RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 HAX1O00165 279 aa6.4□□□□□ -1.38
CHD2-204ENST00000625463 GOLGA2Q08379 1002 aa6.4□□□□□ -1.38
CHD2-204ENST00000625463 FOXD4L5Q5VV16 416 aaPredicted RBP6.4□□□□□ -1.38
CHD2-204ENST00000625463 NOL8Q76FK4 1167 aaKnown RBP6.4□□□□□ -1.38
CHD2-204ENST00000625463 CCDC125Q86Z20 511 aa6.4□□□□□ -1.38
CHD2-204ENST00000625463 FOXD4L4Q8WXT5 416 aaPredicted RBP6.4□□□□□ -1.38
CHD2-204ENST00000625463 SLC26A8Q96RN1 970 aa6.4□□□□□ -1.38
CHD2-204ENST00000625463 MYH16Q9H6N6 1097 aa6.4□□□□□ -1.38
CHD2-204ENST00000625463 SUDS3Q9H7L9 328 aaPredicted RBP6.4□□□□□ -1.38
CHD2-204ENST00000625463 WDR70Q9NW82 654 aa6.4□□□□□ -1.38
CHD2-204ENST00000625463 ANAPC4Q9UJX5 808 aa6.4□□□□□ -1.38
CHD2-204ENST00000625463 PPP1R12AO14974 1030 aaPredicted RBP6.39□□□□□ -1.39
CHD2-204ENST00000625463 CTAGE5O15320 804 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 TIE1P35590 1138 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 MRE11P49959 708 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 GABPB1Q06547 395 aaPredicted RBP6.39□□□□□ -1.39
CHD2-204ENST00000625463 CSPP1Q1MSJ5 1256 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 RGL3Q3MIN7 710 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 ZNF771Q7L3S4 317 aaPredicted RBP6.39□□□□□ -1.39
CHD2-204ENST00000625463 CREBRFQ8IUR6 639 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 TMC1Q8TDI8 760 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 ARHGEF1Q92888 912 aaKnown RBP6.39□□□□□ -1.39
CHD2-204ENST00000625463 MED4Q9NPJ6 270 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 CADPSQ9ULU8 1353 aa6.39□□□□□ -1.39
CHD2-204ENST00000625463 GOLGA6CA6NDK9 693 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 GOLGA6BA6NDN3 693 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 IPO8O15397 1037 aaKnown RBP6.38□□□□□ -1.39
CHD2-204ENST00000625463 ZRANB2O95218 330 aaKnown RBP eCLIP6.38□□□□□ -1.39
CHD2-204ENST00000625463 GOLGA6DP0CG33 693 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 MS4A1P11836 297 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 SCP2P22307 547 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 TRDNQ13061 729 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 MKRN3Q13064 507 aaKnown RBP6.38□□□□□ -1.39
CHD2-204ENST00000625463 CT47A1Q5JQC4 288 aaPredicted RBP6.38□□□□□ -1.39
CHD2-204ENST00000625463 CHMP4CQ96CF2 233 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 GOLGA6AQ9NYA3 693 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 STK26Q9P289 416 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 NCKAP5LQ9HCH0 1330 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 IGF1RP08069 1367 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 PHLDB1Q86UU1 1377 aa6.38□□□□□ -1.39
CHD2-204ENST00000625463 KLHL33A6NCF5 533 aa6.37□□□□□ -1.39
CHD2-204ENST00000625463 IPO7O95373 1038 aaKnown RBP6.37□□□□□ -1.39
CHD2-204ENST00000625463 UVSSAQ2YD98 709 aa6.37□□□□□ -1.39
CHD2-204ENST00000625463 LRCH2Q5VUJ6 765 aa6.37□□□□□ -1.39
CHD2-204ENST00000625463 SIRT1Q96EB6 747 aa6.37□□□□□ -1.39
CHD2-204ENST00000625463 CCDC97Q96F63 343 aaPredicted RBP6.37□□□□□ -1.39
CHD2-204ENST00000625463 NCAPD3P42695 1498 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 FSD2A1L4K1 749 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 COQ9O75208 318 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 SWT1Q5T5J6 900 aaKnown RBP6.36□□□□□ -1.39
CHD2-204ENST00000625463 GORABQ5T7V8 394 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 WDR78Q5VTH9 848 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 EP400NLQ6ZTU2 488 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 DDX46Q7L014 1031 aaKnown RBP6.36□□□□□ -1.39
CHD2-204ENST00000625463 NME8Q8N427 588 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 CALR3Q96L12 384 aaKnown RBP6.36□□□□□ -1.39
CHD2-204ENST00000625463 MTA3Q9BTC8 594 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 CEP126Q9P2H0 1117 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 TRIM35Q9UPQ4 493 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 SMC3Q9UQE7 1217 aa6.36□□□□□ -1.39
CHD2-204ENST00000625463 RAD50Q92878 1312 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 UQCRHLA0A096LP55 91 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 TPM3P06753 285 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 UQCRHP07919 91 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 RBM26Q5T8P6 1007 aaKnown RBP6.35□□□□□ -1.39
CHD2-204ENST00000625463 TMCO4Q5TGY1 634 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 ZNF280DQ6N043 979 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 DPY19L2Q6NUT2 758 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 ILDR1Q86SU0 546 aaPredicted RBP6.35□□□□□ -1.39
CHD2-204ENST00000625463 RPAINQ86UA6 219 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 SNRNP27Q8WVK2 155 aaKnown RBP6.35□□□□□ -1.39
CHD2-204ENST00000625463 NUCKS1Q9H1E3 243 aaKnown RBP6.35□□□□□ -1.39
CHD2-204ENST00000625463 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.35□□□□□ -1.395e-8■■■□□ 14.7
CHD2-204ENST00000625463 PAXBP1Q9Y5B6 917 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 PRDM2Q13029 1718 aa6.35□□□□□ -1.39
CHD2-204ENST00000625463 GOLGA6L6A8MZA4 724 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 GOLGA6L22H0YM25 854 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 TPD52L2O43399 206 aaKnown RBP6.34□□□□□ -1.39
CHD2-204ENST00000625463 DHX16O60231 1041 aaKnown RBP6.34□□□□□ -1.39
CHD2-204ENST00000625463 XRCC6P12956 609 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHD2-204ENST00000625463 GUCY2CP25092 1073 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 MSNP26038 577 aaKnown RBP6.34□□□□□ -1.39
CHD2-204ENST00000625463 SSFA2P28290 1259 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 ATN1P54259 1190 aaPredicted RBP6.34□□□□□ -1.39
CHD2-204ENST00000625463 CDC37Q16543 378 aaPredicted RBP6.34□□□□□ -1.39
CHD2-204ENST00000625463 HDGFL1Q5TGJ6 251 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 ICE2Q659A1 982 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 SASS6Q6UVJ0 657 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 JMYQ8N9B5 988 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 CXorf38Q8TB03 319 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 BORCS6Q96GS4 357 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 LARP6Q9BRS8 491 aaKnown RBP6.34□□□□□ -1.39
CHD2-204ENST00000625463 HIRIP3Q9BW71 556 aaPredicted RBP6.34□□□□□ -1.39
CHD2-204ENST00000625463 FRMD4BQ9Y2L6 1034 aa6.34□□□□□ -1.39
CHD2-204ENST00000625463 BRD1O95696 1058 aa6.33□□□□□ -1.4
CHD2-204ENST00000625463 SETSIPP0DME0 302 aa6.33□□□□□ -1.4
CHD2-204ENST00000625463 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
CHD2-204ENST00000625463 CD151P48509 253 aa6.33□□□□□ -1.4
CHD2-204ENST00000625463 BECN1Q14457 450 aa6.33□□□□□ -1.4
CHD2-204ENST00000625463 HS1BP3Q53T59 392 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms