RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
SPIN3-236ENST00000640131 CAMSAP1Q5T5Y3 1602 aa16.11■□□□□ 0.17
SPIN3-236ENST00000640131 C14orf93Q9H972 538 aaKnown RBP16.1■□□□□ 0.17
SPIN3-236ENST00000640131 PLEKHH1Q9ULM0 1364 aa16.1■□□□□ 0.17
SPIN3-236ENST00000640131 RNF123Q5XPI4 1314 aa16.1■□□□□ 0.17
SPIN3-236ENST00000640131 NEUROD2Q15784 382 aa16.1■□□□□ 0.17
SPIN3-236ENST00000640131 SKAP1Q86WV1 359 aa16.1■□□□□ 0.17
SPIN3-236ENST00000640131 LMTK2Q8IWU2 1503 aa16.09■□□□□ 0.17
SPIN3-236ENST00000640131 PPLO60437 1756 aa16.09■□□□□ 0.17
SPIN3-236ENST00000640131 APAF1O14727 1248 aa16.08■□□□□ 0.17
SPIN3-236ENST00000640131 STAG3Q9UJ98 1225 aa16.08■□□□□ 0.17
SPIN3-236ENST00000640131 NEO1Q92859 1461 aa16.08■□□□□ 0.16
SPIN3-236ENST00000640131 BLMP54132 1417 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-236ENST00000640131 KIAA1210Q9ULL0 1709 aa16.08■□□□□ 0.16
SPIN3-236ENST00000640131 PIK3C2GO75747 1445 aa16.08■□□□□ 0.16
SPIN3-236ENST00000640131 MYO5BQ9ULV0 1848 aa16.08■□□□□ 0.16
SPIN3-236ENST00000640131 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-236ENST00000640131 RICTORQ6R327 1708 aa16.07■□□□□ 0.16
SPIN3-236ENST00000640131 TAF7LQ5H9L4 462 aa16.07■□□□□ 0.16
SPIN3-236ENST00000640131 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
SPIN3-236ENST00000640131 NSD3Q9BZ95 1437 aa16.07■□□□□ 0.16
SPIN3-236ENST00000640131 KLHL34Q8N239 644 aa16.07■□□□□ 0.16
SPIN3-236ENST00000640131 RRP7AQ9Y3A4 280 aaKnown RBP16.06■□□□□ 0.16
SPIN3-236ENST00000640131 MORC1Q86VD1 984 aa16.06■□□□□ 0.16
SPIN3-236ENST00000640131 MINK1Q8N4C8 1332 aaPredicted RBP16.06■□□□□ 0.16
SPIN3-236ENST00000640131 QRICH2Q9H0J4 1663 aa16.05■□□□□ 0.16
SPIN3-236ENST00000640131 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
SPIN3-236ENST00000640131 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-236ENST00000640131 RIMBP3CA6NJZ7 1639 aa16.04■□□□□ 0.16
SPIN3-236ENST00000640131 RIMBP3BA6NNM3 1639 aa16.04■□□□□ 0.16
SPIN3-236ENST00000640131 RIMBP3Q9UFD9 1639 aa16.04■□□□□ 0.16
SPIN3-236ENST00000640131 VGFO15240 615 aaPredicted RBP16.04■□□□□ 0.16
SPIN3-236ENST00000640131 NPM2Q86SE8 214 aaKnown RBP16.04■□□□□ 0.16
SPIN3-236ENST00000640131 SRPK2P78362 688 aaKnown RBP16.04■□□□□ 0.16
SPIN3-236ENST00000640131 PDE3BQ13370 1112 aa16.04■□□□□ 0.16
SPIN3-236ENST00000640131 CRBNQ96SW2 442 aa16.04■□□□□ 0.16
SPIN3-236ENST00000640131 DMRT2Q9Y5R5 561 aa16.04■□□□□ 0.16
SPIN3-236ENST00000640131 NRXN1Q9ULB1 1477 aa16.04■□□□□ 0.16
SPIN3-236ENST00000640131 RRAGDQ9NQL2 400 aaPredicted RBP16.02■□□□□ 0.15
SPIN3-236ENST00000640131 ADGRB1O14514 1584 aa16.02■□□□□ 0.15
SPIN3-236ENST00000640131 ZMYM4Q5VZL5 1548 aa16.01■□□□□ 0.15
SPIN3-236ENST00000640131 GLI2P10070 1586 aa16.01■□□□□ 0.15
SPIN3-236ENST00000640131 GOLGA2Q08379 1002 aa16■□□□□ 0.15
SPIN3-236ENST00000640131 PRAM1Q96QH2 718 aa16■□□□□ 0.15
SPIN3-236ENST00000640131 PRDM4Q9UKN5 801 aa16■□□□□ 0.15
SPIN3-236ENST00000640131 NEXMIFQ5QGS0 1516 aa16■□□□□ 0.15
SPIN3-236ENST00000640131 DUSP27Q5VZP5 1158 aa15.99■□□□□ 0.15
SPIN3-236ENST00000640131 POGKQ9P215 609 aa15.99■□□□□ 0.15
SPIN3-236ENST00000640131 PIK3C2BO00750 1634 aa15.99■□□□□ 0.15
SPIN3-236ENST00000640131 NEURL4Q96JN8 1562 aa15.99■□□□□ 0.15
SPIN3-236ENST00000640131 RPGRIP1LQ68CZ1 1315 aa15.98■□□□□ 0.15
SPIN3-236ENST00000640131 RGS3P49796 1198 aa15.98■□□□□ 0.15
SPIN3-236ENST00000640131 MTHFSP49914 203 aa15.98■□□□□ 0.15
SPIN3-236ENST00000640131 GGNBP2Q9H3C7 697 aa15.98■□□□□ 0.15
SPIN3-236ENST00000640131 EVC2Q86UK5 1308 aa15.97■□□□□ 0.15
SPIN3-236ENST00000640131 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.14
SPIN3-236ENST00000640131 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
SPIN3-236ENST00000640131 NFKBIBQ15653 356 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 MYO3AQ8NEV4 1616 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 ZC3H13Q5T200 1668 aaKnown RBP15.95■□□□□ 0.14
SPIN3-236ENST00000640131 BCAR3O75815 825 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 WAPLQ7Z5K2 1190 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 PREX1Q8TCU6 1659 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 DIP2BQ9P265 1576 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 FBLN1P23142 703 aa15.95■□□□□ 0.14
SPIN3-236ENST00000640131 ARHGEF28Q8N1W1 1705 aaKnown RBP15.94■□□□□ 0.14
SPIN3-236ENST00000640131 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
SPIN3-236ENST00000640131 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
SPIN3-236ENST00000640131 NAP1L2Q9ULW6 460 aaPredicted RBP15.93■□□□□ 0.14
SPIN3-236ENST00000640131 SBNO2Q9Y2G9 1366 aa15.93■□□□□ 0.14
SPIN3-236ENST00000640131 SLFN5Q08AF3 891 aa15.92■□□□□ 0.14
SPIN3-236ENST00000640131 BBXQ8WY36 941 aaPredicted RBP15.92■□□□□ 0.14
SPIN3-236ENST00000640131 CGNL1Q0VF96 1302 aa15.92■□□□□ 0.14
SPIN3-236ENST00000640131 ZNF521Q96K83 1311 aa15.92■□□□□ 0.14
SPIN3-236ENST00000640131 NPC1L1Q9UHC9 1359 aa15.92■□□□□ 0.14
SPIN3-236ENST00000640131 U2SURPO15042 1029 aaKnown RBP15.91■□□□□ 0.14
SPIN3-236ENST00000640131 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
SPIN3-236ENST00000640131 CLTCQ00610 1675 aaKnown RBP15.91■□□□□ 0.14
SPIN3-236ENST00000640131 U2AF1L5P0DN76 240 aaPredicted RBP15.91■□□□□ 0.14
SPIN3-236ENST00000640131 U2AF1Q01081 240 aaKnown RBP eCLIP15.91■□□□□ 0.14
SPIN3-236ENST00000640131 BCL2L13Q9BXK5 485 aa15.91■□□□□ 0.14
SPIN3-236ENST00000640131 PAXIP1Q6ZW49 1069 aaPredicted RBP15.9■□□□□ 0.14
SPIN3-236ENST00000640131 ESF1Q9H501 851 aaKnown RBP15.9■□□□□ 0.14
SPIN3-236ENST00000640131 A0A1W2PP64 1363 aa15.9■□□□□ 0.14
SPIN3-236ENST00000640131 TMEM131LA2VDJ0 1609 aa15.9■□□□□ 0.14
SPIN3-236ENST00000640131 ARHGAP31Q2M1Z3 1444 aa15.89■□□□□ 0.13
SPIN3-236ENST00000640131 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
SPIN3-236ENST00000640131 CABP1Q9NZU7 370 aa15.88■□□□□ 0.13
SPIN3-236ENST00000640131 WWC1Q8IX03 1113 aa15.88■□□□□ 0.13
SPIN3-236ENST00000640131 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
SPIN3-236ENST00000640131 CHMP4BQ9H444 224 aaKnown RBP15.87■□□□□ 0.13
SPIN3-236ENST00000640131 YTHDC2Q9H6S0 1430 aaKnown RBP15.87■□□□□ 0.13
SPIN3-236ENST00000640131 NCKAP5LQ9HCH0 1330 aa15.87■□□□□ 0.13
SPIN3-236ENST00000640131 NUTM2FA1L443 756 aa15.86■□□□□ 0.13
SPIN3-236ENST00000640131 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
SPIN3-236ENST00000640131 ANKRD36BQ8N2N9 1353 aa15.86■□□□□ 0.13
SPIN3-236ENST00000640131 CFAP53Q96M91 514 aa15.85■□□□□ 0.13
SPIN3-236ENST00000640131 POLR3AO14802 1390 aaPredicted RBP15.85■□□□□ 0.13
SPIN3-236ENST00000640131 TXNDC2Q86VQ3 553 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 262.4 ms