RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 CEP170BQ9Y4F5 1589 aaPredicted RBP8.21□□□□□ -1.1
SDF2-206ENST00000587788 ROCK1Q13464 1354 aa8.21□□□□□ -1.1
SDF2-206ENST00000587788 ANKRD30AQ9BXX3 1397 aa8.21□□□□□ -1.1
SDF2-206ENST00000587788 PZPP20742 1482 aa8.2□□□□□ -1.1
SDF2-206ENST00000587788 HSPA2P54652 639 aa8.2□□□□□ -1.1
SDF2-206ENST00000587788 POLR1AO95602 1720 aaPredicted RBP8.2□□□□□ -1.1
SDF2-206ENST00000587788 NPATQ14207 1427 aa8.2□□□□□ -1.1
SDF2-206ENST00000587788 MYO5BQ9ULV0 1848 aa8.19□□□□□ -1.1
SDF2-206ENST00000587788 TET3O43151 1660 aa8.19□□□□□ -1.1
SDF2-206ENST00000587788 ASTLQ6HA08 431 aaPredicted RBP8.19□□□□□ -1.1
SDF2-206ENST00000587788 ESF1Q9H501 851 aaKnown RBP8.19□□□□□ -1.1
SDF2-206ENST00000587788 UHRF1BP1Q6BDS2 1440 aa8.19□□□□□ -1.1
SDF2-206ENST00000587788 SPATA31D1Q6ZQQ2 1576 aa8.18□□□□□ -1.1
SDF2-206ENST00000587788 IQGAP3Q86VI3 1631 aa8.18□□□□□ -1.1
SDF2-206ENST00000587788 E9PCH4 1651 aa8.18□□□□□ -1.1
SDF2-206ENST00000587788 E2F4Q16254 413 aa8.18□□□□□ -1.1
SDF2-206ENST00000587788 ARHGEF1Q92888 912 aaKnown RBP8.18□□□□□ -1.1
SDF2-206ENST00000587788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.18□□□□□ -1.1
SDF2-206ENST00000587788 ANKRD50Q9ULJ7 1429 aa8.18□□□□□ -1.1
SDF2-206ENST00000587788 EFCAB6Q5THR3 1501 aa8.18□□□□□ -1.1
SDF2-206ENST00000587788 UBR1Q8IWV7 1749 aa8.17□□□□□ -1.1
SDF2-206ENST00000587788 ATMINO43313 823 aaPredicted RBP8.17□□□□□ -1.1
SDF2-206ENST00000587788 PDE4AP27815 886 aa8.17□□□□□ -1.1
SDF2-206ENST00000587788 ATN1P54259 1190 aaPredicted RBP8.17□□□□□ -1.1
SDF2-206ENST00000587788 FBXO31Q5XUX0 539 aaPredicted RBP8.17□□□□□ -1.1
SDF2-206ENST00000587788 PDCD7Q8N8D1 485 aaKnown RBP8.17□□□□□ -1.1
SDF2-206ENST00000587788 WASHC2CQ9Y4E1 1318 aa8.17□□□□□ -1.1
SDF2-206ENST00000587788 NAIPQ13075 1403 aa8.17□□□□□ -1.1
SDF2-206ENST00000587788 LMTK2Q8IWU2 1503 aa8.17□□□□□ -1.1
SDF2-206ENST00000587788 SYNMO15061 1565 aa8.17□□□□□ -1.1
SDF2-206ENST00000587788 PIK3C2BO00750 1634 aa8.16□□□□□ -1.1
SDF2-206ENST00000587788 ERVK-7P63135 1459 aa8.16□□□□□ -1.1
SDF2-206ENST00000587788 IER5LQ5T953 404 aa8.16□□□□□ -1.1
SDF2-206ENST00000587788 ARIH1Q9Y4X5 557 aaPredicted RBP8.16□□□□□ -1.1
SDF2-206ENST00000587788 IRX5P78411 483 aaPredicted RBP8.15□□□□□ -1.1
SDF2-206ENST00000587788 CAMK2BQ13554 666 aa8.15□□□□□ -1.1
SDF2-206ENST00000587788 TRIM52Q96A61 297 aa8.15□□□□□ -1.1
SDF2-206ENST00000587788 A2ML1A8K2U0 1454 aa8.14□□□□□ -1.11
SDF2-206ENST00000587788 TNRQ92752 1358 aa8.14□□□□□ -1.11
SDF2-206ENST00000587788 LARP6Q9BRS8 491 aaKnown RBP8.14□□□□□ -1.11
SDF2-206ENST00000587788 SPHKAPQ2M3C7 1700 aa8.14□□□□□ -1.11
SDF2-206ENST00000587788 NEURL4Q96JN8 1562 aa8.14□□□□□ -1.11
SDF2-206ENST00000587788 ARHGAP31Q2M1Z3 1444 aa8.13□□□□□ -1.11
SDF2-206ENST00000587788 PPP1R15AO75807 674 aaPredicted RBP8.13□□□□□ -1.11
SDF2-206ENST00000587788 DPY19L2Q6NUT2 758 aa8.13□□□□□ -1.11
SDF2-206ENST00000587788 DDX27Q96GQ7 796 aaKnown RBP8.13□□□□□ -1.11
SDF2-206ENST00000587788 KDM5AP29375 1690 aaKnown RBP8.13□□□□□ -1.11
SDF2-206ENST00000587788 UGGT1Q9NYU2 1555 aa8.13□□□□□ -1.11
SDF2-206ENST00000587788 NEUROD1Q13562 356 aa8.12□□□□□ -1.11
SDF2-206ENST00000587788 MICALL2Q8IY33 904 aa8.12□□□□□ -1.11
SDF2-206ENST00000587788 MPHOSPH9Q99550 1183 aa8.12□□□□□ -1.11
SDF2-206ENST00000587788 TMEM121BQ9BXQ6 578 aaPredicted RBP8.12□□□□□ -1.11
SDF2-206ENST00000587788 NLRP1Q9C000 1473 aa8.12□□□□□ -1.11
SDF2-206ENST00000587788 KANK1Q14678 1352 aa8.11□□□□□ -1.11
SDF2-206ENST00000587788 TONSLQ96HA7 1378 aa8.11□□□□□ -1.11
SDF2-206ENST00000587788 GABBR2O75899 941 aa8.11□□□□□ -1.11
SDF2-206ENST00000587788 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
SDF2-206ENST00000587788 PLA2R1Q13018 1463 aa8.11□□□□□ -1.11
SDF2-206ENST00000587788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.1□□□□□ -1.11
SDF2-206ENST00000587788 SIN3AQ96ST3 1273 aa8.1□□□□□ -1.11
SDF2-206ENST00000587788 OCEL1Q9H607 264 aa8.1□□□□□ -1.11
SDF2-206ENST00000587788 IQGAP1P46940 1657 aa8.1□□□□□ -1.11
SDF2-206ENST00000587788 NOS1P29475 1434 aa8.1□□□□□ -1.11
SDF2-206ENST00000587788 TMEM131LA2VDJ0 1609 aa8.1□□□□□ -1.11
SDF2-206ENST00000587788 STRCP1A6NGW2 1772 aa8.1□□□□□ -1.11
SDF2-206ENST00000587788 ADGRB3O60242 1522 aa8.09□□□□□ -1.11
SDF2-206ENST00000587788 RPRD2Q5VT52 1461 aaKnown RBP8.09□□□□□ -1.11
SDF2-206ENST00000587788 TESPA1A2RU30 521 aaPredicted RBP8.09□□□□□ -1.11
SDF2-206ENST00000587788 CLTCL1P53675 1640 aa8.08□□□□□ -1.12
SDF2-206ENST00000587788 NUP155O75694 1391 aa8.08□□□□□ -1.12
SDF2-206ENST00000587788 KIF1BO60333 1816 aa8.08□□□□□ -1.12
SDF2-206ENST00000587788 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
SDF2-206ENST00000587788 PTPRTO14522 1441 aa8.07□□□□□ -1.12
SDF2-206ENST00000587788 PPP1R15BQ5SWA1 713 aa8.07□□□□□ -1.12
SDF2-206ENST00000587788 LMOD2Q6P5Q4 547 aa8.07□□□□□ -1.12
SDF2-206ENST00000587788 SLIT1O75093 1534 aa8.07□□□□□ -1.12
SDF2-206ENST00000587788 ARHGAP23Q9P227 1491 aa8.06□□□□□ -1.12
SDF2-206ENST00000587788 KIF3CO14782 793 aa8.06□□□□□ -1.12
SDF2-206ENST00000587788 SEMA3EO15041 775 aa8.06□□□□□ -1.12
SDF2-206ENST00000587788 POTEHQ6S545 545 aa8.06□□□□□ -1.12
SDF2-206ENST00000587788 BOLA1Q9Y3E2 137 aa8.06□□□□□ -1.12
SDF2-206ENST00000587788 PELP1Q8IZL8 1130 aaKnown RBP8.05□□□□□ -1.12
SDF2-206ENST00000587788 XIRP1Q702N8 1843 aaKnown RBP8.05□□□□□ -1.12
SDF2-206ENST00000587788 TRPM2O94759 1503 aa8.04□□□□□ -1.12
SDF2-206ENST00000587788 FOXK1P85037 733 aa8.04□□□□□ -1.12
SDF2-206ENST00000587788 IDI1Q13907 227 aa8.04□□□□□ -1.12
SDF2-206ENST00000587788 DSG2Q14126 1118 aa8.04□□□□□ -1.12
SDF2-206ENST00000587788 GTF3C3Q9Y5Q9 886 aa8.04□□□□□ -1.12
SDF2-206ENST00000587788 MED14O60244 1454 aa8.04□□□□□ -1.12
SDF2-206ENST00000587788 SCAF11Q99590 1463 aaKnown RBP8.03□□□□□ -1.12
SDF2-206ENST00000587788 PLCG2P16885 1265 aa8.03□□□□□ -1.12
SDF2-206ENST00000587788 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
SDF2-206ENST00000587788 IFT172Q9UG01 1749 aa8.03□□□□□ -1.12
SDF2-206ENST00000587788 NPHP4O75161 1426 aaPredicted RBP8.03□□□□□ -1.12
SDF2-206ENST00000587788 PPLO60437 1756 aa8.02□□□□□ -1.13
SDF2-206ENST00000587788 CCER2I3L3R5 266 aa8.02□□□□□ -1.13
SDF2-206ENST00000587788 THEMISQ8N1K5 641 aaPredicted RBP8.02□□□□□ -1.13
SDF2-206ENST00000587788 EMILIN3Q9NT22 766 aa8.02□□□□□ -1.13
SDF2-206ENST00000587788 COLQQ9Y215 455 aaPredicted RBP8.02□□□□□ -1.13
SDF2-206ENST00000587788 NRXN3Q9Y4C0 1643 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms