RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 NSD2O96028 1365 aa10.31□□□□□ -0.76
LINC00641-201ENST00000555379 FAM135AQ9P2D6 1515 aa10.3□□□□□ -0.76
LINC00641-201ENST00000555379 GNAI3P08754 354 aa10.3□□□□□ -0.76
LINC00641-201ENST00000555379 KIF21AQ7Z4S6 1674 aa10.3□□□□□ -0.76
LINC00641-201ENST00000555379 ERBINQ96RT1 1412 aa10.3□□□□□ -0.76
LINC00641-201ENST00000555379 NLRP6P59044 892 aa10.3□□□□□ -0.76
LINC00641-201ENST00000555379 G3BP1Q13283 466 aaKnown RBP eCLIP10.3□□□□□ -0.76
LINC00641-201ENST00000555379 TPM2P07951 284 aa10.3□□□□□ -0.76
LINC00641-201ENST00000555379 CCDC30Q5VVM6 783 aa10.3□□□□□ -0.76
LINC00641-201ENST00000555379 AFAP1Q8N556 730 aa10.29□□□□□ -0.76
LINC00641-201ENST00000555379 ZKSCAN1P17029 563 aaPredicted RBP10.29□□□□□ -0.76
LINC00641-201ENST00000555379 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
LINC00641-201ENST00000555379 HOOK1Q9UJC3 728 aaKnown RBP10.29□□□□□ -0.76
LINC00641-201ENST00000555379 FANCAO15360 1455 aa10.29□□□□□ -0.76
LINC00641-201ENST00000555379 CAMSAP2Q08AD1 1489 aa10.29□□□□□ -0.76
LINC00641-201ENST00000555379 VPS37DQ86XT2 251 aa10.29□□□□□ -0.76
LINC00641-201ENST00000555379 TCEAL9Q9UHQ7 104 aa10.29□□□□□ -0.76
LINC00641-201ENST00000555379 TRDNQ13061 729 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 GNL3LQ9NVN8 582 aaKnown RBP10.28□□□□□ -0.76
LINC00641-201ENST00000555379 NLRP2Q9NX02 1062 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 TRIM6-TRIM34B2RNG4 842 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 MSH5O43196 834 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 MARCH6O60337 910 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 SLC3A2P08195 630 aaKnown RBP10.28□□□□□ -0.76
LINC00641-201ENST00000555379 TAF3Q5VWG9 929 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 SLC4A10Q6U841 1118 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
LINC00641-201ENST00000555379 DIAPH3Q9NSV4 1193 aa10.27□□□□□ -0.77
LINC00641-201ENST00000555379 DHX29Q7Z478 1369 aaKnown RBP10.27□□□□□ -0.77
LINC00641-201ENST00000555379 ERICH2A1L162 156 aa10.27□□□□□ -0.77
LINC00641-201ENST00000555379 IFIT2P09913 472 aaKnown RBP10.27□□□□□ -0.77
LINC00641-201ENST00000555379 ZNF771Q7L3S4 317 aaPredicted RBP10.27□□□□□ -0.77
LINC00641-201ENST00000555379 ABTB2Q8N961 1025 aa10.27□□□□□ -0.77
LINC00641-201ENST00000555379 PRKRIP1Q9H875 184 aaPredicted RBP10.27□□□□□ -0.77
LINC00641-201ENST00000555379 TSPYL4Q9UJ04 414 aa10.27□□□□□ -0.77
LINC00641-201ENST00000555379 TRIM29Q14134 588 aa10.26□□□□□ -0.77
LINC00641-201ENST00000555379 UNC13AQ9UPW8 1703 aa10.26□□□□□ -0.77
LINC00641-201ENST00000555379 ESCO1Q5FWF5 840 aa10.26□□□□□ -0.77
LINC00641-201ENST00000555379 DUOX2Q9NRD8 1548 aa10.26□□□□□ -0.77
LINC00641-201ENST00000555379 UGGT2Q9NYU1 1516 aa10.26□□□□□ -0.77
LINC00641-201ENST00000555379 RAPGEF6Q8TEU7 1601 aa10.26□□□□□ -0.77
LINC00641-201ENST00000555379 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
LINC00641-201ENST00000555379 CFAP74Q9C0B2 1584 aa10.25□□□□□ -0.77
LINC00641-201ENST00000555379 RIPK4P57078 832 aa10.25□□□□□ -0.77
LINC00641-201ENST00000555379 ABCC10Q5T3U5 1492 aa10.25□□□□□ -0.77
LINC00641-201ENST00000555379 CLSTN1O94985 981 aa10.25□□□□□ -0.77
LINC00641-201ENST00000555379 CEP89Q96ST8 783 aa10.25□□□□□ -0.77
LINC00641-201ENST00000555379 PTPN23Q9H3S7 1636 aa10.25□□□□□ -0.77
LINC00641-201ENST00000555379 ABCC11Q96J66 1382 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 AMOTQ4VCS5 1084 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 WDR62O43379 1518 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 WDR7Q9Y4E6 1490 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 RASSF8Q8NHQ8 419 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 TBC1D2BQ9UPU7 963 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 PLCH2O75038 1416 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 XBP1P17861 261 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 ZNF652Q9Y2D9 606 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 RRP9O43818 475 aaKnown RBP10.24□□□□□ -0.77
LINC00641-201ENST00000555379 NOM1Q5C9Z4 860 aaKnown RBP10.24□□□□□ -0.77
LINC00641-201ENST00000555379 ZSCAN25Q6NSZ9 544 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 CADPS2Q86UW7 1296 aa10.24□□□□□ -0.77
LINC00641-201ENST00000555379 CWC22Q9HCG8 908 aaKnown RBP10.24□□□□□ -0.77
LINC00641-201ENST00000555379 PUS7Q96PZ0 661 aaKnown RBP10.23□□□□□ -0.77
LINC00641-201ENST00000555379 PATL2C9JE40 543 aaKnown RBP10.23□□□□□ -0.77
LINC00641-201ENST00000555379 C11orf95C9JLR9 678 aaPredicted RBP10.23□□□□□ -0.77
LINC00641-201ENST00000555379 RIC3Q7Z5B4 369 aa10.23□□□□□ -0.77
LINC00641-201ENST00000555379 DZIP1LQ8IYY4 767 aaKnown RBP10.23□□□□□ -0.77
LINC00641-201ENST00000555379 SKOR2Q2VWA4 1001 aaPredicted RBP10.23□□□□□ -0.77
LINC00641-201ENST00000555379 CCDC61Q9Y6R9 512 aa10.23□□□□□ -0.77
LINC00641-201ENST00000555379 TNRQ92752 1358 aa10.23□□□□□ -0.77
LINC00641-201ENST00000555379 PCF11O94913 1555 aaKnown RBP10.23□□□□□ -0.77
LINC00641-201ENST00000555379 ADAMTS12P58397 1594 aa10.23□□□□□ -0.77
LINC00641-201ENST00000555379 NUP160Q12769 1436 aa10.23□□□□□ -0.77
LINC00641-201ENST00000555379 WDHD1O75717 1129 aaPredicted RBP10.23□□□□□ -0.77
LINC00641-201ENST00000555379 BRMS1Q9HCU9 246 aa10.23□□□□□ -0.77
LINC00641-201ENST00000555379 TPM1P09493 284 aa10.22□□□□□ -0.77
LINC00641-201ENST00000555379 ANKRD20A12PQ8NF67 263 aa10.22□□□□□ -0.77
LINC00641-201ENST00000555379 TEX13AQ9BXU3 409 aaPredicted RBP10.22□□□□□ -0.77
LINC00641-201ENST00000555379 CCDC66A2RUB6 948 aa10.22□□□□□ -0.77
LINC00641-201ENST00000555379 IRX6P78412 446 aaPredicted RBP10.22□□□□□ -0.77
LINC00641-201ENST00000555379 SART3Q15020 963 aaKnown RBP10.22□□□□□ -0.77
LINC00641-201ENST00000555379 HSP90AB3PQ58FF7 597 aa10.22□□□□□ -0.77
LINC00641-201ENST00000555379 TOMM22Q9NS69 142 aa10.22□□□□□ -0.77
LINC00641-201ENST00000555379 CCT4P50991 539 aaKnown RBP10.21□□□□□ -0.77
LINC00641-201ENST00000555379 FKBP5Q13451 457 aaPredicted RBP10.21□□□□□ -0.77
LINC00641-201ENST00000555379 FAM184AQ8NB25 1140 aa10.21□□□□□ -0.77
LINC00641-201ENST00000555379 PRAM1Q96QH2 718 aa10.21□□□□□ -0.77
LINC00641-201ENST00000555379 ARHGEF11O15085 1522 aa10.21□□□□□ -0.78
LINC00641-201ENST00000555379 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.78
LINC00641-201ENST00000555379 SHANK2Q9UPX8 1470 aa10.21□□□□□ -0.78
LINC00641-201ENST00000555379 TPM3P06753 285 aa10.21□□□□□ -0.78
LINC00641-201ENST00000555379 SAFBQ15424 915 aaKnown RBP eCLIP10.21□□□□□ -0.78
LINC00641-201ENST00000555379 WDR63Q8IWG1 891 aa10.21□□□□□ -0.78
LINC00641-201ENST00000555379 PRDM11Q9NQV5 511 aa10.21□□□□□ -0.78
LINC00641-201ENST00000555379 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
LINC00641-201ENST00000555379 PSMA5P28066 241 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
LINC00641-201ENST00000555379 TTC21BQ7Z4L5 1316 aa10.2□□□□□ -0.78
LINC00641-201ENST00000555379 CTTNBP2Q8WZ74 1663 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms