RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 CDC42BPBQ9Y5S2 1711 aa25.86■■□□□ 1.73
MAP1LC3B-206ENST00000564844 EXOSC9Q06265 439 aaKnown RBP25.86■■□□□ 1.73
MAP1LC3B-206ENST00000564844 ZKSCAN2Q63HK3 967 aa25.86■■□□□ 1.73
MAP1LC3B-206ENST00000564844 ARHGEF5Q12774 1597 aa25.86■■□□□ 1.73
MAP1LC3B-206ENST00000564844 EIF2AK4Q9P2K8 1649 aaKnown RBP25.85■■□□□ 1.73
MAP1LC3B-206ENST00000564844 CLCN1P35523 988 aa25.84■■□□□ 1.73
MAP1LC3B-206ENST00000564844 TRIM44Q96DX7 344 aaPredicted RBP25.84■■□□□ 1.73
MAP1LC3B-206ENST00000564844 SPAG9O60271 1321 aaKnown RBP25.83■■□□□ 1.73
MAP1LC3B-206ENST00000564844 HSP90AB1P08238 724 aaKnown RBP25.83■■□□□ 1.73
MAP1LC3B-206ENST00000564844 MRE11P49959 708 aa25.82■■□□□ 1.72
MAP1LC3B-206ENST00000564844 NSD3Q9BZ95 1437 aa25.82■■□□□ 1.72
MAP1LC3B-206ENST00000564844 TRIM27P14373 513 aa25.82■■□□□ 1.72
MAP1LC3B-206ENST00000564844 ESPNB1AK53 854 aa25.81■■□□□ 1.72
MAP1LC3B-206ENST00000564844 TNPO1Q92973 898 aaKnown RBP25.81■■□□□ 1.72
MAP1LC3B-206ENST00000564844 RBM42Q9BTD8 480 aaKnown RBP25.81■■□□□ 1.72
MAP1LC3B-206ENST00000564844 ABCC2Q92887 1545 aa25.81■■□□□ 1.72
MAP1LC3B-206ENST00000564844 EFCAB2Q5VUJ9 269 aa25.8■■□□□ 1.72
MAP1LC3B-206ENST00000564844 SSH1Q8WYL5 1049 aa25.8■■□□□ 1.72
MAP1LC3B-206ENST00000564844 ZMYND15Q9H091 742 aa25.79■■□□□ 1.72
MAP1LC3B-206ENST00000564844 NOB1Q9ULX3 412 aaKnown RBP25.79■■□□□ 1.72
MAP1LC3B-206ENST00000564844 C1orf115Q9H7X2 142 aa25.78■■□□□ 1.72
MAP1LC3B-206ENST00000564844 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
MAP1LC3B-206ENST00000564844 TMEM57Q8N5G2 664 aa25.77■■□□□ 1.72
MAP1LC3B-206ENST00000564844 SYNMO15061 1565 aa25.77■■□□□ 1.72
MAP1LC3B-206ENST00000564844 CD2BP2O95400 341 aaKnown RBP25.77■■□□□ 1.72
MAP1LC3B-206ENST00000564844 LAMC1P11047 1609 aa25.76■■□□□ 1.71
MAP1LC3B-206ENST00000564844 GLIPR1L2Q4G1C9 344 aa25.76■■□□□ 1.71
MAP1LC3B-206ENST00000564844 PODXL2Q9NZ53 605 aa25.75■■□□□ 1.71
MAP1LC3B-206ENST00000564844 TTC37Q6PGP7 1564 aa25.75■■□□□ 1.71
MAP1LC3B-206ENST00000564844 TRAPPC8Q9Y2L5 1435 aa25.75■■□□□ 1.71
MAP1LC3B-206ENST00000564844 WDR63Q8IWG1 891 aa25.74■■□□□ 1.71
MAP1LC3B-206ENST00000564844 ERVK-7P63135 1459 aa25.74■■□□□ 1.71
MAP1LC3B-206ENST00000564844 NINLQ9Y2I6 1382 aa25.74■■□□□ 1.71
MAP1LC3B-206ENST00000564844 CFAP53Q96M91 514 aa25.74■■□□□ 1.71
MAP1LC3B-206ENST00000564844 VIRMAQ69YN4 1812 aaKnown RBP25.74■■□□□ 1.71
MAP1LC3B-206ENST00000564844 NPC1L1Q9UHC9 1359 aa25.73■■□□□ 1.71
MAP1LC3B-206ENST00000564844 ZNF692Q9BU19 519 aaPredicted RBP25.73■■□□□ 1.71
MAP1LC3B-206ENST00000564844 GGT6Q6P531 493 aa25.73■■□□□ 1.71
MAP1LC3B-206ENST00000564844 POLR3AO14802 1390 aaPredicted RBP25.73■■□□□ 1.71
MAP1LC3B-206ENST00000564844 UNC13BO14795 1591 aa25.72■■□□□ 1.71
MAP1LC3B-206ENST00000564844 NCLP19338 710 aaKnown RBP25.72■■□□□ 1.71
MAP1LC3B-206ENST00000564844 ARID3AQ99856 593 aa25.72■■□□□ 1.71
MAP1LC3B-206ENST00000564844 MADDQ8WXG6 1647 aa25.72■■□□□ 1.71
MAP1LC3B-206ENST00000564844 DDX11L8A8MPP1 907 aa25.72■■□□□ 1.71
MAP1LC3B-206ENST00000564844 STK26Q9P289 416 aa25.72■■□□□ 1.71
MAP1LC3B-206ENST00000564844 ELL2O00472 640 aaPredicted RBP25.71■■□□□ 1.71
MAP1LC3B-206ENST00000564844 NGEFQ8N5V2 710 aa25.71■■□□□ 1.71
MAP1LC3B-206ENST00000564844 ANKRD45Q5TZF3 282 aa25.7■■□□□ 1.71
MAP1LC3B-206ENST00000564844 UGGT1Q9NYU2 1555 aa25.7■■□□□ 1.7
MAP1LC3B-206ENST00000564844 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
MAP1LC3B-206ENST00000564844 MYOM1P52179 1685 aa25.69■■□□□ 1.7
MAP1LC3B-206ENST00000564844 PREX2Q70Z35 1606 aa25.69■■□□□ 1.7
MAP1LC3B-206ENST00000564844 ATP10AO60312 1499 aa25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 GGNBP2Q9H3C7 697 aa25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 RNF17Q9BXT8 1623 aaKnown RBP25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 ZBTB7CA1YPR0 619 aa25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 SSFA2P28290 1259 aa25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 ATF7IPQ6VMQ6 1270 aa25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 CABP2Q9NPB3 220 aa25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 MAST1Q9Y2H9 1570 aa25.68■■□□□ 1.7
MAP1LC3B-206ENST00000564844 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.67■■□□□ 1.72e-6■■■■□ 19.9
MAP1LC3B-206ENST00000564844 RTEL1-TNFRSF6BF6WH68 1400 aa25.67■■□□□ 1.7
MAP1LC3B-206ENST00000564844 IQGAP1P46940 1657 aa25.67■■□□□ 1.7
MAP1LC3B-206ENST00000564844 ERCC6L2Q5T890 1561 aa25.66■■□□□ 1.7
MAP1LC3B-206ENST00000564844 DDX19BQ9UMR2 479 aa25.66■■□□□ 1.7
MAP1LC3B-206ENST00000564844 DUOX2Q9NRD8 1548 aa25.66■■□□□ 1.7
MAP1LC3B-206ENST00000564844 FBLN1P23142 703 aa25.66■■□□□ 1.7
MAP1LC3B-206ENST00000564844 RBM10P98175 930 aaKnown RBP25.65■■□□□ 1.7
MAP1LC3B-206ENST00000564844 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
MAP1LC3B-206ENST00000564844 GBP4Q96PP9 640 aa25.63■■□□□ 1.69
MAP1LC3B-206ENST00000564844 KDM5AP29375 1690 aaKnown RBP25.62■■□□□ 1.69
MAP1LC3B-206ENST00000564844 RIPK4P57078 832 aa25.62■■□□□ 1.69
MAP1LC3B-206ENST00000564844 DDX49Q9Y6V7 483 aaKnown RBP25.61■■□□□ 1.69
MAP1LC3B-206ENST00000564844 TMPOP42166 694 aaKnown RBP25.61■■□□□ 1.69
MAP1LC3B-206ENST00000564844 GAS2L2Q8NHY3 880 aa25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 THUMPD2Q9BTF0 503 aaKnown RBP25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 SCAPERQ9BY12 1400 aa25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 AAMPQ13685 434 aa25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 CHD1LQ86WJ1 897 aa25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 SMC5Q8IY18 1101 aa25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 HDAC1Q13547 482 aaPredicted RBP25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 CHAMP1Q96JM3 812 aa25.6■■□□□ 1.69
MAP1LC3B-206ENST00000564844 RRP9O43818 475 aaKnown RBP25.59■■□□□ 1.69
MAP1LC3B-206ENST00000564844 KIAA1211Q6ZU35 1233 aa25.59■■□□□ 1.69
MAP1LC3B-206ENST00000564844 CHD1O14646 1710 aa25.59■■□□□ 1.69
MAP1LC3B-206ENST00000564844 TRIM35Q9UPQ4 493 aa25.59■■□□□ 1.69
MAP1LC3B-206ENST00000564844 CLTCL1P53675 1640 aa25.58■■□□□ 1.69
MAP1LC3B-206ENST00000564844 FOXD4L5Q5VV16 416 aaPredicted RBP25.58■■□□□ 1.69
MAP1LC3B-206ENST00000564844 FOXD4L4Q8WXT5 416 aaPredicted RBP25.58■■□□□ 1.69
MAP1LC3B-206ENST00000564844 ZBTB40Q9NUA8 1239 aa25.58■■□□□ 1.69
MAP1LC3B-206ENST00000564844 APBB1O00213 710 aa25.58■■□□□ 1.69
MAP1LC3B-206ENST00000564844 PTPRTO14522 1441 aa25.58■■□□□ 1.68
MAP1LC3B-206ENST00000564844 NASPP49321 788 aaPredicted RBP25.57■■□□□ 1.68
MAP1LC3B-206ENST00000564844 KIF2CQ99661 725 aa25.56■■□□□ 1.68
MAP1LC3B-206ENST00000564844 RAB3GAP1Q15042 981 aa25.56■■□□□ 1.68
MAP1LC3B-206ENST00000564844 CEP152O94986 1710 aa25.56■■□□□ 1.68
MAP1LC3B-206ENST00000564844 NUCB1Q02818 461 aa25.55■■□□□ 1.68
MAP1LC3B-206ENST00000564844 MCTP1Q6DN14 999 aa25.55■■□□□ 1.68
MAP1LC3B-206ENST00000564844 TBC1D9Q6ZT07 1266 aa25.54■■□□□ 1.68
MAP1LC3B-206ENST00000564844 RBM25P49756 843 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms