RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 WAPLQ7Z5K2 1190 aa20.34■□□□□ 0.85
CDK5RAP3-236ENST00000584991 MINK1Q8N4C8 1332 aaPredicted RBP20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 TECPR2O15040 1411 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 TULP4Q9NRJ4 1543 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 EVC2Q86UK5 1308 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 PTPRUQ92729 1446 aa20.32■□□□□ 0.84
CDK5RAP3-236ENST00000584991 CPS1P31327 1500 aa20.31■□□□□ 0.84
CDK5RAP3-236ENST00000584991 MYOM1P52179 1685 aa20.31■□□□□ 0.84
CDK5RAP3-236ENST00000584991 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
CDK5RAP3-236ENST00000584991 PANK3Q9H999 370 aa20.29■□□□□ 0.84
CDK5RAP3-236ENST00000584991 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 NCKAP5LQ9HCH0 1330 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 ROBO2Q9HCK4 1378 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 AMOTL2Q9Y2J4 779 aa20.28■□□□□ 0.84
CDK5RAP3-236ENST00000584991 NPHP4O75161 1426 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-236ENST00000584991 CABP2Q9NPB3 220 aa20.26■□□□□ 0.83
CDK5RAP3-236ENST00000584991 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PUS7Q96PZ0 661 aaKnown RBP20.25■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PIK3R4Q99570 1358 aa20.25■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PER1O15534 1290 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 SRPK2P78362 688 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 XRN1Q8IZH2 1706 aaKnown RBP20.24■□□□□ 0.83
CDK5RAP3-236ENST00000584991 HSPA2P54652 639 aa20.23■□□□□ 0.83
CDK5RAP3-236ENST00000584991 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
CDK5RAP3-236ENST00000584991 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
CDK5RAP3-236ENST00000584991 TMC1Q8TDI8 760 aa20.22■□□□□ 0.83
CDK5RAP3-236ENST00000584991 PTCH1Q13635 1447 aa20.21■□□□□ 0.83
CDK5RAP3-236ENST00000584991 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.83
CDK5RAP3-236ENST00000584991 SLC12A5Q9H2X9 1139 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 LMTK3Q96Q04 1460 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 KCNA6P17658 529 aa20.2■□□□□ 0.82
CDK5RAP3-236ENST00000584991 KTN1Q86UP2 1357 aaKnown RBP20.18■□□□□ 0.82
CDK5RAP3-236ENST00000584991 ATAD2Q6PL18 1390 aa20.18■□□□□ 0.82
CDK5RAP3-236ENST00000584991 WASLO00401 505 aaPredicted RBP20.18■□□□□ 0.82
CDK5RAP3-236ENST00000584991 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
CDK5RAP3-236ENST00000584991 ADGRB2O60241 1585 aa20.15■□□□□ 0.82
CDK5RAP3-236ENST00000584991 CARD14Q9BXL6 1004 aa20.14■□□□□ 0.81
CDK5RAP3-236ENST00000584991 CCDC184Q52MB2 194 aa20.13■□□□□ 0.81
CDK5RAP3-236ENST00000584991 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NINLQ9Y2I6 1382 aa20.13■□□□□ 0.81
CDK5RAP3-236ENST00000584991 PPP4R2Q9NY27 417 aa20.12■□□□□ 0.81
CDK5RAP3-236ENST00000584991 STRCQ7RTU9 1775 aa20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 ANKRD36BQ8N2N9 1353 aa20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 RALBP1Q15311 655 aa20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
CDK5RAP3-236ENST00000584991 FAM9BQ8IZU0 186 aa20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NUDT16Q96DE0 195 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 CABP1Q9NZU7 370 aa20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 RBM19Q9Y4C8 960 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 PARD3Q8TEW0 1356 aa20.1■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NSD3Q9BZ95 1437 aa20.09■□□□□ 0.81
CDK5RAP3-236ENST00000584991 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
CDK5RAP3-236ENST00000584991 A0A1W2PP64 1363 aa20.08■□□□□ 0.8
CDK5RAP3-236ENST00000584991 SMG6Q86US8 1419 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 PRR36Q9H6K5 1346 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 CD163L1Q9NR16 1453 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 RBM33Q96EV2 1170 aaKnown RBP20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 ANP32EQ9BTT0 268 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
CDK5RAP3-236ENST00000584991 ATP7BP35670 1465 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 PPIP5K1Q6PFW1 1433 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 NPC1L1Q9UHC9 1359 aa20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 MYBBP1AQ9BQG0 1328 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-236ENST00000584991 NALCNQ8IZF0 1738 aa20.05■□□□□ 0.8
CDK5RAP3-236ENST00000584991 CCDC61Q9Y6R9 512 aa20.05■□□□□ 0.8
CDK5RAP3-236ENST00000584991 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
CDK5RAP3-236ENST00000584991 USP32Q8NFA0 1604 aa20.03■□□□□ 0.8
CDK5RAP3-236ENST00000584991 STRCP1A6NGW2 1772 aa20.03■□□□□ 0.8
CDK5RAP3-236ENST00000584991 RGPD8O14715 1765 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-236ENST00000584991 PROSER2Q86WR7 435 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-236ENST00000584991 TOPAZ1Q8N9V7 1692 aa20.02■□□□□ 0.79
CDK5RAP3-236ENST00000584991 CGNL1Q0VF96 1302 aa20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 FMN2Q9NZ56 1722 aa20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 BRD4O60885 1362 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-236ENST00000584991 CDC42BPGQ6DT37 1551 aa20■□□□□ 0.79
CDK5RAP3-236ENST00000584991 ADGRL3Q9HAR2 1447 aa20■□□□□ 0.79
CDK5RAP3-236ENST00000584991 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
CDK5RAP3-236ENST00000584991 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
CDK5RAP3-236ENST00000584991 CPSF1Q10570 1443 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-236ENST00000584991 AKAP12Q02952 1782 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 NLRP13Q86W25 1043 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 RNF123Q5XPI4 1314 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
CDK5RAP3-236ENST00000584991 PLEKHG3A1L390 1219 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 PPP2R1AP30153 589 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 NUDCQ9Y266 331 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 ANKARQ7Z5J8 1434 aa19.96■□□□□ 0.79
CDK5RAP3-236ENST00000584991 MON2Q7Z3U7 1717 aa19.95■□□□□ 0.78
CDK5RAP3-236ENST00000584991 MORC1Q86VD1 984 aa19.95■□□□□ 0.78
CDK5RAP3-236ENST00000584991 NSD2O96028 1365 aa19.95■□□□□ 0.78
CDK5RAP3-236ENST00000584991 ACEP12821 1306 aa19.94■□□□□ 0.78
CDK5RAP3-236ENST00000584991 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
CDK5RAP3-236ENST00000584991 INSRP06213 1382 aa19.94■□□□□ 0.78
CDK5RAP3-236ENST00000584991 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms