RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 ARID3AQ99856 593 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 ASXL1Q8IXJ9 1541 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 ZNF521Q96K83 1311 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 ST18O60284 1047 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 EXOSC9Q06265 439 aaKnown RBP10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 ZSCAN30Q86W11 494 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 SRPK2P78362 688 aaKnown RBP10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 CSPP1Q1MSJ5 1256 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 SYNJ2O15056 1496 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 SHANK2Q9UPX8 1470 aa10.39□□□□□ -0.75
SMARCA2-246ENST00000635739 KIAA2012Q0VF49 1180 aa10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 TNPO1Q92973 898 aaKnown RBP10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 ATF7IPQ6VMQ6 1270 aa10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 SYAP1Q96A49 352 aaPredicted RBP10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 FAM135AQ9P2D6 1515 aa10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 PDCL3Q9H2J4 239 aa10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 MCTP1Q6DN14 999 aa10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 TRMT2AQ8IZ69 625 aaKnown RBP10.38□□□□□ -0.75
SMARCA2-246ENST00000635739 TSR2Q969E8 191 aaKnown RBP10.37□□□□□ -0.75
SMARCA2-246ENST00000635739 SCAF11Q99590 1463 aaKnown RBP10.37□□□□□ -0.75
SMARCA2-246ENST00000635739 MRC2Q9UBG0 1479 aa10.37□□□□□ -0.75
SMARCA2-246ENST00000635739 SAFB2Q14151 953 aaKnown RBP eCLIP10.37□□□□□ -0.75
SMARCA2-246ENST00000635739 ARHGAP5Q13017 1502 aa10.37□□□□□ -0.75
SMARCA2-246ENST00000635739 ANTXR1Q9H6X2 564 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 KIAA0556O60303 1618 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 MTERF4Q7Z6M4 381 aaKnown RBP10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 USP19O94966 1318 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 RLBP1P12271 317 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 RIPK4P57078 832 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 PLCB2Q00722 1185 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 CAVIN1Q6NZI2 390 aaKnown RBP10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 NOB1Q9ULX3 412 aaKnown RBP10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 ADGBQ8N7X0 1667 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 A2MP01023 1474 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 GRIN2AQ12879 1464 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 FSD2A1L4K1 749 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 MCCP23508 829 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 SLC12A5Q9H2X9 1139 aa10.36□□□□□ -0.75
SMARCA2-246ENST00000635739 NPC1L1Q9UHC9 1359 aa10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 CDC45O75419 566 aa10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 CHD1LQ86WJ1 897 aa10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 SENP3Q9H4L4 574 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 LRRIQ1Q96JM4 1722 aa10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 EIF2AK4Q9P2K8 1649 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 HAP1P54257 671 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 RBM10P98175 930 aaKnown RBP10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 CHAF1AQ13111 956 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-246ENST00000635739 APBB1O00213 710 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 EVC2Q86UK5 1308 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 GCC1Q96CN9 775 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 ADAMTS12P58397 1594 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 TERF2IPQ9NYB0 399 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 DISP1Q96F81 1524 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 ZMYM3Q14202 1370 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 HDAC1Q13547 482 aaPredicted RBP10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 RABEP1Q15276 862 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 SNX21Q969T3 373 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 TNNQ9UQP3 1299 aa10.34□□□□□ -0.75
SMARCA2-246ENST00000635739 ZBTB7CA1YPR0 619 aa10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 TPRNQ4KMQ1 711 aa10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 HDGFL2Q7Z4V5 671 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 TMEM57Q8N5G2 664 aa10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 SSH1Q8WYL5 1049 aa10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 POLR3AO14802 1390 aaPredicted RBP10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 PHF14O94880 888 aa10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 TRIM27P14373 513 aa10.33□□□□□ -0.76
SMARCA2-246ENST00000635739 CCDC39Q9UFE4 941 aa10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 NSD3Q9BZ95 1437 aa10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 ELL2O00472 640 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 SMC5Q8IY18 1101 aa10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 FOXD4L4Q8WXT5 416 aaPredicted RBP10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 REC8O95072 547 aa10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 INTS3Q68E01 1043 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 PBRM1Q86U86 1689 aa10.32□□□□□ -0.76
SMARCA2-246ENST00000635739 DIAPH1O60610 1272 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-246ENST00000635739 SSFA2P28290 1259 aa10.31□□□□□ -0.76
SMARCA2-246ENST00000635739 CCDC27Q2M243 656 aa10.31□□□□□ -0.76
SMARCA2-246ENST00000635739 STK26Q9P289 416 aa10.31□□□□□ -0.76
SMARCA2-246ENST00000635739 PRPF40AO75400 957 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-246ENST00000635739 KLHL40Q2TBA0 621 aa10.31□□□□□ -0.76
SMARCA2-246ENST00000635739 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 BMP2KLQ5H9B9 411 aa10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 CYB5RLQ6IPT4 315 aa10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 API5Q9BZZ5 524 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 CWC22Q9HCG8 908 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 ATP10BO94823 1461 aa10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 MBD3O95983 291 aa10.3□□□□□ -0.76
SMARCA2-246ENST00000635739 CEP170Q5SW79 1584 aa10.29□□□□□ -0.76
SMARCA2-246ENST00000635739 UQCRHLA0A096LP55 91 aa10.29□□□□□ -0.76
SMARCA2-246ENST00000635739 UQCRHP07919 91 aa10.29□□□□□ -0.76
SMARCA2-246ENST00000635739 TMPOP42166 694 aaKnown RBP10.29□□□□□ -0.76
SMARCA2-246ENST00000635739 GGT6Q6P531 493 aa10.29□□□□□ -0.76
SMARCA2-246ENST00000635739 HMMRO75330 724 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms