RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 HSPA2P54652 639 aa13.57□□□□□ -0.24
SNRNP70-208ENST00000599687 ZNF687Q8N1G0 1237 aa13.57□□□□□ -0.24
SNRNP70-208ENST00000599687 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
SNRNP70-208ENST00000599687 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
SNRNP70-208ENST00000599687 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
SNRNP70-208ENST00000599687 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
SNRNP70-208ENST00000599687 GGT6Q6P531 493 aa13.55□□□□□ -0.24
SNRNP70-208ENST00000599687 ZC3H15Q8WU90 426 aaKnown RBP13.55□□□□□ -0.24
SNRNP70-208ENST00000599687 PREX1Q8TCU6 1659 aa13.55□□□□□ -0.24
SNRNP70-208ENST00000599687 MROH2AA6NES4 1674 aa13.54□□□□□ -0.24
SNRNP70-208ENST00000599687 NEUROD2Q15784 382 aa13.54□□□□□ -0.24
SNRNP70-208ENST00000599687 ZMYM3Q14202 1370 aa13.54□□□□□ -0.24
SNRNP70-208ENST00000599687 SETD1BQ9UPS6 1966 aaKnown RBP13.54□□□□□ -0.24
SNRNP70-208ENST00000599687 MAST1Q9Y2H9 1570 aa13.53□□□□□ -0.24
SNRNP70-208ENST00000599687 CLTCQ00610 1675 aaKnown RBP13.53□□□□□ -0.24
SNRNP70-208ENST00000599687 KIF3BO15066 747 aa13.52□□□□□ -0.25
SNRNP70-208ENST00000599687 PTPN23Q9H3S7 1636 aa13.5□□□□□ -0.25
SNRNP70-208ENST00000599687 UHRF1BP1Q6BDS2 1440 aa13.5□□□□□ -0.25
SNRNP70-208ENST00000599687 FGD6Q6ZV73 1430 aa13.49□□□□□ -0.25
SNRNP70-208ENST00000599687 SLC24A3Q9HC58 644 aa13.49□□□□□ -0.25
SNRNP70-208ENST00000599687 NPATQ14207 1427 aa13.48□□□□□ -0.25
SNRNP70-208ENST00000599687 TCOF1Q13428 1488 aaKnown RBP13.48□□□□□ -0.25
SNRNP70-208ENST00000599687 ABCC5O15440 1437 aa13.47□□□□□ -0.25
SNRNP70-208ENST00000599687 EFCAB3Q8N7B9 438 aa13.47□□□□□ -0.25
SNRNP70-208ENST00000599687 PTPRKQ15262 1439 aa13.47□□□□□ -0.25
SNRNP70-208ENST00000599687 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
SNRNP70-208ENST00000599687 MICALL2Q8IY33 904 aa13.46□□□□□ -0.25
SNRNP70-208ENST00000599687 CROCC2H7BZ55 1655 aa13.46□□□□□ -0.26
SNRNP70-208ENST00000599687 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
SNRNP70-208ENST00000599687 DNMT1P26358 1616 aaKnown RBP13.45□□□□□ -0.26
SNRNP70-208ENST00000599687 DAPK1P53355 1430 aa13.45□□□□□ -0.26
SNRNP70-208ENST00000599687 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
SNRNP70-208ENST00000599687 WASHC2CQ9Y4E1 1318 aa13.44□□□□□ -0.26
SNRNP70-208ENST00000599687 SHANK2Q9UPX8 1470 aa13.44□□□□□ -0.26
SNRNP70-208ENST00000599687 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
SNRNP70-208ENST00000599687 EIF2AK4Q9P2K8 1649 aaKnown RBP13.43□□□□□ -0.26
SNRNP70-208ENST00000599687 GPR153Q6NV75 609 aa13.43□□□□□ -0.26
SNRNP70-208ENST00000599687 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
SNRNP70-208ENST00000599687 DUOX2Q9NRD8 1548 aa13.43□□□□□ -0.26
SNRNP70-208ENST00000599687 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
SNRNP70-208ENST00000599687 SEMA3EO15041 775 aa13.42□□□□□ -0.26
SNRNP70-208ENST00000599687 MFRPQ9BY79 579 aa13.42□□□□□ -0.26
SNRNP70-208ENST00000599687 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
SNRNP70-208ENST00000599687 TESPA1A2RU30 521 aaPredicted RBP13.41□□□□□ -0.26
SNRNP70-208ENST00000599687 FBXO31Q5XUX0 539 aaPredicted RBP13.41□□□□□ -0.26
SNRNP70-208ENST00000599687 KIF15Q9NS87 1388 aa13.41□□□□□ -0.26
SNRNP70-208ENST00000599687 MYO3AQ8NEV4 1616 aa13.4□□□□□ -0.26
SNRNP70-208ENST00000599687 FAM50AQ14320 339 aaKnown RBP13.4□□□□□ -0.26
SNRNP70-208ENST00000599687 CHIC2Q9UKJ5 165 aa13.4□□□□□ -0.26
SNRNP70-208ENST00000599687 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
SNRNP70-208ENST00000599687 PZPP20742 1482 aa13.39□□□□□ -0.27
SNRNP70-208ENST00000599687 ZNF142P52746 1687 aaPredicted RBP13.39□□□□□ -0.27
SNRNP70-208ENST00000599687 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
SNRNP70-208ENST00000599687 ANKRD30AQ9BXX3 1397 aa13.38□□□□□ -0.27
SNRNP70-208ENST00000599687 CAMSAP1Q5T5Y3 1602 aa13.38□□□□□ -0.27
SNRNP70-208ENST00000599687 ABCC3O15438 1527 aa13.38□□□□□ -0.27
SNRNP70-208ENST00000599687 NCOA1Q15788 1441 aa13.38□□□□□ -0.27
SNRNP70-208ENST00000599687 ERBINQ96RT1 1412 aa13.38□□□□□ -0.27
SNRNP70-208ENST00000599687 ZC3H13Q5T200 1668 aaKnown RBP13.37□□□□□ -0.27
SNRNP70-208ENST00000599687 SOX12O15370 315 aa13.37□□□□□ -0.27
SNRNP70-208ENST00000599687 E2F4Q16254 413 aa13.37□□□□□ -0.27
SNRNP70-208ENST00000599687 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
SNRNP70-208ENST00000599687 PTPRTO14522 1441 aa13.37□□□□□ -0.27
SNRNP70-208ENST00000599687 TNRQ92752 1358 aa13.36□□□□□ -0.27
SNRNP70-208ENST00000599687 TMEM92Q6UXU6 159 aa13.36□□□□□ -0.27
SNRNP70-208ENST00000599687 A2ML1A8K2U0 1454 aa13.36□□□□□ -0.27
SNRNP70-208ENST00000599687 ADGRL2O95490 1459 aa13.36□□□□□ -0.27
SNRNP70-208ENST00000599687 PPP1R37O75864 691 aa13.35□□□□□ -0.27
SNRNP70-208ENST00000599687 ARSIQ5FYB1 569 aa13.35□□□□□ -0.27
SNRNP70-208ENST00000599687 CEP152O94986 1710 aa13.35□□□□□ -0.27
SNRNP70-208ENST00000599687 LSM11P83369 360 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNRNP70-208ENST00000599687 PLA2R1Q13018 1463 aa13.34□□□□□ -0.27
SNRNP70-208ENST00000599687 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
SNRNP70-208ENST00000599687 PRDM15P57071 1507 aaPredicted RBP13.34□□□□□ -0.27
SNRNP70-208ENST00000599687 DEPDC5O75140 1603 aa13.33□□□□□ -0.28
SNRNP70-208ENST00000599687 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
SNRNP70-208ENST00000599687 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
SNRNP70-208ENST00000599687 ZNF316A6NFI3 1004 aaPredicted RBP13.32□□□□□ -0.28
SNRNP70-208ENST00000599687 SPATA31D1Q6ZQQ2 1576 aa13.32□□□□□ -0.28
SNRNP70-208ENST00000599687 NLRP1Q9C000 1473 aa13.31□□□□□ -0.28
SNRNP70-208ENST00000599687 ZMYND10O75800 440 aa13.31□□□□□ -0.28
SNRNP70-208ENST00000599687 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
SNRNP70-208ENST00000599687 ERVK-7P63135 1459 aa13.3□□□□□ -0.28
SNRNP70-208ENST00000599687 CFAP65Q6ZU64 1925 aaKnown RBP13.3□□□□□ -0.28
SNRNP70-208ENST00000599687 KANK1Q14678 1352 aa13.3□□□□□ -0.28
SNRNP70-208ENST00000599687 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
SNRNP70-208ENST00000599687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.29□□□□□ -0.281e-11■■■□□ 17.8
SNRNP70-208ENST00000599687 VWDEQ8N2E2 1590 aa13.28□□□□□ -0.28
SNRNP70-208ENST00000599687 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
SNRNP70-208ENST00000599687 PBX2P40425 430 aa13.28□□□□□ -0.28
SNRNP70-208ENST00000599687 PLA2G2EQ9NZK7 142 aa13.28□□□□□ -0.28
SNRNP70-208ENST00000599687 ANKRD50Q9ULJ7 1429 aa13.28□□□□□ -0.28
SNRNP70-208ENST00000599687 ROCK1Q13464 1354 aa13.27□□□□□ -0.29
SNRNP70-208ENST00000599687 LMTK2Q8IWU2 1503 aa13.27□□□□□ -0.29
SNRNP70-208ENST00000599687 LTBP4Q8N2S1 1624 aa13.27□□□□□ -0.29
SNRNP70-208ENST00000599687 ITGAEP38570 1179 aa13.25□□□□□ -0.29
SNRNP70-208ENST00000599687 ANKLE2Q86XL3 938 aa13.25□□□□□ -0.29
SNRNP70-208ENST00000599687 HCSTQ9UBK5 93 aa13.25□□□□□ -0.29
SNRNP70-208ENST00000599687 POLR1AO95602 1720 aaPredicted RBP13.25□□□□□ -0.29
SNRNP70-208ENST00000599687 FBXO22Q8NEZ5 403 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms