RNA–Protein interactions for RNA: YAR009C

YAR009C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YAR009C, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YAR009CYAR009C ISR1Q06098 443 aaKnown RBP2.3□□□□□ -2.04
YAR009CYAR009C MKS1P34072 584 aa2.3□□□□□ -2.04
YAR009CYAR009C RTT106P40161 455 aa2.3□□□□□ -2.04
YAR009CYAR009C APC1P53886 1748 aa2.3□□□□□ -2.04
YAR009CYAR009C AFT1P22149 690 aa2.3□□□□□ -2.04
YAR009CYAR009C FBP26P32604 452 aa2.29□□□□□ -2.04
YAR009CYAR009C PEP12P32854 288 aa2.29□□□□□ -2.04
YAR009CYAR009C YBL086CP38177 466 aa2.29□□□□□ -2.04
YAR009CYAR009C KTR7P40504 517 aa2.29□□□□□ -2.04
YAR009CYAR009C RPP2BP02400 110 aaKnown RBP2.29□□□□□ -2.04
YAR009CYAR009C MSB3P48566 633 aaPredicted RBP2.29□□□□□ -2.04
YAR009CYAR009C ISU1Q03020 165 aa2.29□□□□□ -2.04
YAR009CYAR009C BDS1Q08347 646 aa2.29□□□□□ -2.04
YAR009CYAR009C TGL4P36165 910 aa2.28□□□□□ -2.04
YAR009CYAR009C GCR2Q01722 534 aa2.28□□□□□ -2.04
YAR009CYAR009C DFG5Q05031 458 aa2.28□□□□□ -2.04
YAR009CYAR009C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.28□□□□□ -2.04not detected
YAR009CYAR009C SRF1Q12516 437 aa2.28□□□□□ -2.04
YAR009CYAR009C HAL5P38970 855 aaKnown RBP2.28□□□□□ -2.04
YAR009CYAR009C SRC1Q03707 834 aa2.28□□□□□ -2.04
YAR009CYAR009C HDA3Q06623 655 aa2.28□□□□□ -2.04
YAR009CYAR009C SUB2Q07478 446 aaKnown RBP2.28□□□□□ -2.04
YAR009CYAR009C NUP157P40064 1391 aaKnown RBP2.28□□□□□ -2.04
YAR009CYAR009C STE6P12866 1290 aa2.28□□□□□ -2.05
YAR009CYAR009C DAT1P13483 248 aaKnown RBP2.28□□□□□ -2.05
YAR009CYAR009C MIP1P15801 1254 aa2.28□□□□□ -2.05
YAR009CYAR009C YFL034WP43564 1073 aa2.28□□□□□ -2.05
YAR009CYAR009C GAL2P13181 574 aa2.27□□□□□ -2.05
YAR009CYAR009C UTR2P32623 467 aa2.27□□□□□ -2.05
YAR009CYAR009C TBS1P38114 1094 aa2.27□□□□□ -2.05
YAR009CYAR009C ECM23Q02710 187 aa2.27□□□□□ -2.05
YAR009CYAR009C TSC13Q99190 310 aa2.27□□□□□ -2.05
YAR009CYAR009C ARG82P07250 355 aa2.27□□□□□ -2.05
YAR009CYAR009C PDI1P17967 522 aaKnown RBP2.27□□□□□ -2.05
YAR009CYAR009C PUP1P25043 261 aa2.27□□□□□ -2.05
YAR009CYAR009C AIM9P40053 627 aaKnown RBP2.27□□□□□ -2.05
YAR009CYAR009C YJR115WP47152 169 aa2.27□□□□□ -2.05
YAR009CYAR009C SPT2P06843 333 aaPredicted RBP2.26□□□□□ -2.05
YAR009CYAR009C HAP4P14064 554 aa2.26□□□□□ -2.05
YAR009CYAR009C PHO87P25360 923 aa2.26□□□□□ -2.05
YAR009CYAR009C DLD3P39976 496 aaKnown RBP2.26□□□□□ -2.05
YAR009CYAR009C BRE2P43132 505 aa2.26□□□□□ -2.05
YAR009CYAR009C PTK2P47116 818 aaKnown RBP2.26□□□□□ -2.05
YAR009CYAR009C FIG2P25653 1609 aa2.26□□□□□ -2.05
YAR009CYAR009C SSA1P10591 642 aaKnown RBP2.26□□□□□ -2.05
YAR009CYAR009C MET10P39692 1035 aa2.26□□□□□ -2.05
YAR009CYAR009C AAD14P42884 376 aa2.26□□□□□ -2.05
YAR009CYAR009C ACS2P52910 683 aaKnown RBP2.26□□□□□ -2.05
YAR009CYAR009C NOB1Q08444 459 aaKnown RBP2.26□□□□□ -2.05
YAR009CYAR009C UBX7P38349 436 aa2.25□□□□□ -2.05
YAR009CYAR009C WTM2Q12206 467 aa2.25□□□□□ -2.05
YAR009CYAR009C SRB8P25648 1427 aa2.25□□□□□ -2.05
YAR009CYAR009C NTH2P35172 780 aa2.25□□□□□ -2.05
YAR009CYAR009C RPL34AP87262 121 aaPredicted RBP2.25□□□□□ -2.05
YAR009CYAR009C GAS4Q08271 471 aa2.25□□□□□ -2.05
YAR009CYAR009C SLX8P40072 274 aa2.25□□□□□ -2.05
YAR009CYAR009C NUP85P46673 744 aa2.25□□□□□ -2.05
YAR009CYAR009C YML083CQ04526 418 aa2.25□□□□□ -2.05
YAR009CYAR009C SWI5P08153 709 aa2.24□□□□□ -2.05
YAR009CYAR009C RPS6AP0CX37 236 aaKnown RBP2.24□□□□□ -2.05
YAR009CYAR009C RPS6BP0CX38 236 aaPredicted RBP2.24□□□□□ -2.05
YAR009CYAR009C ROM1P53046 1155 aa2.24□□□□□ -2.05
YAR009CYAR009C LSC2P53312 427 aa2.24□□□□□ -2.05
YAR009CYAR009C YLR346CQ06139 101 aa2.24□□□□□ -2.05
YAR009CYAR009C VAN1P23642 535 aa2.24□□□□□ -2.05
YAR009CYAR009C DLD1P32891 587 aa2.24□□□□□ -2.05
YAR009CYAR009C UTP7P40055 554 aaKnown RBP2.24□□□□□ -2.05
YAR009CYAR009C GEF1P37020 779 aa2.23□□□□□ -2.05
YAR009CYAR009C ALA1P40825 983 aaKnown RBP2.23□□□□□ -2.05
YAR009CYAR009C SUM1P46676 1062 aa2.23□□□□□ -2.05
YAR009CYAR009C CYT1P07143 309 aa2.23□□□□□ -2.05
YAR009CYAR009C PUF6Q04373 656 aaKnown RBP2.23□□□□□ -2.05
YAR009CYAR009C YJR098CP47139 656 aa2.23□□□□□ -2.05
YAR009CYAR009C UBP2Q01476 1272 aa2.23□□□□□ -2.05
YAR009CYAR009C TRS33Q99394 268 aa2.23□□□□□ -2.05
YAR009CYAR009C UBP1P25037 809 aa2.22□□□□□ -2.05
YAR009CYAR009C MSN5P52918 1224 aa2.22□□□□□ -2.05
YAR009CYAR009C CWH41P53008 833 aa2.22□□□□□ -2.05
YAR009CYAR009C YDR444WQ04093 687 aa2.22□□□□□ -2.05
YAR009CYAR009C OPT2Q06593 877 aa2.22□□□□□ -2.05
YAR009CYAR009C TCB1Q12466 1186 aa2.22□□□□□ -2.05
YAR009CYAR009C MET22P32179 357 aa2.21□□□□□ -2.05
YAR009CYAR009C AHP1P38013 176 aaKnown RBP2.21□□□□□ -2.05
YAR009CYAR009C PUN1Q06991 263 aa2.21□□□□□ -2.05
YAR009CYAR009C NGR1P32831 672 aaKnown RBP2.21□□□□□ -2.06
YAR009CYAR009C SSN3P39073 555 aa2.21□□□□□ -2.06
YAR009CYAR009C VTC4P47075 721 aa2.21□□□□□ -2.06
YAR009CYAR009C MCM1P11746 286 aa2.21□□□□□ -2.06
YAR009CYAR009C DAL1P32375 460 aa2.21□□□□□ -2.06
YAR009CYAR009C YPQ2Q06328 317 aa2.21□□□□□ -2.06
YAR009CYAR009C SCW11P53189 542 aa2.2□□□□□ -2.06
YAR009CYAR009C CWC15Q03772 175 aaKnown RBP2.2□□□□□ -2.06
YAR009CYAR009C LCB5Q06147 687 aaKnown RBP2.2□□□□□ -2.06
YAR009CYAR009C SRS2P12954 1174 aa2.2□□□□□ -2.06
YAR009CYAR009C CDC3P32457 520 aaKnown RBP2.2□□□□□ -2.06
YAR009CYAR009C GLY1P37303 387 aaKnown RBP2.2□□□□□ -2.06
YAR009CYAR009C GAR1P28007 205 aaKnown RBP2.2□□□□□ -2.06
YAR009CYAR009C ALD4P46367 519 aaKnown RBP2.2□□□□□ -2.06
YAR009CYAR009C JJJ2P46997 583 aa2.2□□□□□ -2.06
YAR009CYAR009C PNP1Q05788 311 aa2.2□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms