RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	NOC2	P39744	710 aa	Known RBP	4.9	□□□□□ -1.62
RPG1	YBR079C	FRK1	Q03002	865 aa	Predicted RBP	4.9	□□□□□ -1.62
RPG1	YBR079C	SRC1	Q03707	834 aa		4.9	□□□□□ -1.62
RPG1	YBR079C	ESF1	Q06344	628 aa	Known RBP	4.9	□□□□□ -1.62
RPG1	YBR079C	ELG1	Q12050	791 aa		4.9	□□□□□ -1.62
RPG1	YBR079C	URB1	P34241	1764 aa	Known RBP	4.9	□□□□□ -1.63
RPG1	YBR079C	QCR6	P00127	147 aa		4.9	□□□□□ -1.63
RPG1	YBR079C	MPE1	P35728	441 aa	Known RBP	4.9	□□□□□ -1.63
RPG1	YBR079C	MAL33	P38157	468 aa		4.9	□□□□□ -1.63
RPG1	YBR079C	BBC1	P47068	1157 aa		4.9	□□□□□ -1.63
RPG1	YBR079C	YBP2	P53169	641 aa		4.9	□□□□□ -1.63
RPG1	YBR079C	LTV1	P34078	463 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	ETT1	Q08421	412 aa	Known RBP	4.89	□□□□□ -1.63
RPG1	YBR079C	PSH1	Q12161	406 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	MSB4	Q12317	492 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	TAF13	P11747	167 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	TPM1	P17536	199 aa	Known RBP	4.89	□□□□□ -1.63
RPG1	YBR079C	YMR147W	P40218	223 aa	Known RBP	4.89	□□□□□ -1.63
RPG1	YBR079C	SPO22	P40511	975 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	EPL1	P43572	832 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	RMT2	Q03305	412 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	RPN7	Q06103	429 aa	Known RBP	4.89	□□□□□ -1.63
RPG1	YBR079C	DDP1	Q99321	188 aa	Known RBP	4.89	□□□□□ -1.63
RPG1	YBR079C	FKS3	Q04952	1785 aa		4.89	□□□□□ -1.63
RPG1	YBR079C	RRM3	P38766	723 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	EPS1	P40557	701 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	BUD6	P41697	788 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	CTH1	P47976	325 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	TUM1	Q08686	304 aa	Known RBP	4.88	□□□□□ -1.63
RPG1	YBR079C	SRP40	P32583	406 aa	Predicted RBP	4.88	□□□□□ -1.63
RPG1	YBR079C	PRP31	P49704	494 aa	Predicted RBP	4.88	□□□□□ -1.63
RPG1	YBR079C	YNL193W	P53870	558 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	WAR1	Q03631	944 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	ATG13	Q06628	738 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	YPR204W	Q08995	1032 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	YPL150W	Q12152	901 aa		4.88	□□□□□ -1.63
RPG1	YBR079C	TCD1	P38756	429 aa		4.87	□□□□□ -1.63
RPG1	YBR079C	YJR008W	P47085	338 aa		4.87	□□□□□ -1.63
RPG1	YBR079C	YKE2	P52553	114 aa		4.87	□□□□□ -1.63
RPG1	YBR079C	UTP13	Q05946	817 aa	Known RBP	4.87	□□□□□ -1.63
RPG1	YBR079C	NOP53	Q12080	455 aa	Known RBP	4.87	□□□□□ -1.63
RPG1	YBR079C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RPG1	YBR079C	YGL082W	P53155	381 aa		4.87	□□□□□ -1.63
RPG1	YBR079C	SEC18	P18759	758 aa	Known RBP	4.86	□□□□□ -1.63
RPG1	YBR079C	RRP43	P25359	394 aa	Predicted RBP	4.86	□□□□□ -1.63
RPG1	YBR079C	CLB5	P30283	435 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	FBP26	P32604	452 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	CEP3	P40969	608 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	YGR130C	P53278	816 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	UBP16	Q02863	499 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	PSK2	Q08217	1101 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	HSP82	P02829	709 aa	Known RBP	4.86	□□□□□ -1.63
RPG1	YBR079C	DCD1	P06773	312 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	HCA4	P20448	770 aa	Known RBP	4.86	□□□□□ -1.63
RPG1	YBR079C	CDC15	P27636	974 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	YHL017W	P38745	532 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	GYP5	Q12344	894 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	MATALPHA2	P0CY08	210 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	HMLALPHA2	P0CY09	210 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	ARG8	P18544	423 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	GSY2	P27472	705 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	YKL133C	P36066	463 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	PCH2	P38126	564 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	APL4	Q12028	832 aa		4.86	□□□□□ -1.63
RPG1	YBR079C	RGP1	P16664	663 aa		4.85	□□□□□ -1.63
RPG1	YBR079C	PET123	P17558	318 aa		4.85	□□□□□ -1.63
RPG1	YBR079C	PEP3	P27801	918 aa		4.85	□□□□□ -1.63
RPG1	YBR079C	MCM4	P30665	933 aa	Known RBP	4.85	□□□□□ -1.63
RPG1	YBR079C	SET1	P38827	1080 aa	Known RBP	4.85	□□□□□ -1.63
RPG1	YBR079C	YPT11	P48559	417 aa		4.85	□□□□□ -1.63
RPG1	YBR079C	SNU66	Q12420	587 aa	Predicted RBP	4.85	□□□□□ -1.63
RPG1	YBR079C	RSF2	P46974	1380 aa		4.85	□□□□□ -1.63
RPG1	YBR079C	MSH4	P40965	878 aa	Predicted RBP	4.85	□□□□□ -1.63
RPG1	YBR079C	SSP2	Q08646	371 aa		4.85	□□□□□ -1.63
RPG1	YBR079C	TMA16	Q08687	178 aa		4.85	□□□□□ -1.63
RPG1	YBR079C	PSY4	P38193	441 aa		4.84	□□□□□ -1.63
RPG1	YBR079C	CIN4	P39110	191 aa		4.84	□□□□□ -1.63
RPG1	YBR079C	IES2	P40154	320 aa		4.84	□□□□□ -1.63
RPG1	YBR079C	YLR271W	Q06152	274 aa		4.84	□□□□□ -1.63
RPG1	YBR079C	VPS60	Q03390	229 aa		4.84	□□□□□ -1.63
RPG1	YBR079C	YLR407W	Q06070	228 aa		4.84	□□□□□ -1.63
RPG1	YBR079C	RRI2	Q12348	645 aa		4.84	□□□□□ -1.63
RPG1	YBR079C	HXK1	P04806	485 aa	Known RBP	4.83	□□□□□ -1.64
RPG1	YBR079C	CDC27	P38042	758 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	RTT107	P38850	1070 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	PTP3	P40048	928 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	LAM4	P38800	1345 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	SER1	P33330	395 aa	Known RBP	4.83	□□□□□ -1.64
RPG1	YBR079C	SIS2	P36024	562 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	RRB1	Q04225	511 aa	Known RBP	4.83	□□□□□ -1.64
RPG1	YBR079C	COG4	Q06096	861 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	TLG2	Q08144	397 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	SUP35	P05453	685 aa	Known RBP	4.83	□□□□□ -1.64
RPG1	YBR079C	SAC6	P32599	642 aa	Known RBP	4.83	□□□□□ -1.64
RPG1	YBR079C	SMC3	P47037	1230 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	STR2	P47164	639 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	ENT1	Q12518	454 aa		4.83	□□□□□ -1.64
RPG1	YBR079C	NOP14	Q99207	810 aa	Known RBP	4.83	□□□□□ -1.64
RPG1	YBR079C	PDC1	P06169	563 aa	Known RBP	4.82	□□□□□ -1.64
RPG1	YBR079C	YKT6	P36015	200 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 42.3 ms