RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 INSRP06213 1382 aa26.53■■□□□ 1.84
TREX1-205ENST00000625293 SLIT1O75093 1534 aa26.53■■□□□ 1.84
TREX1-205ENST00000625293 ZNF335Q9H4Z2 1342 aaPredicted RBP26.51■■□□□ 1.84
TREX1-205ENST00000625293 CARD14Q9BXL6 1004 aa26.51■■□□□ 1.83
TREX1-205ENST00000625293 EID1Q9Y6B2 187 aa26.51■■□□□ 1.83
TREX1-205ENST00000625293 NPHP4O75161 1426 aaPredicted RBP26.5■■□□□ 1.83
TREX1-205ENST00000625293 YTHDC2Q9H6S0 1430 aaKnown RBP26.5■■□□□ 1.83
TREX1-205ENST00000625293 PPP2R1AP30153 589 aa26.48■■□□□ 1.83
TREX1-205ENST00000625293 FKBP8Q14318 412 aa26.48■■□□□ 1.83
TREX1-205ENST00000625293 MED14O60244 1454 aa26.48■■□□□ 1.83
TREX1-205ENST00000625293 SETD1AO15047 1707 aaKnown RBP26.46■■□□□ 1.83
TREX1-205ENST00000625293 EVC2Q86UK5 1308 aa26.46■■□□□ 1.83
TREX1-205ENST00000625293 NEFLP07196 543 aa26.45■■□□□ 1.82
TREX1-205ENST00000625293 SMG6Q86US8 1419 aaKnown RBP26.45■■□□□ 1.82
TREX1-205ENST00000625293 BLMP54132 1417 aaPredicted RBP26.43■■□□□ 1.82
TREX1-205ENST00000625293 SLC26A8Q96RN1 970 aa26.43■■□□□ 1.82
TREX1-205ENST00000625293 DLC1Q96QB1 1528 aa26.42■■□□□ 1.82
TREX1-205ENST00000625293 NRXN3Q9Y4C0 1643 aa26.42■■□□□ 1.82
TREX1-205ENST00000625293 STK26Q9P289 416 aa26.42■■□□□ 1.82
TREX1-205ENST00000625293 BCANQ96GW7 911 aa26.41■■□□□ 1.82
TREX1-205ENST00000625293 SLC12A5Q9H2X9 1139 aa26.41■■□□□ 1.82
TREX1-205ENST00000625293 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.41■■□□□ 1.82
TREX1-205ENST00000625293 USP32Q8NFA0 1604 aa26.4■■□□□ 1.82
TREX1-205ENST00000625293 CERKQ8TCT0 537 aa26.4■■□□□ 1.82
TREX1-205ENST00000625293 NSD3Q9BZ95 1437 aa26.4■■□□□ 1.82
TREX1-205ENST00000625293 LTBP4Q8N2S1 1624 aa26.38■■□□□ 1.81
TREX1-205ENST00000625293 PRAM1Q96QH2 718 aa26.37■■□□□ 1.81
TREX1-205ENST00000625293 NUDCQ9Y266 331 aa26.36■■□□□ 1.81
TREX1-205ENST00000625293 ANKRD36BQ8N2N9 1353 aa26.36■■□□□ 1.81
TREX1-205ENST00000625293 NINLQ9Y2I6 1382 aa26.36■■□□□ 1.81
TREX1-205ENST00000625293 HDGFP51858 240 aaKnown RBP26.35■■□□□ 1.81
TREX1-205ENST00000625293 ABCC11Q96J66 1382 aa26.34■■□□□ 1.81
TREX1-205ENST00000625293 SAFB2Q14151 953 aaKnown RBP eCLIP26.34■■□□□ 1.81
TREX1-205ENST00000625293 CABP2Q9NPB3 220 aa26.33■■□□□ 1.81
TREX1-205ENST00000625293 POGKQ9P215 609 aa26.31■■□□□ 1.8
TREX1-205ENST00000625293 PLEKHG1Q9ULL1 1385 aa26.31■■□□□ 1.8
TREX1-205ENST00000625293 ATAD2Q6PL18 1390 aa26.3■■□□□ 1.8
TREX1-205ENST00000625293 MINK1Q8N4C8 1332 aaPredicted RBP26.29■■□□□ 1.8
TREX1-205ENST00000625293 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
TREX1-205ENST00000625293 METP08581 1390 aa26.28■■□□□ 1.8
TREX1-205ENST00000625293 SENP3-EIF4A1A0A087X0R7 540 aa26.28■■□□□ 1.8
TREX1-205ENST00000625293 ADAMTS8Q9UP79 889 aa26.28■■□□□ 1.8
TREX1-205ENST00000625293 TECPR2O15040 1411 aa26.26■■□□□ 1.79
TREX1-205ENST00000625293 NSD2O96028 1365 aa26.26■■□□□ 1.79
TREX1-205ENST00000625293 SRPK2P78362 688 aaKnown RBP26.25■■□□□ 1.79
TREX1-205ENST00000625293 ADAMTS13Q76LX8 1427 aa26.25■■□□□ 1.79
TREX1-205ENST00000625293 KNDC1Q76NI1 1749 aa26.25■■□□□ 1.79
TREX1-205ENST00000625293 PLEKHH1Q9ULM0 1364 aa26.25■■□□□ 1.79
TREX1-205ENST00000625293 RBM33Q96EV2 1170 aaKnown RBP26.25■■□□□ 1.79
TREX1-205ENST00000625293 CD163L1Q9NR16 1453 aa26.25■■□□□ 1.79
TREX1-205ENST00000625293 CGNL1Q0VF96 1302 aa26.25■■□□□ 1.79
TREX1-205ENST00000625293 PDE3BQ13370 1112 aa26.24■■□□□ 1.79
TREX1-205ENST00000625293 ILDR1Q86SU0 546 aaPredicted RBP26.24■■□□□ 1.79
TREX1-205ENST00000625293 A0A1W2PP64 1363 aa26.24■■□□□ 1.79
TREX1-205ENST00000625293 POLR3AO14802 1390 aaPredicted RBP26.24■■□□□ 1.79
TREX1-205ENST00000625293 WDR43Q15061 677 aaKnown RBP eCLIP26.23■■□□□ 1.79
TREX1-205ENST00000625293 ERICH6BQ5W0A0 696 aa26.23■■□□□ 1.79
TREX1-205ENST00000625293 RNF123Q5XPI4 1314 aa26.23■■□□□ 1.79
TREX1-205ENST00000625293 SIRT1Q96EB6 747 aa26.23■■□□□ 1.79
TREX1-205ENST00000625293 TBX22Q9Y458 520 aa26.23■■□□□ 1.79
TREX1-205ENST00000625293 FAM135BQ49AJ0 1406 aa26.22■■□□□ 1.79
TREX1-205ENST00000625293 WAPLQ7Z5K2 1190 aa26.21■■□□□ 1.79
TREX1-205ENST00000625293 MORC1Q86VD1 984 aa26.21■■□□□ 1.79
TREX1-205ENST00000625293 CDK19Q9BWU1 502 aa26.21■■□□□ 1.79
TREX1-205ENST00000625293 CPS1P31327 1500 aa26.21■■□□□ 1.79
TREX1-205ENST00000625293 KCNA6P17658 529 aa26.19■■□□□ 1.78
TREX1-205ENST00000625293 IRX6P78412 446 aaPredicted RBP26.18■■□□□ 1.78
TREX1-205ENST00000625293 FBXO41Q8TF61 875 aa26.16■■□□□ 1.78
TREX1-205ENST00000625293 LRRC7Q96NW7 1537 aa26.15■■□□□ 1.78
TREX1-205ENST00000625293 TERF2IPQ9NYB0 399 aa26.15■■□□□ 1.78
TREX1-205ENST00000625293 SALL2Q9Y467 1007 aaPredicted RBP26.15■■□□□ 1.78
TREX1-205ENST00000625293 PTPRUQ92729 1446 aa26.14■■□□□ 1.77
TREX1-205ENST00000625293 PROSER2Q86WR7 435 aaPredicted RBP26.12■■□□□ 1.77
TREX1-205ENST00000625293 ATP7BP35670 1465 aa26.12■■□□□ 1.77
TREX1-205ENST00000625293 SHPRHQ149N8 1683 aa26.12■■□□□ 1.77
TREX1-205ENST00000625293 AMOTL2Q9Y2J4 779 aa26.11■■□□□ 1.77
TREX1-205ENST00000625293 ZNF521Q96K83 1311 aa26.11■■□□□ 1.77
TREX1-205ENST00000625293 PELP1Q8IZL8 1130 aaKnown RBP26.1■■□□□ 1.77
TREX1-205ENST00000625293 WASLO00401 505 aaPredicted RBP26.1■■□□□ 1.77
TREX1-205ENST00000625293 CDCA7LQ96GN5 454 aa26.1■■□□□ 1.77
TREX1-205ENST00000625293 CABP1Q9NZU7 370 aa26.1■■□□□ 1.77
TREX1-205ENST00000625293 CHD2O14647 1828 aaKnown RBP26.1■■□□□ 1.77
TREX1-205ENST00000625293 ANKRD26Q9UPS8 1709 aa26.08■■□□□ 1.77
TREX1-205ENST00000625293 UBAP1LF5GYI3 381 aa26.08■■□□□ 1.77
TREX1-205ENST00000625293 TMEM94Q12767 1356 aa26.08■■□□□ 1.76
TREX1-205ENST00000625293 ROBO2Q9HCK4 1378 aa26.08■■□□□ 1.76
TREX1-205ENST00000625293 HDGFL2Q7Z4V5 671 aaPredicted RBP26.07■■□□□ 1.76
TREX1-205ENST00000625293 TNNT2P45379 298 aaPredicted RBP26.07■■□□□ 1.76
TREX1-205ENST00000625293 FYB1O15117 783 aa26.05■■□□□ 1.76
TREX1-205ENST00000625293 MTHFSP49914 203 aa26.05■■□□□ 1.76
TREX1-205ENST00000625293 ADGRB2O60241 1585 aa26.05■■□□□ 1.76
TREX1-205ENST00000625293 DIP2AQ14689 1571 aa26.05■■□□□ 1.76
TREX1-205ENST00000625293 XIRP1Q702N8 1843 aaKnown RBP26.05■■□□□ 1.76
TREX1-205ENST00000625293 NWD1Q149M9 1564 aa26.04■■□□□ 1.76
TREX1-205ENST00000625293 PPP4R2Q9NY27 417 aa26.04■■□□□ 1.76
TREX1-205ENST00000625293 CPSF1Q10570 1443 aaKnown RBP26.04■■□□□ 1.76
TREX1-205ENST00000625293 IQSEC2Q5JU85 1478 aa26.03■■□□□ 1.76
TREX1-205ENST00000625293 PIK3R4Q99570 1358 aa26.03■■□□□ 1.76
TREX1-205ENST00000625293 CCDC146Q8IYE0 955 aa26.02■■□□□ 1.76
TREX1-205ENST00000625293 GGNBP2Q9H3C7 697 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms