RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W JIP5Q06214 492 aaPredicted RBP3.01□□□□□ -1.93
SNC1YAL030W BDS1Q08347 646 aa3.01□□□□□ -1.93
SNC1YAL030W GAR1P28007 205 aaKnown RBP3□□□□□ -1.93
SNC1YAL030W ASH1P34233 588 aa3□□□□□ -1.93
SNC1YAL030W DYS1P38791 387 aa3□□□□□ -1.93
SNC1YAL030W BRE2P43132 505 aa3□□□□□ -1.93
SNC1YAL030W DAK2P43550 591 aa3□□□□□ -1.93
SNC1YAL030W YJL049WP47048 450 aa3□□□□□ -1.93
SNC1YAL030W YGR122WP53272 402 aa3□□□□□ -1.93
SNC1YAL030W VPS16Q03308 798 aa3□□□□□ -1.93
SNC1YAL030W MAG2Q06436 670 aaKnown RBP3□□□□□ -1.93
SNC1YAL030W PIN2Q12057 282 aa3□□□□□ -1.93
SNC1YAL030W VMA3P25515 160 aa2.99□□□□□ -1.93
SNC1YAL030W LDH1P38139 375 aa2.99□□□□□ -1.93
SNC1YAL030W NTA1P40354 457 aa2.99□□□□□ -1.93
SNC1YAL030W SUT1P53032 299 aaKnown RBP2.99□□□□□ -1.93
SNC1YAL030W SPR28Q04921 423 aa2.99□□□□□ -1.93
SNC1YAL030W BSC2Q05611 235 aa2.99□□□□□ -1.93
SNC1YAL030W NOC3Q07896 663 aaPredicted RBP2.99□□□□□ -1.93
SNC1YAL030W OXR1Q08952 273 aa2.99□□□□□ -1.93
SNC1YAL030W HXK1P04806 485 aaKnown RBP2.98□□□□□ -1.93
SNC1YAL030W CYC8P14922 966 aa2.98□□□□□ -1.93
SNC1YAL030W IRS4P36115 615 aaKnown RBP2.98□□□□□ -1.93
SNC1YAL030W YBR287WP38355 427 aa2.98□□□□□ -1.93
SNC1YAL030W NMD2P38798 1089 aaKnown RBP2.98□□□□□ -1.93
SNC1YAL030W RAD55P38953 406 aa2.98□□□□□ -1.93
SNC1YAL030W UTP7P40055 554 aaKnown RBP2.98□□□□□ -1.93
SNC1YAL030W MAD1P40957 749 aa2.98□□□□□ -1.93
SNC1YAL030W MSN5P52918 1224 aa2.98□□□□□ -1.93
SNC1YAL030W YOL098CQ12496 1037 aa2.98□□□□□ -1.93
SNC1YAL030W MCM2P29469 868 aa2.97□□□□□ -1.93
SNC1YAL030W BRN1P38170 754 aa2.97□□□□□ -1.93
SNC1YAL030W JJJ2P46997 583 aa2.97□□□□□ -1.93
SNC1YAL030W MSB3P48566 633 aaPredicted RBP2.97□□□□□ -1.93
SNC1YAL030W MET32Q12041 191 aa2.97□□□□□ -1.93
SNC1YAL030W SSF2Q12153 453 aaPredicted RBP2.97□□□□□ -1.93
SNC1YAL030W MCD1Q12158 566 aa2.97□□□□□ -1.93
SNC1YAL030W RAD2P07276 1031 aa2.96□□□□□ -1.94
SNC1YAL030W KAR2P16474 682 aaKnown RBP2.96□□□□□ -1.94
SNC1YAL030W RPC31P17890 251 aa2.96□□□□□ -1.94
SNC1YAL030W MSN1P22148 382 aa2.96□□□□□ -1.94
SNC1YAL030W UGA3P26370 528 aa2.96□□□□□ -1.94
SNC1YAL030W MLF3P32047 452 aa2.96□□□□□ -1.94
SNC1YAL030W PET112P33893 541 aa2.96□□□□□ -1.94
SNC1YAL030W ISW1P38144 1129 aa2.96□□□□□ -1.94
SNC1YAL030W SSN3P39073 555 aa2.96□□□□□ -1.94
SNC1YAL030W RPS26AP39938 119 aaKnown RBP2.96□□□□□ -1.94
SNC1YAL030W RPS26BP39939 119 aaKnown RBP2.96□□□□□ -1.94
SNC1YAL030W VAC8P39968 578 aa2.96□□□□□ -1.94
SNC1YAL030W FIR1P40020 876 aa2.96□□□□□ -1.94
SNC1YAL030W PSY2P40164 858 aa2.96□□□□□ -1.94
SNC1YAL030W YTA6P40328 754 aa2.96□□□□□ -1.94
SNC1YAL030W QDR2P40474 542 aa2.96□□□□□ -1.94
SNC1YAL030W AAD14P42884 376 aa2.96□□□□□ -1.94
SNC1YAL030W RGD2P43556 714 aa2.96□□□□□ -1.94
SNC1YAL030W VTC4P47075 721 aa2.96□□□□□ -1.94
SNC1YAL030W YNL165WP53891 406 aa2.96□□□□□ -1.94
SNC1YAL030W YAF9P53930 226 aa2.96□□□□□ -1.94
SNC1YAL030W ALD3P54114 506 aa2.96□□□□□ -1.94
SNC1YAL030W ALD6P54115 500 aaKnown RBP2.96□□□□□ -1.94
SNC1YAL030W MSH6Q03834 1242 aa2.96□□□□□ -1.94
SNC1YAL030W IOC4Q04213 475 aa2.96□□□□□ -1.94
SNC1YAL030W YOR296WQ08748 1289 aa2.96□□□□□ -1.94
SNC1YAL030W SRF1Q12516 437 aa2.96□□□□□ -1.94
SNC1YAL030W Q0182Q9ZZW1 134 aa2.96□□□□□ -1.94
SNC1YAL030W FLP1P03870 423 aa2.95□□□□□ -1.94
SNC1YAL030W ARG82P07250 355 aa2.95□□□□□ -1.94
SNC1YAL030W AFT1P22149 690 aa2.95□□□□□ -1.94
SNC1YAL030W PEP7P32609 515 aa2.95□□□□□ -1.94
SNC1YAL030W SPC42P36094 363 aa2.95□□□□□ -1.94
SNC1YAL030W SHM1P37292 490 aaPredicted RBP2.95□□□□□ -1.94
SNC1YAL030W GIP1P38229 639 aa2.95□□□□□ -1.94
SNC1YAL030W FAA3P39002 694 aa2.95□□□□□ -1.94
SNC1YAL030W ALA1P40825 983 aaKnown RBP2.95□□□□□ -1.94
SNC1YAL030W OSW7P43611 510 aa2.95□□□□□ -1.94
SNC1YAL030W YCS4Q06156 1176 aa2.95□□□□□ -1.94
SNC1YAL030W TIF6Q12522 245 aaKnown RBP2.95□□□□□ -1.94
SNC1YAL030W RPS31P05759 152 aaKnown RBP2.94□□□□□ -1.94
SNC1YAL030W LEU1P07264 779 aaKnown RBP2.94□□□□□ -1.94
SNC1YAL030W CDC34P14682 295 aa2.94□□□□□ -1.94
SNC1YAL030W STI1P15705 589 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SNC1YAL030W PRE9P23638 258 aaKnown RBP2.94□□□□□ -1.94
SNC1YAL030W KAP122P32767 1081 aa2.94□□□□□ -1.94
SNC1YAL030W PRP40P33203 583 aaKnown RBP2.94□□□□□ -1.94
SNC1YAL030W AHP1P38013 176 aaKnown RBP2.94□□□□□ -1.94
SNC1YAL030W MRPS18P42847 217 aa2.94□□□□□ -1.94
SNC1YAL030W YJR115WP47152 169 aa2.94□□□□□ -1.94
SNC1YAL030W SKP1P52286 194 aa2.94□□□□□ -1.94
SNC1YAL030W YPL109CQ02981 657 aa2.94□□□□□ -1.94
SNC1YAL030W RPN4Q03465 531 aa2.94□□□□□ -1.94
SNC1YAL030W NSE3Q05541 303 aa2.94□□□□□ -1.94
SNC1YAL030W TOS4Q06266 489 aa2.94□□□□□ -1.94
SNC1YAL030W INP54Q08227 384 aaKnown RBP2.94□□□□□ -1.94
SNC1YAL030W MET22P32179 357 aa2.93□□□□□ -1.94
SNC1YAL030W IRE1P32361 1115 aa2.93□□□□□ -1.94
SNC1YAL030W DAL1P32375 460 aa2.93□□□□□ -1.94
SNC1YAL030W SLA1P32790 1244 aa2.93□□□□□ -1.94
SNC1YAL030W RRP14P36080 434 aaKnown RBP2.93□□□□□ -1.94
SNC1YAL030W BSD2P38356 321 aa2.93□□□□□ -1.94
SNC1YAL030W YHL008CP38750 627 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms