RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 CDCA8Q53HL2 280 aa19.73■□□□□ 0.75
RABGGTA-209ENST00000559551 ANP32CO43423 234 aa19.72■□□□□ 0.75
RABGGTA-209ENST00000559551 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
RABGGTA-209ENST00000559551 PANK3Q9H999 370 aa19.72■□□□□ 0.75
RABGGTA-209ENST00000559551 NPHP4O75161 1426 aaPredicted RBP19.72■□□□□ 0.75
RABGGTA-209ENST00000559551 NCKAP5LQ9HCH0 1330 aa19.72■□□□□ 0.75
RABGGTA-209ENST00000559551 SIRT1Q96EB6 747 aa19.72■□□□□ 0.75
RABGGTA-209ENST00000559551 LMTK3Q96Q04 1460 aa19.72■□□□□ 0.75
RABGGTA-209ENST00000559551 EVC2Q86UK5 1308 aa19.7■□□□□ 0.74
RABGGTA-209ENST00000559551 PRKRIP1Q9H875 184 aaPredicted RBP19.7■□□□□ 0.74
RABGGTA-209ENST00000559551 AMOTL2Q9Y2J4 779 aa19.7■□□□□ 0.74
RABGGTA-209ENST00000559551 CABP2Q9NPB3 220 aa19.69■□□□□ 0.74
RABGGTA-209ENST00000559551 HSPA2P54652 639 aa19.68■□□□□ 0.74
RABGGTA-209ENST00000559551 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
RABGGTA-209ENST00000559551 PIK3R4Q99570 1358 aa19.67■□□□□ 0.74
RABGGTA-209ENST00000559551 ADGRB2O60241 1585 aa19.67■□□□□ 0.74
RABGGTA-209ENST00000559551 STRCQ7RTU9 1775 aa19.67■□□□□ 0.74
RABGGTA-209ENST00000559551 PUS7Q96PZ0 661 aaKnown RBP19.67■□□□□ 0.74
RABGGTA-209ENST00000559551 SLC12A5Q9H2X9 1139 aa19.66■□□□□ 0.74
RABGGTA-209ENST00000559551 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
RABGGTA-209ENST00000559551 KCNA6P17658 529 aa19.64■□□□□ 0.74
RABGGTA-209ENST00000559551 CARD14Q9BXL6 1004 aa19.64■□□□□ 0.73
RABGGTA-209ENST00000559551 CNGB1Q14028 1251 aaPredicted RBP19.63■□□□□ 0.73
RABGGTA-209ENST00000559551 STRCP1A6NGW2 1772 aa19.62■□□□□ 0.73
RABGGTA-209ENST00000559551 CCER2I3L3R5 266 aa19.62■□□□□ 0.73
RABGGTA-209ENST00000559551 SRPK2P78362 688 aaKnown RBP19.62■□□□□ 0.73
RABGGTA-209ENST00000559551 CCDC184Q52MB2 194 aa19.62■□□□□ 0.73
RABGGTA-209ENST00000559551 NWD1Q149M9 1564 aa19.62■□□□□ 0.73
RABGGTA-209ENST00000559551 CD163L1Q9NR16 1453 aa19.62■□□□□ 0.73
RABGGTA-209ENST00000559551 WASLO00401 505 aaPredicted RBP19.61■□□□□ 0.73
RABGGTA-209ENST00000559551 NALCNQ8IZF0 1738 aa19.61■□□□□ 0.73
RABGGTA-209ENST00000559551 RGPD8O14715 1765 aaPredicted RBP19.6■□□□□ 0.73
RABGGTA-209ENST00000559551 AMER1Q5JTC6 1135 aaPredicted RBP19.6■□□□□ 0.73
RABGGTA-209ENST00000559551 TMC1Q8TDI8 760 aa19.6■□□□□ 0.73
RABGGTA-209ENST00000559551 USP32Q8NFA0 1604 aa19.59■□□□□ 0.73
RABGGTA-209ENST00000559551 TOPAZ1Q8N9V7 1692 aa19.58■□□□□ 0.73
RABGGTA-209ENST00000559551 ATAD2Q6PL18 1390 aa19.58■□□□□ 0.73
RABGGTA-209ENST00000559551 PARD3Q8TEW0 1356 aa19.58■□□□□ 0.73
RABGGTA-209ENST00000559551 ATP7BP35670 1465 aa19.58■□□□□ 0.72
RABGGTA-209ENST00000559551 PRR36Q9H6K5 1346 aa19.58■□□□□ 0.72
RABGGTA-209ENST00000559551 ANKRD36BQ8N2N9 1353 aa19.56■□□□□ 0.72
RABGGTA-209ENST00000559551 CENPBP07199 599 aaPredicted RBP19.56■□□□□ 0.72
RABGGTA-209ENST00000559551 CC2D1BQ5T0F9 858 aaKnown RBP19.56■□□□□ 0.72
RABGGTA-209ENST00000559551 A0A1W2PP64 1363 aa19.55■□□□□ 0.72
RABGGTA-209ENST00000559551 MYT1Q01538 1121 aa19.55■□□□□ 0.72
RABGGTA-209ENST00000559551 NSD3Q9BZ95 1437 aa19.55■□□□□ 0.72
RABGGTA-209ENST00000559551 KTN1Q86UP2 1357 aaKnown RBP19.54■□□□□ 0.72
RABGGTA-209ENST00000559551 NINLQ9Y2I6 1382 aa19.54■□□□□ 0.72
RABGGTA-209ENST00000559551 KNSTRNQ9Y448 316 aa19.54■□□□□ 0.72
RABGGTA-209ENST00000559551 FMN2Q9NZ56 1722 aa19.54■□□□□ 0.72
RABGGTA-209ENST00000559551 AKAP12Q02952 1782 aa19.54■□□□□ 0.72
RABGGTA-209ENST00000559551 RBM33Q96EV2 1170 aaKnown RBP19.53■□□□□ 0.72
RABGGTA-209ENST00000559551 CABP1Q9NZU7 370 aa19.53■□□□□ 0.72
RABGGTA-209ENST00000559551 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
RABGGTA-209ENST00000559551 NUDT16Q96DE0 195 aaKnown RBP19.52■□□□□ 0.72
RABGGTA-209ENST00000559551 PPIP5K1Q6PFW1 1433 aa19.51■□□□□ 0.71
RABGGTA-209ENST00000559551 RALBP1Q15311 655 aa19.51■□□□□ 0.71
RABGGTA-209ENST00000559551 MON2Q7Z3U7 1717 aa19.51■□□□□ 0.71
RABGGTA-209ENST00000559551 CDC42BPGQ6DT37 1551 aa19.5■□□□□ 0.71
RABGGTA-209ENST00000559551 ITSN1Q15811 1721 aa19.5■□□□□ 0.71
RABGGTA-209ENST00000559551 YTHDC1Q96MU7 727 aaKnown RBP19.5■□□□□ 0.71
RABGGTA-209ENST00000559551 NKTRP30414 1462 aaKnown RBP19.49■□□□□ 0.71
RABGGTA-209ENST00000559551 NUTM2FA1L443 756 aa19.48■□□□□ 0.71
RABGGTA-209ENST00000559551 CPSF1Q10570 1443 aaKnown RBP19.48■□□□□ 0.71
RABGGTA-209ENST00000559551 MYBBP1AQ9BQG0 1328 aaKnown RBP19.48■□□□□ 0.71
RABGGTA-209ENST00000559551 XIRP1Q702N8 1843 aaKnown RBP19.48■□□□□ 0.71
RABGGTA-209ENST00000559551 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
RABGGTA-209ENST00000559551 KIF20BQ96Q89 1820 aa19.47■□□□□ 0.71
RABGGTA-209ENST00000559551 ANKRD26Q9UPS8 1709 aa19.47■□□□□ 0.71
RABGGTA-209ENST00000559551 ADGRL3Q9HAR2 1447 aa19.47■□□□□ 0.71
RABGGTA-209ENST00000559551 MRS2Q9HD23 443 aa19.45■□□□□ 0.7
RABGGTA-209ENST00000559551 NRKQ7Z2Y5 1582 aa19.44■□□□□ 0.7
RABGGTA-209ENST00000559551 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
RABGGTA-209ENST00000559551 BRD4O60885 1362 aaPredicted RBP19.42■□□□□ 0.7
RABGGTA-209ENST00000559551 PPP2R1AP30153 589 aa19.42■□□□□ 0.7
RABGGTA-209ENST00000559551 ANKARQ7Z5J8 1434 aa19.41■□□□□ 0.7
RABGGTA-209ENST00000559551 PLEKHG3A1L390 1219 aa19.41■□□□□ 0.7
RABGGTA-209ENST00000559551 HDGFL2Q7Z4V5 671 aaPredicted RBP19.41■□□□□ 0.7
RABGGTA-209ENST00000559551 CGNL1Q0VF96 1302 aa19.41■□□□□ 0.7
RABGGTA-209ENST00000559551 NLRP13Q86W25 1043 aa19.4■□□□□ 0.7
RABGGTA-209ENST00000559551 PROSER2Q86WR7 435 aaPredicted RBP19.4■□□□□ 0.7
RABGGTA-209ENST00000559551 FYB1O15117 783 aa19.39■□□□□ 0.69
RABGGTA-209ENST00000559551 ACEP12821 1306 aa19.39■□□□□ 0.69
RABGGTA-209ENST00000559551 ILDR1Q86SU0 546 aaPredicted RBP19.39■□□□□ 0.69
RABGGTA-209ENST00000559551 EDC4Q6P2E9 1401 aaKnown RBP19.38■□□□□ 0.69
RABGGTA-209ENST00000559551 TMEM94Q12767 1356 aa19.38■□□□□ 0.69
RABGGTA-209ENST00000559551 GTF3C3Q9Y5Q9 886 aa19.37■□□□□ 0.69
RABGGTA-209ENST00000559551 NSD2O96028 1365 aa19.37■□□□□ 0.69
RABGGTA-209ENST00000559551 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
RABGGTA-209ENST00000559551 GGNBP2Q9H3C7 697 aa19.37■□□□□ 0.69
RABGGTA-209ENST00000559551 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-209ENST00000559551 SSH2Q76I76 1423 aa19.36■□□□□ 0.69
RABGGTA-209ENST00000559551 PMFBP1Q8TBY8 1022 aa19.36■□□□□ 0.69
RABGGTA-209ENST00000559551 POLR3AO14802 1390 aaPredicted RBP19.36■□□□□ 0.69
RABGGTA-209ENST00000559551 USP6P35125 1406 aa19.35■□□□□ 0.69
RABGGTA-209ENST00000559551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.35■□□□□ 0.69
RABGGTA-209ENST00000559551 FAM9BQ8IZU0 186 aa19.35■□□□□ 0.69
RABGGTA-209ENST00000559551 MORC1Q86VD1 984 aa19.34■□□□□ 0.69
RABGGTA-209ENST00000559551 LRRC7Q96NW7 1537 aa19.34■□□□□ 0.69
RABGGTA-209ENST00000559551 ZRANB1Q9UGI0 708 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms