□□ -1.28
ATG12	YBR217W	PTK1	P36002	662 aa	Predicted RBP	7.02	□□□□□ -1.29
ATG12	YBR217W	NMD2	P38798	1089 aa	Known RBP	7.02	□□□□□ -1.29
ATG12	YBR217W	BDP1	P46678	594 aa		7.02	□□□□□ -1.29
ATG12	YBR217W	YGL242C	P53066	181 aa		7.02	□□□□□ -1.29
ATG12	YBR217W	CWC15	Q03772	175 aa	Known RBP	7.02	□□□□□ -1.29
ATG12	YBR217W	PSF3	Q12146	194 aa		7.02	□□□□□ -1.29
ATG12	YBR217W	PNT1	P38969	423 aa		7.01	□□□□□ -1.29
ATG12	YBR217W	YJL171C	P46992	396 aa		7.01	□□□□□ -1.29
ATG12	YBR217W	PUS6	P53294	404 aa		7.01	□□□□□ -1.29
ATG12	YBR217W	ACK1	Q07622	623 aa	Predicted RBP	7.01	□□□□□ -1.29
ATG12	YBR217W	RPL17A	P05740	184 aa	Known RBP	7	□□□□□ -1.29
ATG12	YBR217W	NOT3	P06102	836 aa	Known RBP	7	□□□□□ -1.29
ATG12	YBR217W	PIF1	P07271	859 aa		7	□□□□□ -1.29
ATG12	YBR217W	SIS1	P25294	352 aa	Known RBP	7	□□□□□ -1.29
ATG12	YBR217W	RPL17B	P46990	184 aa	Known RBP	7	□□□□□ -1.29
ATG12	YBR217W	ALO1	P54783	526 aa	Known RBP	7	□□□□□ -1.29
ATG12	YBR217W	SNF3	P10870	884 aa		6.99	□□□□□ -1.29
ATG12	YBR217W	MDL2	P33311	773 aa		6.99	□□□□□ -1.29
ATG12	YBR217W	GRX7	P38068	203 aa		6.99	□□□□□ -1.29
ATG12	YBR217W	MLC1	P53141	149 aa		6.99	□□□□□ -1.29
ATG12	YBR217W	NSG2	P53898	299 aa		6.99	□□□□□ -1.29
ATG12	YBR217W	RMD1	Q03441	430 aa		6.99	□□□□□ -1.29
ATG12	YBR217W	APL6	P46682	809 aa		6.98	□□□□□ -1.29
ATG12	YBR217W	PDR18	P53756	1333 aa		6.98	□□□□□ -1.29
ATG12	YBR217W	ECM21	P38167	1117 aa	Known RBP	6.97	□□□□□ -1.29
ATG12	YBR217W	RFC1	P38630	861 aa	Known RBP	6.97	□□□□□ -1.29
ATG12	YBR217W	ETP1	P38748	585 aa	Known RBP	6.97	□□□□□ -1.29
ATG12	YBR217W	NIT1	P40447	199 aa		6.97	□□□□□ -1.29
ATG12	YBR217W	PIB2	P53191	635 aa		6.97	□□□□□ -1.29
ATG12	YBR217W	BOI1	P38041	980 aa	Known RBP	6.96	□□□□□ -1.3
ATG12	YBR217W	FPR3	P38911	411 aa	Known RBP	6.96	□□□□□ -1.3
ATG12	YBR217W	EPS1	P40557	701 aa		6.96	□□□□□ -1.3
ATG12	YBR217W	CYB2	P00175	591 aa		6.95	□□□□□ -1.3
ATG12	YBR217W	KEL1	P38853	1164 aa	Known RBP	6.95	□□□□□ -1.3
ATG12	YBR217W	YMR147W	P40218	223 aa	Known RBP	6.95	□□□□□ -1.3
ATG12	YBR217W	PIP2	P52960	996 aa		6.95	□□□□□ -1.3
ATG12	YBR217W	DUS1	P53759	423 aa	Known RBP	6.95	□□□□□ -1.3
ATG12	YBR217W	TYW1	Q08960	810 aa	Known RBP	6.95	□□□□□ -1.3
ATG12	YBR217W	CSR2	Q12734	1121 aa		6.95	□□□□□ -1.3
ATG12	YBR217W	GAL2	P13181	574 aa		6.94	□□□□□ -1.3
ATG12	YBR217W	ADP1	P25371	1049 aa		6.94	□□□□□ -1.3
ATG12	YBR217W	PBY1	P38254	753 aa		6.94	□□□□□ -1.3
ATG12	YBR217W	MRPS35	P53292	345 aa		6.94	□□□□□ -1.3
ATG12	YBR217W	NKP2	Q06162	153 aa		6.94	□□□□□ -1.3
ATG12	YBR217W	FLO1	P32768	1537 aa		6.94	□□□□□ -1.3
ATG12	YBR217W	PMA1	P05030	918 aa	Known RBP	6.93	□□□□□ -1.3
ATG12	YBR217W	CDC16	P09798	840 aa		6.93	□□□□□ -1.3
ATG12	YBR217W	HVG1	P0CE11	249 aa		6.93	□□□□□ -1.3
ATG12	YBR217W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	6.93	□□□□□ -1.3	not detected
ATG12	YBR217W	RAD53	P22216	821 aa		6.93	□□□□□ -1.3
ATG12	YBR217W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	6.93	□□□□□ -1.3	not detected
ATG12	YBR217W	YBL028C	P38202	106 aa		6.93	□□□□□ -1.3
ATG12	YBR217W	RRT6	P53117	311 aa	Predicted RBP	6.93	□□□□□ -1.3
ATG12	YBR217W	PEX29	Q03370	554 aa		6.93	□□□□□ -1.3
ATG12	YBR217W	SPT21	P35209	758 aa		6.92	□□□□□ -1.3
ATG12	YBR217W	IRC8	P47046	822 aa		6.92	□□□□□ -1.3
ATG12	YBR217W	BRE1	Q07457	700 aa	Known RBP	6.92	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 9 ms