RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
PSMA4-208ENST00000558639 ARHGAP35Q9NRY4 1499 aa12.06□□□□□ -0.48
PSMA4-208ENST00000558639 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
PSMA4-208ENST00000558639 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
PSMA4-208ENST00000558639 YEATS2Q9ULM3 1422 aa12.05□□□□□ -0.48
PSMA4-208ENST00000558639 PTPREP23469 700 aa12.05□□□□□ -0.48
PSMA4-208ENST00000558639 PRSS12P56730 875 aa12.05□□□□□ -0.48
PSMA4-208ENST00000558639 LHX8Q68G74 356 aa12.05□□□□□ -0.48
PSMA4-208ENST00000558639 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
PSMA4-208ENST00000558639 GIGYF2Q6Y7W6 1299 aaKnown RBP12.04□□□□□ -0.48
PSMA4-208ENST00000558639 CFAP74Q9C0B2 1584 aa12.04□□□□□ -0.48
PSMA4-208ENST00000558639 MADDQ8WXG6 1647 aa12.04□□□□□ -0.48
PSMA4-208ENST00000558639 RICTORQ6R327 1708 aa12.03□□□□□ -0.48
PSMA4-208ENST00000558639 CEBPAP49715 358 aaPredicted RBP12.03□□□□□ -0.48
PSMA4-208ENST00000558639 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
PSMA4-208ENST00000558639 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
PSMA4-208ENST00000558639 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
PSMA4-208ENST00000558639 ZNF777Q9ULD5 760 aaPredicted RBP12.03□□□□□ -0.48
PSMA4-208ENST00000558639 ZFYVE16Q7Z3T8 1539 aa12.02□□□□□ -0.48
PSMA4-208ENST00000558639 HECW1Q76N89 1606 aa12.02□□□□□ -0.49
PSMA4-208ENST00000558639 MDM2Q00987 491 aaPredicted RBP12.02□□□□□ -0.49
PSMA4-208ENST00000558639 FAM161AQ3B820 660 aa12.02□□□□□ -0.49
PSMA4-208ENST00000558639 METTL3Q86U44 580 aaKnown RBP12.02□□□□□ -0.49
PSMA4-208ENST00000558639 FBXO41Q8TF61 875 aa12.02□□□□□ -0.49
PSMA4-208ENST00000558639 ADGRG1Q9Y653 693 aa12.02□□□□□ -0.49
PSMA4-208ENST00000558639 RIMS1Q86UR5 1692 aaKnown RBP12.02□□□□□ -0.49
PSMA4-208ENST00000558639 CLIP1P30622 1438 aa12.02□□□□□ -0.49
PSMA4-208ENST00000558639 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
PSMA4-208ENST00000558639 TIMELESSQ9UNS1 1208 aa12.01□□□□□ -0.49
PSMA4-208ENST00000558639 MAGI2Q86UL8 1455 aa12.01□□□□□ -0.49
PSMA4-208ENST00000558639 TTC13Q8NBP0 860 aa12□□□□□ -0.49
PSMA4-208ENST00000558639 RBM46Q8TBY0 533 aaKnown RBP12□□□□□ -0.49
PSMA4-208ENST00000558639 PHOX2BQ99453 314 aa12□□□□□ -0.49
PSMA4-208ENST00000558639 TROQ12816 1431 aaPredicted RBP12□□□□□ -0.49
PSMA4-208ENST00000558639 ATP10AO60312 1499 aa12□□□□□ -0.49
PSMA4-208ENST00000558639 ARHGAP5Q13017 1502 aa12□□□□□ -0.49
PSMA4-208ENST00000558639 ARHGEF40Q8TER5 1519 aa12□□□□□ -0.49
PSMA4-208ENST00000558639 PPP1R3GB7ZBB8 358 aa11.99□□□□□ -0.49
PSMA4-208ENST00000558639 PXYLP1Q8TE99 480 aa11.99□□□□□ -0.49
PSMA4-208ENST00000558639 COL9A1P20849 921 aa11.98□□□□□ -0.49
PSMA4-208ENST00000558639 C14orf37Q86TY3 774 aa11.98□□□□□ -0.49
PSMA4-208ENST00000558639 MYO5CQ9NQX4 1742 aa11.97□□□□□ -0.49
PSMA4-208ENST00000558639 KIF14Q15058 1648 aa11.97□□□□□ -0.49
PSMA4-208ENST00000558639 REPIN1Q9BWE0 567 aaKnown RBP11.97□□□□□ -0.49
PSMA4-208ENST00000558639 PCF11O94913 1555 aaKnown RBP11.96□□□□□ -0.49
PSMA4-208ENST00000558639 ZMYM4Q5VZL5 1548 aa11.96□□□□□ -0.49
PSMA4-208ENST00000558639 LMTK3Q96Q04 1460 aa11.96□□□□□ -0.49
PSMA4-208ENST00000558639 PLEKHG3A1L390 1219 aa11.96□□□□□ -0.49
PSMA4-208ENST00000558639 MS4A1P11836 297 aa11.96□□□□□ -0.49
PSMA4-208ENST00000558639 TMUB1Q9BVT8 246 aa11.96□□□□□ -0.49
PSMA4-208ENST00000558639 C9orf84Q5VXU9 1444 aa11.95□□□□□ -0.5
PSMA4-208ENST00000558639 SSTR3P32745 418 aaPredicted RBP11.95□□□□□ -0.5
PSMA4-208ENST00000558639 HNRNPMP52272 730 aaKnown RBP eCLIP11.95□□□□□ -0.5
PSMA4-208ENST00000558639 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
PSMA4-208ENST00000558639 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
PSMA4-208ENST00000558639 SIGLEC1Q9BZZ2 1709 aa11.94□□□□□ -0.5
PSMA4-208ENST00000558639 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
PSMA4-208ENST00000558639 KCNK17Q96T54 332 aa11.93□□□□□ -0.5
PSMA4-208ENST00000558639 ERBB3P21860 1342 aa11.92□□□□□ -0.5
PSMA4-208ENST00000558639 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
PSMA4-208ENST00000558639 NBPF26B4DH59 902 aa11.92□□□□□ -0.5
PSMA4-208ENST00000558639 FER1L4A9Z1Z3 1794 aa11.92□□□□□ -0.5
PSMA4-208ENST00000558639 CCDC18Q5T9S5 1454 aa11.91□□□□□ -0.5
PSMA4-208ENST00000558639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
PSMA4-208ENST00000558639 TRIM6-TRIM34B2RNG4 842 aa11.91□□□□□ -0.5
PSMA4-208ENST00000558639 NLRP7Q8WX94 980 aa11.91□□□□□ -0.5
PSMA4-208ENST00000558639 GOPCQ9HD26 462 aa11.91□□□□□ -0.5
PSMA4-208ENST00000558639 FAM217BQ9NTX9 383 aaPredicted RBP11.91□□□□□ -0.5
PSMA4-208ENST00000558639 CFDP1Q9UEE9 299 aaPredicted RBP11.91□□□□□ -0.5
PSMA4-208ENST00000558639 TSKSQ9UJT2 592 aa11.91□□□□□ -0.5
PSMA4-208ENST00000558639 TRAPPC8Q9Y2L5 1435 aa11.91□□□□□ -0.5
PSMA4-208ENST00000558639 FAM198AQ9UFP1 575 aa11.9□□□□□ -0.5
PSMA4-208ENST00000558639 CDC42BPBQ9Y5S2 1711 aa11.9□□□□□ -0.5
PSMA4-208ENST00000558639 NUDT18Q6ZVK8 323 aa11.89□□□□□ -0.51
PSMA4-208ENST00000558639 BEGAINQ9BUH8 593 aa11.89□□□□□ -0.51
PSMA4-208ENST00000558639 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
PSMA4-208ENST00000558639 PNMA3Q9UL41 463 aa11.89□□□□□ -0.51
PSMA4-208ENST00000558639 SPAG9O60271 1321 aaKnown RBP11.88□□□□□ -0.51
PSMA4-208ENST00000558639 ARHGEF12Q9NZN5 1544 aa11.88□□□□□ -0.51
PSMA4-208ENST00000558639 RCCD1A6NED2 376 aa11.88□□□□□ -0.51
PSMA4-208ENST00000558639 TATDN2Q93075 761 aa11.88□□□□□ -0.51
PSMA4-208ENST00000558639 PCMTD1Q96MG8 357 aaPredicted RBP11.88□□□□□ -0.51
PSMA4-208ENST00000558639 EYA1Q99502 592 aa11.88□□□□□ -0.51
PSMA4-208ENST00000558639 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
PSMA4-208ENST00000558639 GGT6Q6P531 493 aa11.87□□□□□ -0.51
PSMA4-208ENST00000558639 MLH3Q9UHC1 1453 aa11.87□□□□□ -0.51
PSMA4-208ENST00000558639 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
PSMA4-208ENST00000558639 MTUS2Q5JR59 1369 aa11.86□□□□□ -0.51
PSMA4-208ENST00000558639 CCNB3Q8WWL7 1395 aa11.86□□□□□ -0.51
PSMA4-208ENST00000558639 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
PSMA4-208ENST00000558639 DNAJB2P25686 324 aa11.85□□□□□ -0.51
PSMA4-208ENST00000558639 KDM5CP41229 1560 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 DIP2CQ9Y2E4 1556 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 FYCO1Q9BQS8 1478 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 ST18O60284 1047 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 EMP3P54852 163 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 PROX2Q3B8N5 592 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
PSMA4-208ENST00000558639 PREX2Q70Z35 1606 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms