RNA–Protein interactions for RNA: ENST00000596613.5

FARP1-220, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-220ENST00000596613 MLH3Q9UHC1 1453 aa12.8□□□□□ -0.36
FARP1-220ENST00000596613 BCORL1Q5H9F3 1711 aa12.79□□□□□ -0.36
FARP1-220ENST00000596613 MLLT3P42568 568 aaPredicted RBP12.79□□□□□ -0.36
FARP1-220ENST00000596613 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
FARP1-220ENST00000596613 TRAPPC8Q9Y2L5 1435 aa12.79□□□□□ -0.36
FARP1-220ENST00000596613 HECW2Q9P2P5 1572 aa12.78□□□□□ -0.36
FARP1-220ENST00000596613 ADAMTSL3P82987 1691 aa12.78□□□□□ -0.36
FARP1-220ENST00000596613 ABCC1P33527 1531 aa12.78□□□□□ -0.36
FARP1-220ENST00000596613 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
FARP1-220ENST00000596613 OXER1Q8TDS5 423 aa12.77□□□□□ -0.37
FARP1-220ENST00000596613 UPF1Q92900 1129 aaKnown RBP eCLIP12.77□□□□□ -0.37
FARP1-220ENST00000596613 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
FARP1-220ENST00000596613 KDM5CP41229 1560 aa12.76□□□□□ -0.37
FARP1-220ENST00000596613 ITSN2Q9NZM3 1697 aa12.76□□□□□ -0.37
FARP1-220ENST00000596613 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
FARP1-220ENST00000596613 MADDQ8WXG6 1647 aa12.74□□□□□ -0.37
FARP1-220ENST00000596613 ARHGEF12Q9NZN5 1544 aa12.74□□□□□ -0.37
FARP1-220ENST00000596613 NCOA2Q15596 1464 aa12.74□□□□□ -0.37
FARP1-220ENST00000596613 ZNF644Q9H582 1327 aaPredicted RBP12.74□□□□□ -0.37
FARP1-220ENST00000596613 GGT6Q6P531 493 aa12.74□□□□□ -0.37
FARP1-220ENST00000596613 TIAM1Q13009 1591 aa12.73□□□□□ -0.37
FARP1-220ENST00000596613 SYCP2Q9BX26 1530 aa12.73□□□□□ -0.37
FARP1-220ENST00000596613 LRRC9Q6ZRR7 1453 aa12.73□□□□□ -0.37
FARP1-220ENST00000596613 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
FARP1-220ENST00000596613 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
FARP1-220ENST00000596613 RIMS1Q86UR5 1692 aaKnown RBP12.73□□□□□ -0.37
FARP1-220ENST00000596613 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
FARP1-220ENST00000596613 MAP3K1Q13233 1512 aa12.72□□□□□ -0.37
FARP1-220ENST00000596613 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.37
FARP1-220ENST00000596613 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
FARP1-220ENST00000596613 KANK4Q5T7N3 995 aaPredicted RBP12.71□□□□□ -0.37
FARP1-220ENST00000596613 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
FARP1-220ENST00000596613 REREQ9P2R6 1566 aa12.7□□□□□ -0.38
FARP1-220ENST00000596613 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
FARP1-220ENST00000596613 RTEL1-TNFRSF6BF6WH68 1400 aa12.7□□□□□ -0.38
FARP1-220ENST00000596613 DIP2CQ9Y2E4 1556 aa12.69□□□□□ -0.38
FARP1-220ENST00000596613 FER1L4A9Z1Z3 1794 aa12.69□□□□□ -0.38
FARP1-220ENST00000596613 AGLP35573 1532 aa12.69□□□□□ -0.38
FARP1-220ENST00000596613 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
FARP1-220ENST00000596613 A2MP01023 1474 aa12.69□□□□□ -0.38
FARP1-220ENST00000596613 ATP7AQ04656 1500 aa12.68□□□□□ -0.38
FARP1-220ENST00000596613 KIF3BO15066 747 aa12.68□□□□□ -0.38
FARP1-220ENST00000596613 CCDC141Q6ZP82 1450 aa12.67□□□□□ -0.38
FARP1-220ENST00000596613 KIDINS220Q9ULH0 1771 aa12.67□□□□□ -0.38
FARP1-220ENST00000596613 MIA2Q96PC5 1412 aa12.67□□□□□ -0.38
FARP1-220ENST00000596613 DHX29Q7Z478 1369 aaKnown RBP12.67□□□□□ -0.38
FARP1-220ENST00000596613 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
FARP1-220ENST00000596613 CAMSAP2Q08AD1 1489 aa12.66□□□□□ -0.38
FARP1-220ENST00000596613 TK2O00142 265 aa12.66□□□□□ -0.38
FARP1-220ENST00000596613 MBD5Q9P267 1494 aa12.65□□□□□ -0.38
FARP1-220ENST00000596613 UHRF1BP1Q6BDS2 1440 aa12.65□□□□□ -0.38
FARP1-220ENST00000596613 EVI5O60447 810 aa12.65□□□□□ -0.38
FARP1-220ENST00000596613 HSPA2P54652 639 aa12.65□□□□□ -0.38
FARP1-220ENST00000596613 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
FARP1-220ENST00000596613 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
FARP1-220ENST00000596613 MYOM3Q5VTT5 1437 aa12.64□□□□□ -0.39
FARP1-220ENST00000596613 GRXCR2A6NFK2 248 aa12.64□□□□□ -0.39
FARP1-220ENST00000596613 ZMYM3Q14202 1370 aa12.64□□□□□ -0.39
FARP1-220ENST00000596613 GPIHBP1Q8IV16 184 aa12.63□□□□□ -0.39
FARP1-220ENST00000596613 ADGBQ8N7X0 1667 aa12.63□□□□□ -0.39
FARP1-220ENST00000596613 SETD1BQ9UPS6 1966 aaKnown RBP12.63□□□□□ -0.39
FARP1-220ENST00000596613 ZMYND10O75800 440 aa12.62□□□□□ -0.39
FARP1-220ENST00000596613 FAM50AQ14320 339 aaKnown RBP12.62□□□□□ -0.39
FARP1-220ENST00000596613 SIGLEC1Q9BZZ2 1709 aa12.61□□□□□ -0.39
FARP1-220ENST00000596613 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
FARP1-220ENST00000596613 LMTK3Q96Q04 1460 aa12.6□□□□□ -0.39
FARP1-220ENST00000596613 DDX12PQ92771 950 aa12.6□□□□□ -0.39
FARP1-220ENST00000596613 ARHGEF5Q12774 1597 aa12.6□□□□□ -0.39
FARP1-220ENST00000596613 OSBPP22059 807 aa12.58□□□□□ -0.4
FARP1-220ENST00000596613 PSEN2P49810 448 aa12.58□□□□□ -0.4
FARP1-220ENST00000596613 ANO8Q9HCE9 1232 aaPredicted RBP12.58□□□□□ -0.4
FARP1-220ENST00000596613 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.4
FARP1-220ENST00000596613 NPATQ14207 1427 aa12.57□□□□□ -0.4
FARP1-220ENST00000596613 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
FARP1-220ENST00000596613 STAC3Q96MF2 364 aa12.57□□□□□ -0.4
FARP1-220ENST00000596613 PREX1Q8TCU6 1659 aa12.57□□□□□ -0.4
FARP1-220ENST00000596613 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
FARP1-220ENST00000596613 SLC24A3Q9HC58 644 aa12.56□□□□□ -0.4
FARP1-220ENST00000596613 CHIC2Q9UKJ5 165 aa12.56□□□□□ -0.4
FARP1-220ENST00000596613 DMRTA1Q5VZB9 504 aa12.55□□□□□ -0.4
FARP1-220ENST00000596613 BARGINQ6ZT62 677 aa12.55□□□□□ -0.4
FARP1-220ENST00000596613 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
FARP1-220ENST00000596613 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
FARP1-220ENST00000596613 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
FARP1-220ENST00000596613 KANK1Q14678 1352 aa12.55□□□□□ -0.4
FARP1-220ENST00000596613 C3P01024 1663 aa12.54□□□□□ -0.4
FARP1-220ENST00000596613 FGD6Q6ZV73 1430 aa12.54□□□□□ -0.4
FARP1-220ENST00000596613 FOSBP53539 338 aa12.54□□□□□ -0.4
FARP1-220ENST00000596613 PLXNC1O60486 1568 aa12.54□□□□□ -0.4
FARP1-220ENST00000596613 MROH2AA6NES4 1674 aa12.54□□□□□ -0.4
FARP1-220ENST00000596613 PTPN23Q9H3S7 1636 aa12.53□□□□□ -0.4
FARP1-220ENST00000596613 HRO43593 1189 aa12.53□□□□□ -0.4
FARP1-220ENST00000596613 CLTCQ00610 1675 aaKnown RBP12.53□□□□□ -0.4
FARP1-220ENST00000596613 THEMISQ8N1K5 641 aaPredicted RBP12.52□□□□□ -0.41
FARP1-220ENST00000596613 FBXO41Q8TF61 875 aa12.52□□□□□ -0.41
FARP1-220ENST00000596613 KIF15Q9NS87 1388 aa12.52□□□□□ -0.41
FARP1-220ENST00000596613 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
FARP1-220ENST00000596613 GPR37O15354 613 aa12.51□□□□□ -0.41
FARP1-220ENST00000596613 PTPREP23469 700 aa12.51□□□□□ -0.41
FARP1-220ENST00000596613 ABCC5O15440 1437 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms