RNA–Protein interactions for RNA: ENST00000581093.1

SENP3-206, Transcript of SUMO specific peptidase 3, humanhuman

TSL 5

Gene SENP3, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-206ENST00000581093 MIA2Q96PC5 1412 aa9.65□□□□□ -0.86
SENP3-206ENST00000581093 MEX3CQ5U5Q3 659 aaKnown RBP9.65□□□□□ -0.86
SENP3-206ENST00000581093 SGIP1Q9BQI5 828 aa9.65□□□□□ -0.86
SENP3-206ENST00000581093 KDM5DQ9BY66 1539 aa9.65□□□□□ -0.86
SENP3-206ENST00000581093 ZC3H13Q5T200 1668 aaKnown RBP9.64□□□□□ -0.87
SENP3-206ENST00000581093 PHLPP1O60346 1717 aa9.63□□□□□ -0.87
SENP3-206ENST00000581093 HNRNPMP52272 730 aaKnown RBP eCLIP9.63□□□□□ -0.87
SENP3-206ENST00000581093 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
SENP3-206ENST00000581093 LRP6O75581 1613 aa9.63□□□□□ -0.87
SENP3-206ENST00000581093 INO80Q9ULG1 1556 aaPredicted RBP9.63□□□□□ -0.87
SENP3-206ENST00000581093 SYCP2Q9BX26 1530 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 LRRC9Q6ZRR7 1453 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 AAMPQ13685 434 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 OCEL1Q9H607 264 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 FMN1Q68DA7 1419 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 SETBP1Q9Y6X0 1596 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 CDC42BPAQ5VT25 1732 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 TMEM94Q12767 1356 aa9.62□□□□□ -0.87
SENP3-206ENST00000581093 ADGBQ8N7X0 1667 aa9.61□□□□□ -0.87
SENP3-206ENST00000581093 IFNL1Q8IU54 200 aa9.6□□□□□ -0.87
SENP3-206ENST00000581093 ARID3AQ99856 593 aa9.6□□□□□ -0.87
SENP3-206ENST00000581093 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
SENP3-206ENST00000581093 SLAIN2Q9P270 581 aa9.59□□□□□ -0.87
SENP3-206ENST00000581093 SCAF11Q99590 1463 aaKnown RBP9.59□□□□□ -0.87
SENP3-206ENST00000581093 WASHC2CQ9Y4E1 1318 aa9.58□□□□□ -0.88
SENP3-206ENST00000581093 FGD6Q6ZV73 1430 aa9.58□□□□□ -0.88
SENP3-206ENST00000581093 KIAA1107Q9UPP5 1409 aa9.58□□□□□ -0.88
SENP3-206ENST00000581093 COL16A1Q07092 1604 aaPredicted RBP9.58□□□□□ -0.88
SENP3-206ENST00000581093 NUTM2BA6NNL0 878 aaPredicted RBP9.58□□□□□ -0.88
SENP3-206ENST00000581093 NUTM2EB1AL46 878 aaPredicted RBP9.58□□□□□ -0.88
SENP3-206ENST00000581093 NUTM2DQ5VT03 806 aaPredicted RBP9.58□□□□□ -0.88
SENP3-206ENST00000581093 NUTM2AQ8IVF1 878 aaPredicted RBP9.58□□□□□ -0.88
SENP3-206ENST00000581093 EP400Q96L91 3159 aa9.58□□□□□ -0.88
SENP3-206ENST00000581093 CLSPNQ9HAW4 1339 aa9.57□□□□□ -0.88
SENP3-206ENST00000581093 MAP3K1Q13233 1512 aa9.57□□□□□ -0.88
SENP3-206ENST00000581093 LRRIQ1Q96JM4 1722 aa9.57□□□□□ -0.88
SENP3-206ENST00000581093 LTKP29376 864 aa9.57□□□□□ -0.88
SENP3-206ENST00000581093 ZEB1P37275 1124 aaPredicted RBP9.57□□□□□ -0.88
SENP3-206ENST00000581093 RGS12O14924 1447 aa9.56□□□□□ -0.88
SENP3-206ENST00000581093 PLEKHH2Q8IVE3 1493 aa9.56□□□□□ -0.88
SENP3-206ENST00000581093 DHX29Q7Z478 1369 aaKnown RBP9.56□□□□□ -0.88
SENP3-206ENST00000581093 KIF3BO15066 747 aa9.56□□□□□ -0.88
SENP3-206ENST00000581093 TXNDC2Q86VQ3 553 aa9.56□□□□□ -0.88
SENP3-206ENST00000581093 PROSER2Q86WR7 435 aaPredicted RBP9.56□□□□□ -0.88
SENP3-206ENST00000581093 POLR3GLQ9BT43 218 aa9.56□□□□□ -0.88
SENP3-206ENST00000581093 ATAD2Q6PL18 1390 aa9.55□□□□□ -0.88
SENP3-206ENST00000581093 KCNA6P17658 529 aa9.55□□□□□ -0.88
SENP3-206ENST00000581093 RBM6P78332 1123 aaKnown RBP9.55□□□□□ -0.88
SENP3-206ENST00000581093 C3orf67Q6ZVT6 689 aa9.55□□□□□ -0.88
SENP3-206ENST00000581093 AFF2P51816 1311 aa9.55□□□□□ -0.88
SENP3-206ENST00000581093 MSH6P52701 1360 aa9.54□□□□□ -0.88
SENP3-206ENST00000581093 TICAM2Q86XR7 235 aa9.54□□□□□ -0.88
SENP3-206ENST00000581093 GPATCH8Q9UKJ3 1502 aaKnown RBP9.54□□□□□ -0.88
SENP3-206ENST00000581093 SHPRHQ149N8 1683 aa9.54□□□□□ -0.88
SENP3-206ENST00000581093 UBR1Q8IWV7 1749 aa9.53□□□□□ -0.88
SENP3-206ENST00000581093 NAP1L5Q96NT1 182 aaPredicted RBP9.53□□□□□ -0.88
SENP3-206ENST00000581093 QTRT2Q9H974 415 aaKnown RBP9.53□□□□□ -0.88
SENP3-206ENST00000581093 EID1Q9Y6B2 187 aa9.53□□□□□ -0.88
SENP3-206ENST00000581093 ARHGAP23Q9P227 1491 aa9.53□□□□□ -0.88
SENP3-206ENST00000581093 PRDM15P57071 1507 aaPredicted RBP9.52□□□□□ -0.88
SENP3-206ENST00000581093 RTEL1-TNFRSF6BF6WH68 1400 aa9.52□□□□□ -0.89
SENP3-206ENST00000581093 FKBP8Q14318 412 aa9.52□□□□□ -0.89
SENP3-206ENST00000581093 CFDP1Q9UEE9 299 aaPredicted RBP9.52□□□□□ -0.89
SENP3-206ENST00000581093 SLIT1O75093 1534 aa9.51□□□□□ -0.89
SENP3-206ENST00000581093 TIAM1Q13009 1591 aa9.51□□□□□ -0.89
SENP3-206ENST00000581093 CFAP65Q6ZU64 1925 aaKnown RBP9.51□□□□□ -0.89
SENP3-206ENST00000581093 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
SENP3-206ENST00000581093 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.51□□□□□ -0.89
SENP3-206ENST00000581093 NCOA2Q15596 1464 aa9.51□□□□□ -0.89
SENP3-206ENST00000581093 ZBTB7CA1YPR0 619 aa9.5□□□□□ -0.89
SENP3-206ENST00000581093 CCDC125Q86Z20 511 aa9.5□□□□□ -0.89
SENP3-206ENST00000581093 NGLY1Q96IV0 654 aa9.5□□□□□ -0.89
SENP3-206ENST00000581093 ARHGAP35Q9NRY4 1499 aa9.5□□□□□ -0.89
SENP3-206ENST00000581093 ABCC3O15438 1527 aa9.5□□□□□ -0.89
SENP3-206ENST00000581093 LRP5O75197 1615 aa9.49□□□□□ -0.89
SENP3-206ENST00000581093 NKTRP30414 1462 aaKnown RBP9.49□□□□□ -0.89
SENP3-206ENST00000581093 ERVK-7P63135 1459 aa9.49□□□□□ -0.89
SENP3-206ENST00000581093 CCDC18Q5T9S5 1454 aa9.49□□□□□ -0.89
SENP3-206ENST00000581093 CLSTN1O94985 981 aa9.49□□□□□ -0.89
SENP3-206ENST00000581093 AHDC1Q5TGY3 1603 aaPredicted RBP9.49□□□□□ -0.89
SENP3-206ENST00000581093 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.48□□□□□ -0.89
SENP3-206ENST00000581093 CCDC136Q96JN2 1154 aa9.47□□□□□ -0.89
SENP3-206ENST00000581093 C8orf37Q96NL8 207 aa9.47□□□□□ -0.89
SENP3-206ENST00000581093 SLC26A8Q96RN1 970 aa9.47□□□□□ -0.89
SENP3-206ENST00000581093 MBD5Q9P267 1494 aa9.47□□□□□ -0.89
SENP3-206ENST00000581093 GLIPR1L2Q4G1C9 344 aa9.46□□□□□ -0.9
SENP3-206ENST00000581093 ZNF644Q9H582 1327 aaPredicted RBP9.46□□□□□ -0.9
SENP3-206ENST00000581093 TMEM2Q9UHN6 1383 aa9.46□□□□□ -0.9
SENP3-206ENST00000581093 EEA1Q15075 1411 aa9.46□□□□□ -0.9
SENP3-206ENST00000581093 NWD1Q149M9 1564 aa9.46□□□□□ -0.9
SENP3-206ENST00000581093 KDM5AP29375 1690 aaKnown RBP9.45□□□□□ -0.9
SENP3-206ENST00000581093 CCNB3Q8WWL7 1395 aa9.45□□□□□ -0.9
SENP3-206ENST00000581093 DIP2AQ14689 1571 aa9.45□□□□□ -0.9
SENP3-206ENST00000581093 TET3O43151 1660 aa9.45□□□□□ -0.9
SENP3-206ENST00000581093 NBR1Q14596 966 aa9.44□□□□□ -0.9
SENP3-206ENST00000581093 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
SENP3-206ENST00000581093 CASKIN1Q8WXD9 1431 aa9.44□□□□□ -0.9
SENP3-206ENST00000581093 ERBB3P21860 1342 aa9.43□□□□□ -0.9
SENP3-206ENST00000581093 YY1P25490 414 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms