RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 UBR1Q8IWV7 1749 aa7.26□□□□□ -1.25
LINC01541-202ENST00000568095 NRXN3Q9Y4C0 1643 aa7.26□□□□□ -1.25
LINC01541-202ENST00000568095 NEFMP07197 916 aa7.25□□□□□ -1.25
LINC01541-202ENST00000568095 ADGRB1O14514 1584 aa7.25□□□□□ -1.25
LINC01541-202ENST00000568095 ZNF142P52746 1687 aaPredicted RBP7.25□□□□□ -1.25
LINC01541-202ENST00000568095 ARID4BQ4LE39 1312 aaPredicted RBP7.25□□□□□ -1.25
LINC01541-202ENST00000568095 PDE4AP27815 886 aa7.25□□□□□ -1.25
LINC01541-202ENST00000568095 GSE1Q14687 1217 aa7.24□□□□□ -1.25
LINC01541-202ENST00000568095 ASXL1Q8IXJ9 1541 aa7.24□□□□□ -1.25
LINC01541-202ENST00000568095 POTEHQ6S545 545 aa7.23□□□□□ -1.25
LINC01541-202ENST00000568095 PNISRQ8TF01 805 aaKnown RBP7.23□□□□□ -1.25
LINC01541-202ENST00000568095 PIK3C2GO75747 1445 aa7.23□□□□□ -1.25
LINC01541-202ENST00000568095 ARHGEF28Q8N1W1 1705 aaKnown RBP7.23□□□□□ -1.25
LINC01541-202ENST00000568095 ZFYVE9O95405 1425 aa7.23□□□□□ -1.25
LINC01541-202ENST00000568095 MYOM1P52179 1685 aa7.23□□□□□ -1.25
LINC01541-202ENST00000568095 ECM2O94769 699 aaPredicted RBP7.22□□□□□ -1.25
LINC01541-202ENST00000568095 C1QBPQ07021 282 aaKnown RBP7.22□□□□□ -1.25
LINC01541-202ENST00000568095 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC01541-202ENST00000568095 KTN1Q86UP2 1357 aaKnown RBP7.22□□□□□ -1.25
LINC01541-202ENST00000568095 RRP1P56182 461 aaKnown RBP7.22□□□□□ -1.25
LINC01541-202ENST00000568095 INSRP06213 1382 aa7.21□□□□□ -1.25
LINC01541-202ENST00000568095 KNDC1Q76NI1 1749 aa7.21□□□□□ -1.25
LINC01541-202ENST00000568095 BRPF3Q9ULD4 1205 aa7.21□□□□□ -1.25
LINC01541-202ENST00000568095 DDRGK1Q96HY6 314 aa7.21□□□□□ -1.26
LINC01541-202ENST00000568095 A2ML1A8K2U0 1454 aa7.2□□□□□ -1.26
LINC01541-202ENST00000568095 FAM43AQ8N2R8 423 aa7.2□□□□□ -1.26
LINC01541-202ENST00000568095 RSPH6AQ9H0K4 717 aa7.2□□□□□ -1.26
LINC01541-202ENST00000568095 LAS1LQ9Y4W2 734 aaKnown RBP7.2□□□□□ -1.26
LINC01541-202ENST00000568095 RIMS1Q86UR5 1692 aaKnown RBP7.2□□□□□ -1.26
LINC01541-202ENST00000568095 SPDYE4A6NLX3 237 aa7.19□□□□□ -1.26
LINC01541-202ENST00000568095 ATF5Q9Y2D1 282 aaPredicted RBP7.19□□□□□ -1.26
LINC01541-202ENST00000568095 BRD4O60885 1362 aaPredicted RBP7.19□□□□□ -1.26
LINC01541-202ENST00000568095 ROCK2O75116 1388 aaKnown RBP7.19□□□□□ -1.26
LINC01541-202ENST00000568095 NFKBIBQ15653 356 aa7.19□□□□□ -1.26
LINC01541-202ENST00000568095 VIRMAQ69YN4 1812 aaKnown RBP7.19□□□□□ -1.26
LINC01541-202ENST00000568095 QRICH2Q9H0J4 1663 aa7.19□□□□□ -1.26
LINC01541-202ENST00000568095 EXOC6Q8TAG9 804 aa7.18□□□□□ -1.26
LINC01541-202ENST00000568095 STAC3Q96MF2 364 aa7.18□□□□□ -1.26
LINC01541-202ENST00000568095 PTPRMP28827 1452 aa7.18□□□□□ -1.26
LINC01541-202ENST00000568095 SLIT1O75093 1534 aa7.18□□□□□ -1.26
LINC01541-202ENST00000568095 USP47Q96K76 1375 aa7.18□□□□□ -1.26
LINC01541-202ENST00000568095 FRAT1Q92837 279 aaPredicted RBP7.18□□□□□ -1.26
LINC01541-202ENST00000568095 PDE3BQ13370 1112 aa7.17□□□□□ -1.26
LINC01541-202ENST00000568095 GGT6Q6P531 493 aa7.17□□□□□ -1.26
LINC01541-202ENST00000568095 ARHGAP23Q9P227 1491 aa7.17□□□□□ -1.26
LINC01541-202ENST00000568095 ZMYM3Q14202 1370 aa7.17□□□□□ -1.26
LINC01541-202ENST00000568095 NLRP1Q9C000 1473 aa7.17□□□□□ -1.26
LINC01541-202ENST00000568095 ALKQ9UM73 1620 aa7.16□□□□□ -1.26
LINC01541-202ENST00000568095 SCAF11Q99590 1463 aaKnown RBP7.16□□□□□ -1.26
LINC01541-202ENST00000568095 KDM2BQ8NHM5 1336 aa7.16□□□□□ -1.26
LINC01541-202ENST00000568095 RCAN3Q9UKA8 241 aa7.16□□□□□ -1.26
LINC01541-202ENST00000568095 RPGRIP1LQ68CZ1 1315 aa7.15□□□□□ -1.26
LINC01541-202ENST00000568095 PROM2Q8N271 834 aa7.15□□□□□ -1.26
LINC01541-202ENST00000568095 DCAF11Q8TEB1 546 aa7.15□□□□□ -1.27
LINC01541-202ENST00000568095 SLC52A1Q9NWF4 448 aa7.15□□□□□ -1.27
LINC01541-202ENST00000568095 BLMP54132 1417 aaPredicted RBP7.15□□□□□ -1.27
LINC01541-202ENST00000568095 MED14O60244 1454 aa7.15□□□□□ -1.27
LINC01541-202ENST00000568095 CEP170BQ9Y4F5 1589 aaPredicted RBP7.14□□□□□ -1.27
LINC01541-202ENST00000568095 DLC1Q96QB1 1528 aa7.14□□□□□ -1.27
LINC01541-202ENST00000568095 ADGRF5Q8IZF2 1346 aa7.14□□□□□ -1.27
LINC01541-202ENST00000568095 MYBBP1AQ9BQG0 1328 aaKnown RBP7.14□□□□□ -1.27
LINC01541-202ENST00000568095 CPS1P31327 1500 aa7.14□□□□□ -1.27
LINC01541-202ENST00000568095 IDI1Q13907 227 aa7.14□□□□□ -1.27
LINC01541-202ENST00000568095 RALBP1Q15311 655 aa7.14□□□□□ -1.27
LINC01541-202ENST00000568095 SBNO2Q9Y2G9 1366 aa7.14□□□□□ -1.27
LINC01541-202ENST00000568095 FBXO31Q5XUX0 539 aaPredicted RBP7.13□□□□□ -1.27
LINC01541-202ENST00000568095 PARD3Q8TEW0 1356 aa7.13□□□□□ -1.27
LINC01541-202ENST00000568095 XRN1Q8IZH2 1706 aaKnown RBP7.13□□□□□ -1.27
LINC01541-202ENST00000568095 NBPF1Q3BBV0 1214 aa7.13□□□□□ -1.27
LINC01541-202ENST00000568095 TESK2Q96S53 571 aa7.13□□□□□ -1.27
LINC01541-202ENST00000568095 DIP2AQ14689 1571 aa7.13□□□□□ -1.27
LINC01541-202ENST00000568095 TNRQ92752 1358 aa7.12□□□□□ -1.27
LINC01541-202ENST00000568095 USP32Q8NFA0 1604 aa7.12□□□□□ -1.27
LINC01541-202ENST00000568095 TULP4Q9NRJ4 1543 aa7.12□□□□□ -1.27
LINC01541-202ENST00000568095 C8orf34Q49A92 452 aa7.12□□□□□ -1.27
LINC01541-202ENST00000568095 ADGRB2O60241 1585 aa7.11□□□□□ -1.27
LINC01541-202ENST00000568095 TMC1Q8TDI8 760 aa7.11□□□□□ -1.27
LINC01541-202ENST00000568095 TECPR2O15040 1411 aa7.11□□□□□ -1.27
LINC01541-202ENST00000568095 RGL2O15211 777 aa7.11□□□□□ -1.27
LINC01541-202ENST00000568095 C14orf93Q9H972 538 aaKnown RBP7.11□□□□□ -1.27
LINC01541-202ENST00000568095 SETD1BQ9UPS6 1966 aaKnown RBP7.11□□□□□ -1.27
LINC01541-202ENST00000568095 DISP3Q9P2K9 1392 aa7.1□□□□□ -1.27
LINC01541-202ENST00000568095 RIMS2Q9UQ26 1411 aa7.1□□□□□ -1.27
LINC01541-202ENST00000568095 RGL3Q3MIN7 710 aa7.1□□□□□ -1.27
LINC01541-202ENST00000568095 TOPAZ1Q8N9V7 1692 aa7.1□□□□□ -1.27
LINC01541-202ENST00000568095 SPOCK2Q92563 424 aa7.1□□□□□ -1.27
LINC01541-202ENST00000568095 TRHP20396 242 aaPredicted RBP7.1□□□□□ -1.27
LINC01541-202ENST00000568095 PKNOX2Q96KN3 472 aa7.1□□□□□ -1.27
LINC01541-202ENST00000568095 ADAMTS13Q76LX8 1427 aa7.09□□□□□ -1.27
LINC01541-202ENST00000568095 CHD2O14647 1828 aaKnown RBP7.09□□□□□ -1.27
LINC01541-202ENST00000568095 FAM161AQ3B820 660 aa7.09□□□□□ -1.27
LINC01541-202ENST00000568095 FRAT2O75474 233 aaPredicted RBP7.09□□□□□ -1.27
LINC01541-202ENST00000568095 CHGAP10645 457 aaKnown RBP7.09□□□□□ -1.27
LINC01541-202ENST00000568095 CENPQQ7L2Z9 268 aaPredicted RBP7.09□□□□□ -1.27
LINC01541-202ENST00000568095 CRBNQ96SW2 442 aa7.08□□□□□ -1.28
LINC01541-202ENST00000568095 CARD11Q9BXL7 1154 aa7.08□□□□□ -1.28
LINC01541-202ENST00000568095 TMEM2Q9UHN6 1383 aa7.08□□□□□ -1.28
LINC01541-202ENST00000568095 RRAGDQ9NQL2 400 aaPredicted RBP7.08□□□□□ -1.28
LINC01541-202ENST00000568095 ANKRD26Q9UPS8 1709 aa7.08□□□□□ -1.28
LINC01541-202ENST00000568095 NLRP13Q86W25 1043 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms