RNA–Protein interactions for RNA: ENST00000556830.1

LRP1-212, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 1,847 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-212ENST00000556830 TBC1D32Q96NH3 1257 aa16.3■□□□□ 0.2
LRP1-212ENST00000556830 PANK3Q9H999 370 aa16.3■□□□□ 0.2
LRP1-212ENST00000556830 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
LRP1-212ENST00000556830 GLI2P10070 1586 aa16.29■□□□□ 0.2
LRP1-212ENST00000556830 NEO1Q92859 1461 aa16.29■□□□□ 0.2
LRP1-212ENST00000556830 NPC1L1Q9UHC9 1359 aa16.29■□□□□ 0.2
LRP1-212ENST00000556830 TESK2Q96S53 571 aa16.29■□□□□ 0.2
LRP1-212ENST00000556830 KDM2AQ9Y2K7 1162 aa16.29■□□□□ 0.2
LRP1-212ENST00000556830 E9PSI1 815 aa16.28■□□□□ 0.2
LRP1-212ENST00000556830 FAM69CQ0P6D2 419 aa16.28■□□□□ 0.2
LRP1-212ENST00000556830 DISP3Q9P2K9 1392 aa16.27■□□□□ 0.2
LRP1-212ENST00000556830 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
LRP1-212ENST00000556830 CHMP5Q9NZZ3 219 aa16.27■□□□□ 0.2
LRP1-212ENST00000556830 MLH3Q9UHC1 1453 aa16.27■□□□□ 0.19
LRP1-212ENST00000556830 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
LRP1-212ENST00000556830 KIF3BO15066 747 aa16.26■□□□□ 0.19
LRP1-212ENST00000556830 PTMSP20962 102 aa16.26■□□□□ 0.19
LRP1-212ENST00000556830 SLKQ9H2G2 1235 aaPredicted RBP16.26■□□□□ 0.19
LRP1-212ENST00000556830 EFCAB6Q5THR3 1501 aa16.26■□□□□ 0.19
LRP1-212ENST00000556830 DIP2CQ9Y2E4 1556 aa16.26■□□□□ 0.19
LRP1-212ENST00000556830 KIF13AQ9H1H9 1805 aa16.26■□□□□ 0.19
LRP1-212ENST00000556830 CLUAP1Q96AJ1 413 aa16.26■□□□□ 0.19
LRP1-212ENST00000556830 CFAP65Q6ZU64 1925 aaKnown RBP16.26■□□□□ 0.19
LRP1-212ENST00000556830 PPP2R1AP30153 589 aa16.25■□□□□ 0.19
LRP1-212ENST00000556830 MYH16Q9H6N6 1097 aa16.25■□□□□ 0.19
LRP1-212ENST00000556830 ESPNB1AK53 854 aa16.24■□□□□ 0.19
LRP1-212ENST00000556830 TBC1D2Q9BYX2 928 aa16.24■□□□□ 0.19
LRP1-212ENST00000556830 SYNMO15061 1565 aa16.24■□□□□ 0.19
LRP1-212ENST00000556830 RGL3Q3MIN7 710 aa16.24■□□□□ 0.19
LRP1-212ENST00000556830 PDCL3Q9H2J4 239 aa16.24■□□□□ 0.19
LRP1-212ENST00000556830 KANK1Q14678 1352 aa16.23■□□□□ 0.19
LRP1-212ENST00000556830 UGGT1Q9NYU2 1555 aa16.23■□□□□ 0.19
LRP1-212ENST00000556830 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
LRP1-212ENST00000556830 IGHDP01880 384 aa16.23■□□□□ 0.19
LRP1-212ENST00000556830 CDCA8Q53HL2 280 aa16.23■□□□□ 0.19
LRP1-212ENST00000556830 TRAK2O60296 914 aa16.22■□□□□ 0.19
LRP1-212ENST00000556830 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
LRP1-212ENST00000556830 PTPRTO14522 1441 aa16.22■□□□□ 0.19
LRP1-212ENST00000556830 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
LRP1-212ENST00000556830 KIF1BO60333 1816 aa16.22■□□□□ 0.19
LRP1-212ENST00000556830 TERF1P54274 439 aa16.22■□□□□ 0.19
LRP1-212ENST00000556830 GRPEL1Q9HAV7 217 aa16.22■□□□□ 0.19
LRP1-212ENST00000556830 ASXL1Q8IXJ9 1541 aa16.21■□□□□ 0.19
LRP1-212ENST00000556830 RAPGEF3O95398 923 aa16.21■□□□□ 0.19
LRP1-212ENST00000556830 SEC24BO95487 1268 aa16.21■□□□□ 0.19
LRP1-212ENST00000556830 LMTK2Q8IWU2 1503 aa16.2■□□□□ 0.18
LRP1-212ENST00000556830 SKOR2Q2VWA4 1001 aaPredicted RBP16.19■□□□□ 0.18
LRP1-212ENST00000556830 CAMSAP1Q5T5Y3 1602 aa16.19■□□□□ 0.18
LRP1-212ENST00000556830 IFT172Q9UG01 1749 aa16.18■□□□□ 0.18
LRP1-212ENST00000556830 AMER1Q5JTC6 1135 aaPredicted RBP16.18■□□□□ 0.18
LRP1-212ENST00000556830 TRIM44Q96DX7 344 aaPredicted RBP16.18■□□□□ 0.18
LRP1-212ENST00000556830 PANK2Q9BZ23 570 aa16.17■□□□□ 0.18
LRP1-212ENST00000556830 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
LRP1-212ENST00000556830 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
LRP1-212ENST00000556830 MAP7D2Q96T17 732 aa16.17■□□□□ 0.18
LRP1-212ENST00000556830 CIZ1Q9ULV3 898 aaPredicted RBP16.17■□□□□ 0.18
LRP1-212ENST00000556830 YEATS2Q9ULM3 1422 aa16.16■□□□□ 0.18
LRP1-212ENST00000556830 ABCC3O15438 1527 aa16.16■□□□□ 0.18
LRP1-212ENST00000556830 CALD1Q05682 793 aaKnown RBP16.15■□□□□ 0.18
LRP1-212ENST00000556830 NCOA3Q9Y6Q9 1424 aa16.15■□□□□ 0.18
LRP1-212ENST00000556830 SLC24A1O60721 1099 aa16.15■□□□□ 0.18
LRP1-212ENST00000556830 BCAR3O75815 825 aa16.15■□□□□ 0.18
LRP1-212ENST00000556830 RWDD1Q9H446 243 aaPredicted RBP16.15■□□□□ 0.18
LRP1-212ENST00000556830 IQGAP1P46940 1657 aa16.14■□□□□ 0.17
LRP1-212ENST00000556830 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
LRP1-212ENST00000556830 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
LRP1-212ENST00000556830 ZC3H13Q5T200 1668 aaKnown RBP16.12■□□□□ 0.17
LRP1-212ENST00000556830 NEURL4Q96JN8 1562 aa16.12■□□□□ 0.17
LRP1-212ENST00000556830 NPATQ14207 1427 aa16.11■□□□□ 0.17
LRP1-212ENST00000556830 CCDC173Q0VFZ6 552 aa16.11■□□□□ 0.17
LRP1-212ENST00000556830 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
LRP1-212ENST00000556830 GGT6Q6P531 493 aa16.11■□□□□ 0.17
LRP1-212ENST00000556830 HSCBQ8IWL3 235 aa16.11■□□□□ 0.17
LRP1-212ENST00000556830 GBP4Q96PP9 640 aa16.11■□□□□ 0.17
LRP1-212ENST00000556830 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
LRP1-212ENST00000556830 SNX21Q969T3 373 aa16.1■□□□□ 0.17
LRP1-212ENST00000556830 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
LRP1-212ENST00000556830 IBTKQ9P2D0 1353 aaPredicted RBP16.1■□□□□ 0.17
LRP1-212ENST00000556830 ADGRB3O60242 1522 aa16.1■□□□□ 0.17
LRP1-212ENST00000556830 DDIT3P35638 169 aa16.1■□□□□ 0.17
LRP1-212ENST00000556830 GZF1Q9H116 711 aaPredicted RBP16.1■□□□□ 0.17
LRP1-212ENST00000556830 APAF1O14727 1248 aa16.09■□□□□ 0.17
LRP1-212ENST00000556830 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
LRP1-212ENST00000556830 PPP1R9BQ96SB3 815 aa16.09■□□□□ 0.17
LRP1-212ENST00000556830 PDZRN3Q9UPQ7 1066 aa16.09■□□□□ 0.17
LRP1-212ENST00000556830 PPLO60437 1756 aa16.09■□□□□ 0.17
LRP1-212ENST00000556830 KIAA1210Q9ULL0 1709 aa16.09■□□□□ 0.17
LRP1-212ENST00000556830 ADRA2BP18089 450 aa16.08■□□□□ 0.17
LRP1-212ENST00000556830 HS1BP3Q53T59 392 aa16.08■□□□□ 0.17
LRP1-212ENST00000556830 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.17
LRP1-212ENST00000556830 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.17
LRP1-212ENST00000556830 COG6Q9Y2V7 657 aa16.08■□□□□ 0.17
LRP1-212ENST00000556830 MTERF4Q7Z6M4 381 aaKnown RBP16.08■□□□□ 0.16
LRP1-212ENST00000556830 ERBB4Q15303 1308 aa16.07■□□□□ 0.16
LRP1-212ENST00000556830 OFD1O75665 1012 aa16.07■□□□□ 0.16
LRP1-212ENST00000556830 MYO5BQ9ULV0 1848 aa16.06■□□□□ 0.16
LRP1-212ENST00000556830 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
LRP1-212ENST00000556830 SMC5Q8IY18 1101 aa16.06■□□□□ 0.16
LRP1-212ENST00000556830 ANP32BQ92688 251 aaKnown RBP16.06■□□□□ 0.16
LRP1-212ENST00000556830 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms