RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 SBNO2Q9Y2G9 1366 aa12.62□□□□□ -0.39
HNRNPU-218ENST00000639064 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
HNRNPU-218ENST00000639064 TECPR2O15040 1411 aa12.62□□□□□ -0.39
HNRNPU-218ENST00000639064 BCL11AQ9H165 835 aa12.61□□□□□ -0.39
HNRNPU-218ENST00000639064 KNDC1Q76NI1 1749 aa12.61□□□□□ -0.39
HNRNPU-218ENST00000639064 CPS1P31327 1500 aa12.61□□□□□ -0.39
HNRNPU-218ENST00000639064 KCNA6P17658 529 aa12.6□□□□□ -0.39
HNRNPU-218ENST00000639064 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
HNRNPU-218ENST00000639064 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
HNRNPU-218ENST00000639064 NEFLP07196 543 aa12.59□□□□□ -0.39
HNRNPU-218ENST00000639064 PIK3R4Q99570 1358 aa12.59□□□□□ -0.39
HNRNPU-218ENST00000639064 SIRT1Q96EB6 747 aa12.58□□□□□ -0.39
HNRNPU-218ENST00000639064 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.39
HNRNPU-218ENST00000639064 STRCQ7RTU9 1775 aa12.58□□□□□ -0.39
HNRNPU-218ENST00000639064 XRN1Q8IZH2 1706 aaKnown RBP12.58□□□□□ -0.4
HNRNPU-218ENST00000639064 SLC24A1O60721 1099 aa12.58□□□□□ -0.4
HNRNPU-218ENST00000639064 CABP2Q9NPB3 220 aa12.58□□□□□ -0.4
HNRNPU-218ENST00000639064 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
HNRNPU-218ENST00000639064 CDCA8Q53HL2 280 aa12.57□□□□□ -0.4
HNRNPU-218ENST00000639064 RBM33Q96EV2 1170 aaKnown RBP12.57□□□□□ -0.4
HNRNPU-218ENST00000639064 CHD2O14647 1828 aaKnown RBP12.57□□□□□ -0.4
HNRNPU-218ENST00000639064 PTCH1Q13635 1447 aa12.57□□□□□ -0.4
HNRNPU-218ENST00000639064 SRPK2P78362 688 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-218ENST00000639064 CDK19Q9BWU1 502 aa12.55□□□□□ -0.4
HNRNPU-218ENST00000639064 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-218ENST00000639064 CCER2I3L3R5 266 aa12.54□□□□□ -0.4
HNRNPU-218ENST00000639064 MYOM1P52179 1685 aa12.54□□□□□ -0.4
HNRNPU-218ENST00000639064 PANK3Q9H999 370 aa12.53□□□□□ -0.4
HNRNPU-218ENST00000639064 WASLO00401 505 aaPredicted RBP12.53□□□□□ -0.4
HNRNPU-218ENST00000639064 ANP32CO43423 234 aa12.53□□□□□ -0.4
HNRNPU-218ENST00000639064 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
HNRNPU-218ENST00000639064 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.4
HNRNPU-218ENST00000639064 SLC12A5Q9H2X9 1139 aa12.52□□□□□ -0.4
HNRNPU-218ENST00000639064 NWD1Q149M9 1564 aa12.52□□□□□ -0.41
HNRNPU-218ENST00000639064 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
HNRNPU-218ENST00000639064 PUS7Q96PZ0 661 aaKnown RBP12.5□□□□□ -0.41
HNRNPU-218ENST00000639064 STRCP1A6NGW2 1772 aa12.5□□□□□ -0.41
HNRNPU-218ENST00000639064 ADGRB2O60241 1585 aa12.5□□□□□ -0.41
HNRNPU-218ENST00000639064 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
HNRNPU-218ENST00000639064 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
HNRNPU-218ENST00000639064 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
HNRNPU-218ENST00000639064 ATAD2Q6PL18 1390 aa12.48□□□□□ -0.41
HNRNPU-218ENST00000639064 PRR36Q9H6K5 1346 aa12.48□□□□□ -0.41
HNRNPU-218ENST00000639064 NALCNQ8IZF0 1738 aa12.48□□□□□ -0.41
HNRNPU-218ENST00000639064 CABP1Q9NZU7 370 aa12.48□□□□□ -0.41
HNRNPU-218ENST00000639064 MSH5O43196 834 aa12.47□□□□□ -0.41
HNRNPU-218ENST00000639064 NUDT16Q96DE0 195 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-218ENST00000639064 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
HNRNPU-218ENST00000639064 NKTRP30414 1462 aaKnown RBP12.47□□□□□ -0.41
HNRNPU-218ENST00000639064 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
HNRNPU-218ENST00000639064 ATP7BP35670 1465 aa12.47□□□□□ -0.41
HNRNPU-218ENST00000639064 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.42
HNRNPU-218ENST00000639064 TMEM94Q12767 1356 aa12.45□□□□□ -0.42
HNRNPU-218ENST00000639064 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
HNRNPU-218ENST00000639064 DMRT2Q9Y5R5 561 aa12.45□□□□□ -0.42
HNRNPU-218ENST00000639064 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
HNRNPU-218ENST00000639064 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 A0A1W2PP64 1363 aa12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 PRKRIP1Q9H875 184 aaPredicted RBP12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 ANKRD36BQ8N2N9 1353 aa12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 CC2D1BQ5T0F9 858 aaKnown RBP12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 NINLQ9Y2I6 1382 aa12.44□□□□□ -0.42
HNRNPU-218ENST00000639064 NSD3Q9BZ95 1437 aa12.43□□□□□ -0.42
HNRNPU-218ENST00000639064 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
HNRNPU-218ENST00000639064 AMER1Q5JTC6 1135 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-218ENST00000639064 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
HNRNPU-218ENST00000639064 RGPD8O14715 1765 aaPredicted RBP12.42□□□□□ -0.42
HNRNPU-218ENST00000639064 IRX6P78412 446 aaPredicted RBP12.41□□□□□ -0.42
HNRNPU-218ENST00000639064 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
HNRNPU-218ENST00000639064 TERF2IPQ9NYB0 399 aa12.41□□□□□ -0.42
HNRNPU-218ENST00000639064 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
HNRNPU-218ENST00000639064 TOPAZ1Q8N9V7 1692 aa12.41□□□□□ -0.42
HNRNPU-218ENST00000639064 LRRC7Q96NW7 1537 aa12.41□□□□□ -0.42
HNRNPU-218ENST00000639064 HDGFL2Q7Z4V5 671 aaPredicted RBP12.41□□□□□ -0.42
HNRNPU-218ENST00000639064 HNRNPUQ00839 825 aaKnown RBP eCLIP12.4□□□□□ -0.43
HNRNPU-218ENST00000639064 KTN1Q86UP2 1357 aaKnown RBP12.39□□□□□ -0.43
HNRNPU-218ENST00000639064 CPSF1Q10570 1443 aaKnown RBP12.39□□□□□ -0.43
HNRNPU-218ENST00000639064 XIRP1Q702N8 1843 aaKnown RBP12.39□□□□□ -0.43
HNRNPU-218ENST00000639064 ACEP12821 1306 aa12.39□□□□□ -0.43
HNRNPU-218ENST00000639064 ANKARQ7Z5J8 1434 aa12.39□□□□□ -0.43
HNRNPU-218ENST00000639064 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
HNRNPU-218ENST00000639064 FANCIQ9NVI1 1328 aa12.38□□□□□ -0.43
HNRNPU-218ENST00000639064 NCOA3Q9Y6Q9 1424 aa12.38□□□□□ -0.43
HNRNPU-218ENST00000639064 PARD3Q8TEW0 1356 aa12.38□□□□□ -0.43
HNRNPU-218ENST00000639064 CCDC184Q52MB2 194 aa12.38□□□□□ -0.43
HNRNPU-218ENST00000639064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.37□□□□□ -0.43
HNRNPU-218ENST00000639064 ATF3P18847 181 aa12.37□□□□□ -0.43
HNRNPU-218ENST00000639064 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
HNRNPU-218ENST00000639064 ORAI2Q96SN7 254 aa12.37□□□□□ -0.43
HNRNPU-218ENST00000639064 ITSN1Q15811 1721 aa12.36□□□□□ -0.43
HNRNPU-218ENST00000639064 MSH6P52701 1360 aa12.36□□□□□ -0.43
HNRNPU-218ENST00000639064 CGNL1Q0VF96 1302 aa12.36□□□□□ -0.43
HNRNPU-218ENST00000639064 RALBP1Q15311 655 aa12.36□□□□□ -0.43
HNRNPU-218ENST00000639064 NGDNQ8NEJ9 315 aaKnown RBP12.36□□□□□ -0.43
HNRNPU-218ENST00000639064 NPC1L1Q9UHC9 1359 aa12.36□□□□□ -0.43
HNRNPU-218ENST00000639064 GGNBP2Q9H3C7 697 aa12.35□□□□□ -0.43
HNRNPU-218ENST00000639064 PHF8Q9UPP1 1060 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms