RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 USP47Q96K76 1375 aa16.3■□□□□ 0.2
SRRT-216ENST00000618262 ZFYVE9O95405 1425 aa16.3■□□□□ 0.2
SRRT-216ENST00000618262 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
SRRT-216ENST00000618262 SETD1BQ9UPS6 1966 aaKnown RBP16.29■□□□□ 0.2
SRRT-216ENST00000618262 MINK1Q8N4C8 1332 aaPredicted RBP16.28■□□□□ 0.2
SRRT-216ENST00000618262 PRAM1Q96QH2 718 aa16.28■□□□□ 0.2
SRRT-216ENST00000618262 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
SRRT-216ENST00000618262 POGKQ9P215 609 aa16.28■□□□□ 0.2
SRRT-216ENST00000618262 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.2
SRRT-216ENST00000618262 LMTK3Q96Q04 1460 aa16.26■□□□□ 0.19
SRRT-216ENST00000618262 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
SRRT-216ENST00000618262 PPLO60437 1756 aa16.26■□□□□ 0.19
SRRT-216ENST00000618262 SCAF11Q99590 1463 aaKnown RBP16.25■□□□□ 0.19
SRRT-216ENST00000618262 KCNA6P17658 529 aa16.25■□□□□ 0.19
SRRT-216ENST00000618262 DDX10Q13206 875 aaKnown RBP16.25■□□□□ 0.19
SRRT-216ENST00000618262 PLEKHH1Q9ULM0 1364 aa16.24■□□□□ 0.19
SRRT-216ENST00000618262 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
SRRT-216ENST00000618262 MYOM2P54296 1465 aa16.22■□□□□ 0.19
SRRT-216ENST00000618262 FANCIQ9NVI1 1328 aa16.21■□□□□ 0.19
SRRT-216ENST00000618262 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
SRRT-216ENST00000618262 ADAMTS13Q76LX8 1427 aa16.21■□□□□ 0.19
SRRT-216ENST00000618262 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
SRRT-216ENST00000618262 ALKQ9UM73 1620 aa16.2■□□□□ 0.18
SRRT-216ENST00000618262 ZNF335Q9H4Z2 1342 aaPredicted RBP16.2■□□□□ 0.18
SRRT-216ENST00000618262 PLEKHG1Q9ULL1 1385 aa16.2■□□□□ 0.18
SRRT-216ENST00000618262 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
SRRT-216ENST00000618262 NPHP4O75161 1426 aaPredicted RBP16.19■□□□□ 0.18
SRRT-216ENST00000618262 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
SRRT-216ENST00000618262 CABP2Q9NPB3 220 aa16.19■□□□□ 0.18
SRRT-216ENST00000618262 BCCIPQ9P287 314 aaKnown RBP eCLIP16.19■□□□□ 0.18
SRRT-216ENST00000618262 IQGAP1P46940 1657 aa16.19■□□□□ 0.18
SRRT-216ENST00000618262 YTHDC2Q9H6S0 1430 aaKnown RBP16.18■□□□□ 0.18
SRRT-216ENST00000618262 ARHGAP23Q9P227 1491 aa16.18■□□□□ 0.18
SRRT-216ENST00000618262 TMC1Q8TDI8 760 aa16.17■□□□□ 0.18
SRRT-216ENST00000618262 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
SRRT-216ENST00000618262 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
SRRT-216ENST00000618262 SLIT1O75093 1534 aa16.17■□□□□ 0.18
SRRT-216ENST00000618262 NRXN1Q9ULB1 1477 aa16.17■□□□□ 0.18
SRRT-216ENST00000618262 ROBO2Q9HCK4 1378 aa16.17■□□□□ 0.18
SRRT-216ENST00000618262 WASHC2AQ641Q2 1341 aa16.17■□□□□ 0.18
SRRT-216ENST00000618262 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
SRRT-216ENST00000618262 CHMP4BQ9H444 224 aaKnown RBP16.17■□□□□ 0.18
SRRT-216ENST00000618262 ASXL1Q8IXJ9 1541 aa16.17■□□□□ 0.18
SRRT-216ENST00000618262 STAC3Q96MF2 364 aa16.16■□□□□ 0.18
SRRT-216ENST00000618262 TESK2Q96S53 571 aa16.16■□□□□ 0.18
SRRT-216ENST00000618262 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
SRRT-216ENST00000618262 DISP3Q9P2K9 1392 aa16.15■□□□□ 0.18
SRRT-216ENST00000618262 PROSER2Q86WR7 435 aaPredicted RBP16.15■□□□□ 0.18
SRRT-216ENST00000618262 NRXN3Q9Y4C0 1643 aa16.15■□□□□ 0.18
SRRT-216ENST00000618262 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
SRRT-216ENST00000618262 ADGRB1O14514 1584 aa16.13■□□□□ 0.17
SRRT-216ENST00000618262 ZNF142P52746 1687 aaPredicted RBP16.12■□□□□ 0.17
SRRT-216ENST00000618262 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
SRRT-216ENST00000618262 NEURL4Q96JN8 1562 aa16.11■□□□□ 0.17
SRRT-216ENST00000618262 TMEM132AQ24JP5 1023 aa16.11■□□□□ 0.17
SRRT-216ENST00000618262 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
SRRT-216ENST00000618262 TMF1P82094 1093 aa16.1■□□□□ 0.17
SRRT-216ENST00000618262 CDK19Q9BWU1 502 aa16.09■□□□□ 0.17
SRRT-216ENST00000618262 SLC12A5Q9H2X9 1139 aa16.09■□□□□ 0.17
SRRT-216ENST00000618262 LRPPRCP42704 1394 aaKnown RBP16.09■□□□□ 0.17
SRRT-216ENST00000618262 EIF3AQ14152 1382 aaKnown RBP16.08■□□□□ 0.17
SRRT-216ENST00000618262 PMFBP1Q8TBY8 1022 aa16.08■□□□□ 0.16
SRRT-216ENST00000618262 MIER1Q8N108 512 aa16.08■□□□□ 0.16
SRRT-216ENST00000618262 SETBP1Q9Y6X0 1596 aa16.07■□□□□ 0.16
SRRT-216ENST00000618262 BBXQ8WY36 941 aaPredicted RBP16.07■□□□□ 0.16
SRRT-216ENST00000618262 STRCQ7RTU9 1775 aa16.06■□□□□ 0.16
SRRT-216ENST00000618262 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
SRRT-216ENST00000618262 ABCC11Q96J66 1382 aa16.05■□□□□ 0.16
SRRT-216ENST00000618262 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
SRRT-216ENST00000618262 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
SRRT-216ENST00000618262 DDX17Q92841 729 aaKnown RBP16.04■□□□□ 0.16
SRRT-216ENST00000618262 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
SRRT-216ENST00000618262 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
SRRT-216ENST00000618262 MED14O60244 1454 aa16.04■□□□□ 0.16
SRRT-216ENST00000618262 CCDC7Q96M83 1385 aa16.04■□□□□ 0.16
SRRT-216ENST00000618262 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
SRRT-216ENST00000618262 POLR1AO95602 1720 aaPredicted RBP16.03■□□□□ 0.16
SRRT-216ENST00000618262 PANK3Q9H999 370 aa16.02■□□□□ 0.16
SRRT-216ENST00000618262 EVC2Q86UK5 1308 aa16.02■□□□□ 0.16
SRRT-216ENST00000618262 SETD1AO15047 1707 aaKnown RBP16.02■□□□□ 0.15
SRRT-216ENST00000618262 IGSF3O75054 1194 aa16.02■□□□□ 0.15
SRRT-216ENST00000618262 WASLO00401 505 aaPredicted RBP16.01■□□□□ 0.15
SRRT-216ENST00000618262 TNNT2P45379 298 aaPredicted RBP16■□□□□ 0.15
SRRT-216ENST00000618262 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
SRRT-216ENST00000618262 ORAI2Q96SN7 254 aa16■□□□□ 0.15
SRRT-216ENST00000618262 ESCO1Q5FWF5 840 aa16■□□□□ 0.15
SRRT-216ENST00000618262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16■□□□□ 0.15
SRRT-216ENST00000618262 NUDT16Q96DE0 195 aaKnown RBP15.99■□□□□ 0.15
SRRT-216ENST00000618262 SOX12O15370 315 aa15.99■□□□□ 0.15
SRRT-216ENST00000618262 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
SRRT-216ENST00000618262 ARHGEF28Q8N1W1 1705 aaKnown RBP15.99■□□□□ 0.15
SRRT-216ENST00000618262 PRR36Q9H6K5 1346 aa15.98■□□□□ 0.15
SRRT-216ENST00000618262 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
SRRT-216ENST00000618262 PIP4K2BP78356 416 aa15.98■□□□□ 0.15
SRRT-216ENST00000618262 QRICH2Q9H0J4 1663 aa15.98■□□□□ 0.15
SRRT-216ENST00000618262 KIAA1210Q9ULL0 1709 aa15.97■□□□□ 0.15
SRRT-216ENST00000618262 LAMC1P11047 1609 aa15.97■□□□□ 0.15
SRRT-216ENST00000618262 LMOD2Q6P5Q4 547 aa15.97■□□□□ 0.15
SRRT-216ENST00000618262 SENP3-EIF4A1A0A087X0R7 540 aa15.96■□□□□ 0.15
SRRT-216ENST00000618262 ATF3P18847 181 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms