RNA–Protein interactions for RNA: YAR007C

RFA1, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA1, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA1YAR007C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
RFA1YAR007C RNT1Q02555 471 aa6.33□□□□□ -1.4
RFA1YAR007C RPO41P13433 1351 aaKnown RBP6.33□□□□□ -1.4
RFA1YAR007C RPS19AP07280 144 aaKnown RBP6.32□□□□□ -1.4
RFA1YAR007C RPS19BP07281 144 aaPredicted RBP6.32□□□□□ -1.4
RFA1YAR007C TAF13P11747 167 aa6.32□□□□□ -1.4
RFA1YAR007C FRS2P15625 503 aaKnown RBP6.32□□□□□ -1.4
RFA1YAR007C CCT5P40413 562 aaKnown RBP6.32□□□□□ -1.4
RFA1YAR007C NMA111P53920 997 aa6.32□□□□□ -1.4
RFA1YAR007C BMS1Q08965 1183 aaKnown RBP6.32□□□□□ -1.4
RFA1YAR007C TRS33Q99394 268 aa6.32□□□□□ -1.4
RFA1YAR007C APC1P53886 1748 aa6.32□□□□□ -1.4
RFA1YAR007C LEU2P04173 364 aaPredicted RBP6.32□□□□□ -1.4
RFA1YAR007C ATE1P16639 503 aa6.32□□□□□ -1.4
RFA1YAR007C MBR1P23493 339 aa6.32□□□□□ -1.4
RFA1YAR007C AKL1P38080 1108 aaKnown RBP6.32□□□□□ -1.4
RFA1YAR007C PRP31P49704 494 aaPredicted RBP6.32□□□□□ -1.4
RFA1YAR007C YGL140CP53120 1219 aa6.32□□□□□ -1.4
RFA1YAR007C YGL082WP53155 381 aa6.32□□□□□ -1.4
RFA1YAR007C MRS2Q01926 470 aa6.32□□□□□ -1.4
RFA1YAR007C UBP14P38237 781 aaKnown RBP6.31□□□□□ -1.4
RFA1YAR007C ZDS1P50111 915 aaKnown RBP6.31□□□□□ -1.4
RFA1YAR007C BNI4P53858 892 aa6.31□□□□□ -1.4
RFA1YAR007C SML1Q04964 104 aa6.31□□□□□ -1.4
RFA1YAR007C GAS4Q08271 471 aa6.31□□□□□ -1.4
RFA1YAR007C ELM1P32801 640 aa6.3□□□□□ -1.4
RFA1YAR007C YNL050CP53952 270 aa6.3□□□□□ -1.4
RFA1YAR007C YMR102CQ03177 834 aa6.3□□□□□ -1.4
RFA1YAR007C DPL1Q05567 589 aa6.3□□□□□ -1.4
RFA1YAR007C RPL19AP0CX82 189 aaKnown RBP6.3□□□□□ -1.4
RFA1YAR007C RPL19BP0CX83 189 aaPredicted RBP6.3□□□□□ -1.4
RFA1YAR007C BDP1P46678 594 aa6.3□□□□□ -1.4
RFA1YAR007C YGR122WP53272 402 aa6.3□□□□□ -1.4
RFA1YAR007C SGD1Q06132 899 aa6.3□□□□□ -1.4
RFA1YAR007C YLR326WQ06170 240 aaKnown RBP6.3□□□□□ -1.4
RFA1YAR007C TLG2Q08144 397 aa6.3□□□□□ -1.4
RFA1YAR007C YOL087CQ99247 1116 aa6.3□□□□□ -1.4
RFA1YAR007C MRC1P25588 1096 aa6.29□□□□□ -1.4
RFA1YAR007C RAD24P32641 659 aa6.29□□□□□ -1.4
RFA1YAR007C VHR2P40041 505 aa6.29□□□□□ -1.4
RFA1YAR007C YKL068W-AQ3E826 78 aa6.29□□□□□ -1.4
RFA1YAR007C PRX1P34227 261 aaKnown RBP6.28□□□□□ -1.4
RFA1YAR007C GDT1P38301 280 aaPredicted RBP6.28□□□□□ -1.4
RFA1YAR007C RTT107P38850 1070 aa6.28□□□□□ -1.4
RFA1YAR007C VPS41P38959 992 aa6.28□□□□□ -1.4
RFA1YAR007C MAM1P40065 302 aa6.28□□□□□ -1.4
RFA1YAR007C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
RFA1YAR007C CTH1P47976 325 aa6.28□□□□□ -1.4
RFA1YAR007C CTI6Q08923 506 aa6.28□□□□□ -1.4
RFA1YAR007C MSH1P25846 959 aa6.28□□□□□ -1.4
RFA1YAR007C GCD7P32502 381 aaPredicted RBP6.28□□□□□ -1.4
RFA1YAR007C SIC1P38634 284 aa6.28□□□□□ -1.4
RFA1YAR007C MTR4P47047 1073 aaKnown RBP6.28□□□□□ -1.4
RFA1YAR007C PEX14P53112 341 aa6.28□□□□□ -1.4
RFA1YAR007C YML082WQ04533 649 aaKnown RBP6.28□□□□□ -1.4
RFA1YAR007C PTC2P39966 464 aaKnown RBP6.27□□□□□ -1.41
RFA1YAR007C RMD1Q03441 430 aa6.27□□□□□ -1.41
RFA1YAR007C SRC1Q03707 834 aa6.27□□□□□ -1.41
RFA1YAR007C RPN7Q06103 429 aaKnown RBP6.27□□□□□ -1.41
RFA1YAR007C CDC73Q06697 393 aa6.27□□□□□ -1.41
RFA1YAR007C ETT1Q08421 412 aaKnown RBP6.27□□□□□ -1.41
RFA1YAR007C DPS1P04802 557 aaKnown RBP6.26□□□□□ -1.41
RFA1YAR007C NTH2P35172 780 aa6.26□□□□□ -1.41
RFA1YAR007C TTI1P36097 1038 aa6.26□□□□□ -1.41
RFA1YAR007C AIM9P40053 627 aaKnown RBP6.26□□□□□ -1.41
RFA1YAR007C CTF18P49956 741 aa6.26□□□□□ -1.41
RFA1YAR007C COG4Q06096 861 aa6.26□□□□□ -1.41
RFA1YAR007C COQ4O13525 335 aa6.26□□□□□ -1.41
RFA1YAR007C RPS24AP0CX31 135 aaKnown RBP6.26□□□□□ -1.41
RFA1YAR007C RPS24BP0CX32 135 aaKnown RBP6.26□□□□□ -1.41
RFA1YAR007C PCS60P38137 543 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
RFA1YAR007C OSW7P43611 510 aa6.26□□□□□ -1.41
RFA1YAR007C ENT3P47160 408 aa6.26□□□□□ -1.41
RFA1YAR007C GYL1Q04322 720 aa6.26□□□□□ -1.41
RFA1YAR007C YRF1-2P40105 1681 aa6.25□□□□□ -1.41
RFA1YAR007C PET111P08468 800 aa6.25□□□□□ -1.41
RFA1YAR007C MSH3P25336 1018 aa6.25□□□□□ -1.41
RFA1YAR007C AAP1P37898 856 aaKnown RBP6.25□□□□□ -1.41
RFA1YAR007C FYV10P40492 516 aa6.25□□□□□ -1.41
RFA1YAR007C PRP3Q03338 469 aaPredicted RBP6.25□□□□□ -1.41
RFA1YAR007C NOP8Q08287 484 aaPredicted RBP6.25□□□□□ -1.41
RFA1YAR007C DDP1Q99321 188 aaKnown RBP6.25□□□□□ -1.41
RFA1YAR007C CPA2P03965 1118 aaKnown RBP6.24□□□□□ -1.41
RFA1YAR007C CPS1P27614 576 aa6.24□□□□□ -1.41
RFA1YAR007C SWC3P31376 625 aa6.24□□□□□ -1.41
RFA1YAR007C VMS1Q04311 632 aaKnown RBP6.24□□□□□ -1.41
RFA1YAR007C RRP5Q05022 1729 aaKnown RBP6.24□□□□□ -1.41
RFA1YAR007C RIM20Q12033 661 aa6.24□□□□□ -1.41
RFA1YAR007C GIN4Q12263 1142 aa6.24□□□□□ -1.41
RFA1YAR007C GPA1P08539 472 aa6.24□□□□□ -1.41
RFA1YAR007C RDS1P25611 832 aa6.24□□□□□ -1.41
RFA1YAR007C MVP1P40959 511 aaKnown RBP6.24□□□□□ -1.41
RFA1YAR007C RIA1P53893 1110 aa6.24□□□□□ -1.41
RFA1YAR007C PSH1Q12161 406 aa6.24□□□□□ -1.41
RFA1YAR007C PSE1P32337 1089 aaKnown RBP6.23□□□□□ -1.41
RFA1YAR007C YER130CP39959 443 aa6.23□□□□□ -1.41
RFA1YAR007C MSH4P40965 878 aaPredicted RBP6.23□□□□□ -1.41
RFA1YAR007C ARP5P53946 755 aa6.23□□□□□ -1.41
RFA1YAR007C ISU2Q12056 156 aa6.23□□□□□ -1.41
RFA1YAR007C YPR015CQ12531 247 aa6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms