RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 XRN1Q8IZH2 1706 aaKnown RBP9.35□□□□□ -0.91
NECAP1-213ENST00000638883 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-213ENST00000638883 RIOK3O14730 519 aaKnown RBP9.35□□□□□ -0.91
NECAP1-213ENST00000638883 SETD5Q9C0A6 1442 aa9.34□□□□□ -0.91
NECAP1-213ENST00000638883 L1TD1Q5T7N2 865 aaKnown RBP9.34□□□□□ -0.91
NECAP1-213ENST00000638883 TMEM132AQ24JP5 1023 aa9.33□□□□□ -0.92
NECAP1-213ENST00000638883 RASEFQ8IZ41 740 aa9.33□□□□□ -0.92
NECAP1-213ENST00000638883 POGZQ7Z3K3 1410 aa9.33□□□□□ -0.92
NECAP1-213ENST00000638883 ERBINQ96RT1 1412 aa9.33□□□□□ -0.92
NECAP1-213ENST00000638883 SLC4A3P48751 1232 aa9.33□□□□□ -0.92
NECAP1-213ENST00000638883 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.32□□□□□ -0.92
NECAP1-213ENST00000638883 KLHL34Q8N239 644 aa9.32□□□□□ -0.92
NECAP1-213ENST00000638883 RPRD2Q5VT52 1461 aaKnown RBP9.32□□□□□ -0.92
NECAP1-213ENST00000638883 TSPOAP1O95153 1857 aa9.32□□□□□ -0.92
NECAP1-213ENST00000638883 NEO1Q92859 1461 aa9.32□□□□□ -0.92
NECAP1-213ENST00000638883 CEP170BQ9Y4F5 1589 aaPredicted RBP9.32□□□□□ -0.92
NECAP1-213ENST00000638883 RGS3P49796 1198 aa9.31□□□□□ -0.92
NECAP1-213ENST00000638883 PDE4AP27815 886 aa9.31□□□□□ -0.92
NECAP1-213ENST00000638883 MRS2Q9HD23 443 aa9.31□□□□□ -0.92
NECAP1-213ENST00000638883 KCNV2Q8TDN2 545 aa9.31□□□□□ -0.92
NECAP1-213ENST00000638883 MON2Q7Z3U7 1717 aa9.31□□□□□ -0.92
NECAP1-213ENST00000638883 NCLP19338 710 aaKnown RBP9.3□□□□□ -0.92
NECAP1-213ENST00000638883 STRCQ7RTU9 1775 aa9.3□□□□□ -0.92
NECAP1-213ENST00000638883 ASXL2Q76L83 1435 aa9.3□□□□□ -0.92
NECAP1-213ENST00000638883 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-213ENST00000638883 CCDC141Q6ZP82 1450 aa9.3□□□□□ -0.92
NECAP1-213ENST00000638883 TCERG1O14776 1098 aaKnown RBP9.3□□□□□ -0.92
NECAP1-213ENST00000638883 TRIM44Q96DX7 344 aaPredicted RBP9.3□□□□□ -0.92
NECAP1-213ENST00000638883 TRAPPC8Q9Y2L5 1435 aa9.29□□□□□ -0.92
NECAP1-213ENST00000638883 ADGRB2O60241 1585 aa9.29□□□□□ -0.92
NECAP1-213ENST00000638883 PHRF1Q9P1Y6 1649 aaKnown RBP9.29□□□□□ -0.92
NECAP1-213ENST00000638883 ARID3AQ99856 593 aa9.29□□□□□ -0.92
NECAP1-213ENST00000638883 PPP1R15AO75807 674 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-213ENST00000638883 PLCD3Q8N3E9 789 aa9.28□□□□□ -0.92
NECAP1-213ENST00000638883 CHMP7Q8WUX9 453 aaPredicted RBP9.28□□□□□ -0.92
NECAP1-213ENST00000638883 CANXP27824 592 aaKnown RBP9.27□□□□□ -0.92
NECAP1-213ENST00000638883 CHD2O14647 1828 aaKnown RBP9.27□□□□□ -0.92
NECAP1-213ENST00000638883 FRAT2O75474 233 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-213ENST00000638883 RGPD1P0DJD0 1748 aa9.27□□□□□ -0.93
NECAP1-213ENST00000638883 CAMTA1Q9Y6Y1 1673 aa9.27□□□□□ -0.93
NECAP1-213ENST00000638883 RRAGDQ9NQL2 400 aaPredicted RBP9.27□□□□□ -0.93
NECAP1-213ENST00000638883 BRPF1P55201 1214 aaPredicted RBP9.26□□□□□ -0.93
NECAP1-213ENST00000638883 DCAF11Q8TEB1 546 aa9.26□□□□□ -0.93
NECAP1-213ENST00000638883 QRICH2Q9H0J4 1663 aa9.26□□□□□ -0.93
NECAP1-213ENST00000638883 SENP3-EIF4A1A0A087X0R7 540 aa9.25□□□□□ -0.93
NECAP1-213ENST00000638883 ALKQ9UM73 1620 aa9.25□□□□□ -0.93
NECAP1-213ENST00000638883 TAF7LQ5H9L4 462 aa9.25□□□□□ -0.93
NECAP1-213ENST00000638883 ARID3CA6NKF2 412 aa9.25□□□□□ -0.93
NECAP1-213ENST00000638883 PDCL3Q9H2J4 239 aa9.25□□□□□ -0.93
NECAP1-213ENST00000638883 N4BP2Q86UW6 1770 aaPredicted RBP9.25□□□□□ -0.93
NECAP1-213ENST00000638883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-213ENST00000638883 ZFP91Q96JP5 570 aaPredicted RBP9.24□□□□□ -0.93
NECAP1-213ENST00000638883 CDK11BP21127 795 aaKnown RBP9.24□□□□□ -0.93
NECAP1-213ENST00000638883 ANKRD30BQ9BXX2 1392 aa9.24□□□□□ -0.93
NECAP1-213ENST00000638883 ABCA3Q99758 1704 aa9.24□□□□□ -0.93
NECAP1-213ENST00000638883 NOS1P29475 1434 aa9.23□□□□□ -0.93
NECAP1-213ENST00000638883 PTPRMP28827 1452 aa9.23□□□□□ -0.93
NECAP1-213ENST00000638883 NWD1Q149M9 1564 aa9.23□□□□□ -0.93
NECAP1-213ENST00000638883 MED14O60244 1454 aa9.23□□□□□ -0.93
NECAP1-213ENST00000638883 MYOM2P54296 1465 aa9.22□□□□□ -0.93
NECAP1-213ENST00000638883 GOLGA6L3A6NEY3 463 aa9.22□□□□□ -0.93
NECAP1-213ENST00000638883 NAP1L2Q9ULW6 460 aaPredicted RBP9.22□□□□□ -0.93
NECAP1-213ENST00000638883 ZNF326Q5BKZ1 582 aaKnown RBP9.22□□□□□ -0.93
NECAP1-213ENST00000638883 POLR3GLQ9BT43 218 aa9.22□□□□□ -0.93
NECAP1-213ENST00000638883 ARHGAP31Q2M1Z3 1444 aa9.21□□□□□ -0.93
NECAP1-213ENST00000638883 CALD1Q05682 793 aaKnown RBP9.21□□□□□ -0.93
NECAP1-213ENST00000638883 GZF1Q9H116 711 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-213ENST00000638883 CIZ1Q9ULV3 898 aaPredicted RBP9.21□□□□□ -0.93
NECAP1-213ENST00000638883 CHMP4BQ9H444 224 aaKnown RBP9.21□□□□□ -0.94
NECAP1-213ENST00000638883 MFRPQ9BY79 579 aa9.21□□□□□ -0.94
NECAP1-213ENST00000638883 FAM13BQ9NYF5 915 aa9.21□□□□□ -0.94
NECAP1-213ENST00000638883 RGPD8O14715 1765 aaPredicted RBP9.21□□□□□ -0.94
NECAP1-213ENST00000638883 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-213ENST00000638883 JPH4Q96JJ6 628 aa9.2□□□□□ -0.94
NECAP1-213ENST00000638883 BACH2Q9BYV9 841 aa9.2□□□□□ -0.94
NECAP1-213ENST00000638883 A2MP01023 1474 aa9.2□□□□□ -0.94
NECAP1-213ENST00000638883 TPM2P07951 284 aa9.2□□□□□ -0.94
NECAP1-213ENST00000638883 FBXO22Q8NEZ5 403 aa9.2□□□□□ -0.94
NECAP1-213ENST00000638883 ZHX1Q9UKY1 873 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-213ENST00000638883 TRPM3Q9HCF6 1732 aaPredicted RBP9.2□□□□□ -0.94
NECAP1-213ENST00000638883 WNK3Q9BYP7 1800 aa9.19□□□□□ -0.94
NECAP1-213ENST00000638883 VGFO15240 615 aaPredicted RBP9.19□□□□□ -0.94
NECAP1-213ENST00000638883 CLCN1P35523 988 aa9.19□□□□□ -0.94
NECAP1-213ENST00000638883 MYH16Q9H6N6 1097 aa9.19□□□□□ -0.94
NECAP1-213ENST00000638883 KIF20BQ96Q89 1820 aa9.19□□□□□ -0.94
NECAP1-213ENST00000638883 MTUS2Q5JR59 1369 aa9.19□□□□□ -0.94
NECAP1-213ENST00000638883 ANP32BQ92688 251 aaKnown RBP9.19□□□□□ -0.94
NECAP1-213ENST00000638883 CARMIL2Q6F5E8 1435 aa9.18□□□□□ -0.94
NECAP1-213ENST00000638883 FANCAO15360 1455 aa9.18□□□□□ -0.94
NECAP1-213ENST00000638883 C9orf84Q5VXU9 1444 aa9.18□□□□□ -0.94
NECAP1-213ENST00000638883 CHIC2Q9UKJ5 165 aa9.18□□□□□ -0.94
NECAP1-213ENST00000638883 TONSLQ96HA7 1378 aa9.18□□□□□ -0.94
NECAP1-213ENST00000638883 ZBED9Q6R2W3 1325 aa9.17□□□□□ -0.94
NECAP1-213ENST00000638883 MS4A1P11836 297 aa9.17□□□□□ -0.94
NECAP1-213ENST00000638883 POGKQ9P215 609 aa9.17□□□□□ -0.94
NECAP1-213ENST00000638883 SHANK3Q9BYB0 1731 aa9.17□□□□□ -0.94
NECAP1-213ENST00000638883 LMO7Q8WWI1 1683 aa9.17□□□□□ -0.94
NECAP1-213ENST00000638883 ADAMTS7Q9UKP4 1686 aa9.17□□□□□ -0.94
NECAP1-213ENST00000638883 RRP7BPQ9NSQ0 103 aa9.17□□□□□ -0.94
NECAP1-213ENST00000638883 CPS1P31327 1500 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms